Csor.00g022810 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g022810
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr04: 3529048 .. 3529452 (+)
RNA-Seq Expression	Csor.00g022810
Synteny	Csor.00g022810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTAGCAACTTGATTTCAAGCTTGAACAAAAAATTGCAGGCGGTTGAAATCAGCAATCGCTGCAGACGAACGAAGAAGACGACGACGACGACGACGTACGTTTACAGAGACGATCTGAACAAGAAGAAGCAGTCGCCGTCGTCGCAGCAGCAACCGGAAATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCAGAGACGGAGCCGGTGATAATCGCCATCGATGCAGAGGAGGAAACAGAGAAGAAGAGAGTGGTGAGAATAACGGTGAAAGTAACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGAAGGCGGCGTTCTGGAACTCGGAGATGCGGCTTGTGAGCTCATGCGGATTCCTGCGGCTCGAGTTAGGTCTTCTATGGTGGCCAATTGA

mRNA sequence

ATGATTAGCAACTTGATTTCAAGCTTGAACAAAAAATTGCAGGCGGTTGAAATCAGCAATCGCTGCAGACGAACGAAGAAGACGACGACGACGACGACGTACGTTTACAGAGACGATCTGAACAAGAAGAAGCAGTCGCCGTCGTCGCAGCAGCAACCGGAAATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCAGAGACGGAGCCGGTGATAATCGCCATCGATGCAGAGGAGGAAACAGAGAAGAAGAGAGTGGTGAGAATAACGGTGAAAGTAACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGAAGGCGGCGTTCTGGAACTCGGAGATGCGGCTTGTGAGCTCATGCGGATTCCTGCGGCTCGAGTTAGGTCTTCTATGGTGGCCAATTGA

Coding sequence (CDS)

ATGATTAGCAACTTGATTTCAAGCTTGAACAAAAAATTGCAGGCGGTTGAAATCAGCAATCGCTGCAGACGAACGAAGAAGACGACGACGACGACGACGTACGTTTACAGAGACGATCTGAACAAGAAGAAGCAGTCGCCGTCGTCGCAGCAGCAACCGGAAATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCAGAGACGGAGCCGGTGATAATCGCCATCGATGCAGAGGAGGAAACAGAGAAGAAGAGAGTGGTGAGAATAACGGTGAAAGTAACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGAAGGCGGCGTTCTGGAACTCGGAGATGCGGCTTGTGAGCTCATGCGGATTCCTGCGGCTCGAGTTAGGTCTTCTATGGTGGCCAATTGA

Protein sequence

MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSSQQQPEIKKVKKRVRFAETEPVIIAIDAEEETEKKRVVRITVKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

Homology

[Close]

BLAST of Csor.00g022810 vs. NCBI nr
Match: KAG6600516.1 (hypothetical protein SDJN03_05749, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031155.1 hypothetical protein SDJN02_05195, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 244 bits (623), Expect = 5.07e-81
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSSQQQPEIKKVKK 60
           MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSSQQQPEIKKVKK
Sbjct: 1   MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSSQQQPEIKKVKK 60

Query: 61  RVRFAETEPVIIAIDAEEETEKKRVVRITVKVTKQEANRMLSRCSEGGVLELGDAACELM 120
           RVRFAETEPVIIAIDAEEETEKKRVVRITVKVTKQEANRMLSRCSEGGVLELGDAACELM
Sbjct: 61  RVRFAETEPVIIAIDAEEETEKKRVVRITVKVTKQEANRMLSRCSEGGVLELGDAACELM 120

Query: 121 RIPAARVRSSMVAN 134
           RIPAARVRSSMVAN
Sbjct: 121 RIPAARVRSSMVAN 134

[Close]

BLAST of Csor.00g022810 vs. NCBI nr
Match: XP_038906331.1 (uncharacterized protein LOC120092170 [Benincasa hispida])

HSP 1 Score: 190 bits (483), Expect = 1.26e-59
Identity = 115/143 (80.42%), Postives = 120/143 (83.92%), Query Frame = 0


Query: 1   MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP---SSQQQPEIKK 60
           MISN I SLNKKLQAVEISNRCRRTKKTT    YVYRDDL+KKKQSP   SSQ QPEIKK
Sbjct: 1   MISNFILSLNKKLQAVEISNRCRRTKKTT----YVYRDDLSKKKQSPPPSSSQPQPEIKK 60

Query: 61  VKKRVRFAETEPVIIAI------DAEEETEKKRVVRITVKVTKQEANRMLSRCSEGGVLE 120
           VKKRVRFA+TEPVIIAI        EEETEKK VVRITVK+TK+EANRMLSRCS+GGVLE
Sbjct: 61  VKKRVRFADTEPVIIAITDKEERSTEEETEKK-VVRITVKLTKEEANRMLSRCSDGGVLE 120

Query: 121 LGDAACELMRIPAARVRSSMVAN 134
            GD ACELMRIPA RV SSMVAN
Sbjct: 121 FGDVACELMRIPATRVSSSMVAN 138

[Close]

BLAST of Csor.00g022810 vs. NCBI nr
Match: XP_008451951.1 (PREDICTED: uncharacterized protein LOC103493098 [Cucumis melo] >KAA0044901.1 uncharacterized protein E6C27_scaffold74G001940 [Cucumis melo var. makuwa] >TYK16569.1 uncharacterized protein E5676_scaffold21G003900 [Cucumis melo var. makuwa])

HSP 1 Score: 174 bits (441), Expect = 3.33e-53
Identity = 110/145 (75.86%), Postives = 116/145 (80.00%), Query Frame = 0


Query: 1   MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-E 60
           MISNLISSLNKKLQAVEISNRC+RTKKTT    YVYRDDL KKK SP     S Q QP E
Sbjct: 1   MISNLISSLNKKLQAVEISNRCKRTKKTT----YVYRDDLTKKKHSPPLSSSSPQHQPAE 60

Query: 61  IKKVKKRVRFAETEPVIIAI-----DAEEETEKKRVVRITVKVTKQEANRMLSRCSEGGV 120
           IKKVKKRVRFA+TEPVIIAI     + EEETEKK VVRITVK+TKQEANRMLSRCS  GV
Sbjct: 61  IKKVKKRVRFADTEPVIIAISTDREEEEEETEKK-VVRITVKLTKQEANRMLSRCSNDGV 120

Query: 121 LELGDAACELMRIPAARVRSSMVAN 134
           LE GD A EL+RIP  RV SS+VAN
Sbjct: 121 LEFGDVASELLRIPPTRVSSSLVAN 140

[Close]

BLAST of Csor.00g022810 vs. NCBI nr
Match: XP_022985430.1 (uncharacterized protein LOC111483436 [Cucurbita maxima])

HSP 1 Score: 174 bits (441), Expect = 3.78e-53
Identity = 110/139 (79.14%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 1   MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQ--SPS-SQQQPEIKK 60
           MI NLISSLNKKLQAVEISNRCRRTKKTT     VYR D++KKKQ  SPS SQ +PEI+K
Sbjct: 1   MIGNLISSLNKKLQAVEISNRCRRTKKTTN----VYRRDMSKKKQPQSPSPSQGKPEIEK 60

Query: 61  VKKRVRFAETEPVIIAID-----AEEETEKKRVVRITVKVTKQEANRMLSRCSEGGVLEL 120
           VKKRVRFA+TEPVIIAID      EEETEKK VVRITVK+TKQEANRMLSRCS+GGVLE 
Sbjct: 61  VKKRVRFADTEPVIIAIDREERSTEEETEKK-VVRITVKLTKQEANRMLSRCSDGGVLEF 120

Query: 121 GDAACELMRIPAARVRSSM 131
           GD A ELMRIPAARV SSM
Sbjct: 121 GDVASELMRIPAARVSSSM 134

[Close]

BLAST of Csor.00g022810 vs. NCBI nr
Match: KAG7015140.1 (hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 173 bits (439), Expect = 5.73e-53
Identity = 108/140 (77.14%), Postives = 115/140 (82.14%), Query Frame = 0


Query: 1   MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-SSQQQPEIKKVK 60
           MI NLISSLNKKLQAVEISNRCRRTKKTT     VYR D++KKKQ    SQ +PEI+KVK
Sbjct: 1   MIGNLISSLNKKLQAVEISNRCRRTKKTTN----VYRGDMSKKKQPQLPSQGKPEIEKVK 60

Query: 61  KRVRFAETEPVIIAID-----AEEETEKKRVVRITVKVTKQEANRMLSRCSEGGVLELGD 120
           KRVRFA+TEPVIIAID      EEETEKK VVRITVK+TKQEANRMLSRCS+GGVLE  D
Sbjct: 61  KRVRFADTEPVIIAIDREERSTEEETEKK-VVRITVKLTKQEANRMLSRCSDGGVLEFRD 120

Query: 121 AACELMRIPAARVRSSMVAN 134
            A ELMRIPAARV SSMV N
Sbjct: 121 VASELMRIPAARVSSSMVVN 135

[Close]

BLAST of Csor.00g022810 vs. ExPASy TrEMBL
Match: A0A5D3D246 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003900 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 1.61e-53
Identity = 110/145 (75.86%), Postives = 116/145 (80.00%), Query Frame = 0


Query: 1   MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-E 60
           MISNLISSLNKKLQAVEISNRC+RTKKTT    YVYRDDL KKK SP     S Q QP E
Sbjct: 1   MISNLISSLNKKLQAVEISNRCKRTKKTT----YVYRDDLTKKKHSPPLSSSSPQHQPAE 60

Query: 61  IKKVKKRVRFAETEPVIIAI-----DAEEETEKKRVVRITVKVTKQEANRMLSRCSEGGV 120
           IKKVKKRVRFA+TEPVIIAI     + EEETEKK VVRITVK+TKQEANRMLSRCS  GV
Sbjct: 61  IKKVKKRVRFADTEPVIIAISTDREEEEEETEKK-VVRITVKLTKQEANRMLSRCSNDGV 120

Query: 121 LELGDAACELMRIPAARVRSSMVAN 134
           LE GD A EL+RIP  RV SS+VAN
Sbjct: 121 LEFGDVASELLRIPPTRVSSSLVAN 140

[Close]

BLAST of Csor.00g022810 vs. ExPASy TrEMBL
Match: A0A1S3BS40 (uncharacterized protein LOC103493098 OS=Cucumis melo OX=3656 GN=LOC103493098 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 1.61e-53
Identity = 110/145 (75.86%), Postives = 116/145 (80.00%), Query Frame = 0


Query: 1   MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-E 60
           MISNLISSLNKKLQAVEISNRC+RTKKTT    YVYRDDL KKK SP     S Q QP E
Sbjct: 1   MISNLISSLNKKLQAVEISNRCKRTKKTT----YVYRDDLTKKKHSPPLSSSSPQHQPAE 60

Query: 61  IKKVKKRVRFAETEPVIIAI-----DAEEETEKKRVVRITVKVTKQEANRMLSRCSEGGV 120
           IKKVKKRVRFA+TEPVIIAI     + EEETEKK VVRITVK+TKQEANRMLSRCS  GV
Sbjct: 61  IKKVKKRVRFADTEPVIIAISTDREEEEEETEKK-VVRITVKLTKQEANRMLSRCSNDGV 120

Query: 121 LELGDAACELMRIPAARVRSSMVAN 134
           LE GD A EL+RIP  RV SS+VAN
Sbjct: 121 LEFGDVASELLRIPPTRVSSSLVAN 140

[Close]

BLAST of Csor.00g022810 vs. ExPASy TrEMBL
Match: A0A6J1JBA8 (uncharacterized protein LOC111483436 OS=Cucurbita maxima OX=3661 GN=LOC111483436 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 1.83e-53
Identity = 110/139 (79.14%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 1   MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQ--SPS-SQQQPEIKK 60
           MI NLISSLNKKLQAVEISNRCRRTKKTT     VYR D++KKKQ  SPS SQ +PEI+K
Sbjct: 1   MIGNLISSLNKKLQAVEISNRCRRTKKTTN----VYRRDMSKKKQPQSPSPSQGKPEIEK 60

Query: 61  VKKRVRFAETEPVIIAID-----AEEETEKKRVVRITVKVTKQEANRMLSRCSEGGVLEL 120
           VKKRVRFA+TEPVIIAID      EEETEKK VVRITVK+TKQEANRMLSRCS+GGVLE 
Sbjct: 61  VKKRVRFADTEPVIIAIDREERSTEEETEKK-VVRITVKLTKQEANRMLSRCSDGGVLEF 120

Query: 121 GDAACELMRIPAARVRSSM 131
           GD A ELMRIPAARV SSM
Sbjct: 121 GDVASELMRIPAARVSSSM 134

[Close]

BLAST of Csor.00g022810 vs. ExPASy TrEMBL
Match: A0A6J1EU86 (uncharacterized protein LOC111437608 OS=Cucurbita moschata OX=3662 GN=LOC111437608 PE=4 SV=1)

HSP 1 Score: 172 bits (437), Expect = 9.00e-53
Identity = 107/137 (78.10%), Postives = 114/137 (83.21%), Query Frame = 0


Query: 1   MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-SSQQQPEIKKVK 60
           MI NLISSLNKKLQAVEISNRCRRTKKTT     VYR D++KKKQ    SQ +PEI+KVK
Sbjct: 1   MIGNLISSLNKKLQAVEISNRCRRTKKTTN----VYRGDMSKKKQPQLPSQGKPEIEKVK 60

Query: 61  KRVRFAETEPVIIAID-----AEEETEKKRVVRITVKVTKQEANRMLSRCSEGGVLELGD 120
           KRVRFA+TEPVIIAID      EEETEKK VVRITVK+TKQEANRMLSRCS+GGVLE GD
Sbjct: 61  KRVRFADTEPVIIAIDREERSTEEETEKK-VVRITVKLTKQEANRMLSRCSDGGVLEFGD 120

Query: 121 AACELMRIPAARVRSSM 131
            A ELMRIPAARV SSM
Sbjct: 121 VASELMRIPAARVSSSM 132

[Close]

BLAST of Csor.00g022810 vs. ExPASy TrEMBL
Match: A0A0A0KYE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052080 PE=4 SV=1)

HSP 1 Score: 170 bits (431), Expect = 5.71e-52
Identity = 105/146 (71.92%), Postives = 114/146 (78.08%), Query Frame = 0


Query: 1   MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSS-----QQQPE- 60
           MISNLISSLNKKLQAVEIS+RC+RTKKT     YVYRD+L KK  SP S     Q QPE 
Sbjct: 1   MISNLISSLNKKLQAVEISSRCKRTKKTA----YVYRDNLTKKNHSPPSSSSSPQHQPEE 60

Query: 61  IKKVKKRVRFAETEPVIIAIDAEEETEK------KRVVRITVKVTKQEANRMLSRCSEGG 120
           IKKVKKRVRFA+TEPVIIAI  + E E+      K+VVRITVK+TKQEANRMLSRCS GG
Sbjct: 61  IKKVKKRVRFADTEPVIIAISTDREEEELEVETEKKVVRITVKLTKQEANRMLSRCSNGG 120

Query: 121 VLELGDAACELMRIPAARVRSSMVAN 134
           VLE GD A ELMRIP  RVRSS+VAN
Sbjct: 121 VLEFGDVASELMRIPPTRVRSSLVAN 142

The following BLAST results are available for this feature:

BLAST of Csor.00g022810 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g022810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600516.1	5.07e-81	100.00	hypothetical protein SDJN03_05749, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038906331.1	1.26e-59	80.42	uncharacterized protein LOC120092170 [Benincasa hispida]	[more]
XP_008451951.1	3.33e-53	75.86	PREDICTED: uncharacterized protein LOC103493098 [Cucumis melo] >KAA0044901.1 unc...	[more]
XP_022985430.1	3.78e-53	79.14	uncharacterized protein LOC111483436 [Cucurbita maxima]	[more]
KAG7015140.1	5.73e-53	77.14	hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Csor.00g022810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D246	1.61e-53	75.86	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BS40	1.61e-53	75.86	uncharacterized protein LOC103493098 OS=Cucumis melo OX=3656 GN=LOC103493098 PE=...	[more]
A0A6J1JBA8	1.83e-53	79.14	uncharacterized protein LOC111483436 OS=Cucurbita maxima OX=3661 GN=LOC111483436...	[more]
A0A6J1EU86	9.00e-53	78.10	uncharacterized protein LOC111437608 OS=Cucurbita moschata OX=3662 GN=LOC1114376...	[more]
A0A0A0KYE1	5.71e-52	71.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052080 PE=4 SV=1	[more]

BLAST of Csor.00g022810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..59
None	No IPR available	PANTHER	PTHR36782:SF1	BNAC03G62080D PROTEIN	coord: 1..132
None	No IPR available	PANTHER	PTHR36782	BNAC03G62080D PROTEIN	coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g022810.m01	Csor.00g022810.m01	mRNA