Csor.00g022560 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g022560
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4
Location	Csor_Chr04: 3396266 .. 3400171 (-)
RNA-Seq Expression	Csor.00g022560
Synteny	Csor.00g022560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCAAGATTGTTCAGATTCGCATTCCTAATTGAGCACGGTGGAAGGCTGAAGATTGGAACGGTATTCTTTGCCGTGAGGATTTTGTTTGAGAATTTCGAGGTATAATTCATTCTACTTCGAAGATTTTTTGTACCCTAATTTATCACCATTTTGAATTTCATTGGAATTTTCTTTCAAGTAATTCGTGTGTGATCAGAGAGTATTTTCAAGTTCCGACTTGTTTCGTATTTTCGAGTAAAATGTTATTTCTCGCTTCCGAATTCCATCTTCTTTTCTAGCGAGCAAGATATTTTTGTTTGTTTTCTTTTCTTTTCAAGTTGATTGCTATTTGTTAATGTATTAGCTCCTAATCTAGAAATTATTTTTGATCCAGTTACCCTTGTGATATTTAGGATTTCCACCCTTTCCTCCTTACATTTGTGTAAAAAAGGTCGAGGTAGAAAACAGAGAATGATGTTGAGATCTTCGTTTCTTTATCAAAAAGTTTGGAACTATCGATTAAACCCTGCTAGCTTCCCCATTTTTTTTTTTTTTTTTTTTGTTTGATTAATTTGAATTTTATTAGTTATACTCATTTCTCGATAGCACCATTTATTACTATAATTTAAATTATATCTCTTCATGAACTTCAGAACACGAGGTACAATAAATCGTAGGTTTTTTTTTGTCCTCTAATAGAAGCTTTGAAGGATTTTTGTGCCTTCAGCGGGCCCAATGTTTCCGGCAATTGCAAATGGTTTCTTGTATCTCTTCATGTTCAAAAAACAAGATTTTTTTAGAAAATATGCCAGTCCTGTCAATTTTTTATGTGGACTGGAATTTTAGATATATAATACACGCAGAGAAAAATAGAATTGTGAAGGGAACAAGTACAGCTGTTGCAGTCAAGTTCTTTCGCTGGTATCTTATATGTTCATTGCATAGAGCTCGGCTTATCCTTCTGCTCCTGAGTACATCATAAAACAATAATATCCGATTTAGATTACGAGTTCCTGTTTCTGTCTAGCAACCACTTTACCGATGTTAGGTCCTATTCGTTCCACTCCGATGAATTTTTGCCCTGTTAACTATGTGGCTCTAGAACCTGTAGAAGAAATGCTGTTTTGCTGATCTTTTTTTGAACTATATGGGACAACATTGAATTTCGGTATGAGAAGACCGAATTATTTCTATATCCATTATTTCGATGGTAAGTGATTCGTGTTAAGCCAAAACCACCAGATTCCTTTTAGCACGTAGAATCTTTAGAAGAAGTGTCTTCCTGGACAGGGTGGAAGCCATCCATTGATATTCTTTTACCATCCAGAAGTGCTTCTGGTATTCACATTTATAAACTTCATGCATAATTTGAAGCCTATTGATAGCAGTCAAAAAGTTGTTCTGTTTGATTTATGGACTAAAAGCAAACAATGAAAGCTTGGATCCTTGAATTAACTTAAACTCCTTTGATAACCATTTAGTTTTTAGTTTTTGTTTTTTTTATTTTAATTAAACATATAAATACTACTTTCATCTATGAGTTTCTTTGTTTCTTTTCTATTTTTTTAACATGTTTTAGAAAACTAAGCTAAGTTTTGAATTTTTTTTCTTTTAAAAGTTGACTAGGAACGTCTTTTCTCCTTTCAATTTCTAATCAACTGAGAAAAGGGAACCAAATAACTAACATCACAGTCACTCAAATAGTTTAGCATCTTTACGTGGTTTAGAACTTCTGATTGCCTAATTTCCTTCATTATTTAAACTTGGTGTTTAGAATCTGAAGTGCTATCGTCTATCAATGCCGTGATATGGCTTTAATTTTAACGAATGATCAGTGGTTCATTTGTCAAGCTATATGATATAGCAATGATCTGCTAGGAACAACAAAGATAACCTTCGCGAATTTCTTTCTGCACAAATGCTTTTAAGGTCTTTGAAATCTGAGCACCGTTGTATAACGACCCTCCTGCCTGTGATTTTCATAACAGGGTCTATGATTTCTCTAGTATTCCATGGCGTTAGAGGTTACTTCTGAAGGTTAATAATGAAATGCAATGCTTGCTGGAGAGAACTTGAAGGGCGAGCTATCTCCACAACTTGCGGTCACTTGTTGTGTATCCTAAGCATGTGGAAAATTTTCATTGTCTATCGTTTAATTTGGTGAAATATTTGACCTATTTCTCTAAGTAAATGTAAGTTGTTTAACTGCATCAATTGTTTCTTAACGGTGTAAAGGCACAGAGGATGCAAGCAAGATCCTTAGCAATGATGGAGCCTGCCCCATTTGTGATCAAGTTCTTTCTAAAAGGTGATGGGTTTATTATTATTATGATGCTATTTGGAGCCTACCCCATCGATAATATGATTTTATTTTATCTTACTTCCGATTTCTATTTGGCAGCCTCATGAAACCCGTGGACATCAATCCAAATGATGAATGGGTAAATGTAAGTATTCTCTTAAATTATCTTGTTCAAGTCTTTTAAGACTCTTATAGCGTTTTTCAATCTTTTCCCTGTATGTGACTGATTCGTTGTATTGTCTCACTGCTTTTGATACTGATATTCACTACAAAAAATATTACAGATGGCCATGGCTGGTATAAATCCTCAGATATGTATCCTTCTGAGTAATCACCAGTGATTCAAAATTCTAACAATTAGTGATAAATTATCCTCCAAATTTTGGAAAACGCTGTTATTCCATTCTTTTTAACAGTTGAGAAGATAGATTGTCTTTAGTTTTCCTTGATTGGTCTCAGTGATGAAAAGTGCATATAGAAGTGTAATGTTCTATATTGGACAAAAGGAATTGGAGATGCAGTACAAAATGAACAGAATTGTGGCTCAATGCCGACAGAAATGTGAAGTTGTGCAAGAAAAGTTTACTGAAAAACTGGAGCAGGTGCATACTGCATACCAAAAAATGGCCAAGAGATGCCAGATGATGGAACGAGAGATGGAGAATATATCCAAAGACAAACAAGAGCTCCAGGAGAAGTTTGCTGAAAAATCTAGGTCATCTCCTTTCATTTTTGCTTCTCATTTCTAAACCGATTCCTGAGGGGTATTCTCTGTTTTTAAGATCCTGATCCAGAAAATTCAATTGCATGTTAGGCAGAAGAGGAAACTAGATGAGATGTATGATCAATTGAGGAATGAGCATGAATCACTAAAACGGTCGGCCATCCAGCCTGTGAGCAATTTTTATCCAAGAAACGAGCCCGATTTGTTCTCAAACCCCGTTAGTTTGATGGATAACAGAGAACCCATGAGGAAAGGTAATCTTTTTCTCTTTCTAATTTTAAAGAATGAAAACTTCAGACAATTGATACTTTCATCATGTCGAGTTTTCAATTTATACCATGTATTATCGAGTGGAATTCAAACCATGCTCTCATTTCTCACATACGCACAGCTTAATTACGTCCTGTACTGCTCAAGTATTTCCAAAACAAGTTGACTTATTTCTTGCAGACTTGCTGGTTTCCGCTCCTGAAACCCCAGGACCAAGAGAGGAAATATGGCCAACACGACAAAATAGCGGGAACTCTGGTCACTTCGACATCTCCGTTGGGTCACCGGCAAAACAAGCTGCTCCGATGGCAATGGAAGCTGGGAATAGAAGAGGTGCAGCTCACAATGCGTTTGGAAGTGGAGCTGGCAACCCCTCCATGACTCTGCGCAACTTGATTCTGTCCCCAATCAAACGACCTCAGCTCTCACGTCGCCCTCAAATGTTCACGTAAGTATATATAACGCTTGCTTTTCGGTGCTTCTTTACAAAGAGTTCATACCAATTACTAAGGACTATGCTGATATCGGCAAATAACTCTTGTTTACATGAAATTTAAGCTCAAACTTTCTCCTGCATGCTCTCGCACTAGCTGAATCATATTATTACTGTCATTATAGATTGTGA

mRNA sequence

ATGTTCTCAAGATTGTTCAGATTCGCATTCCTAATTGAGCACGGTGGAAGGCTGAAGATTGGAACGGTATTCTTTGCCGTGAGGATTTTGTTTGAGAATTTCGAGGCACAGAGGATGCAAGCAAGATCCTTAGCAATGATGGAGCCTGCCCCATTTGTGATCAAGTTCTTTCTAAAAGTGATGAAAAGTGCATATAGAAGTGTAATGTTCTATATTGGACAAAAGGAATTGGAGATGCAGTACAAAATGAACAGAATTGTGGCTCAATGCCGACAGAAATGTGAAGTTGTGCAAGAAAAGTTTACTGAAAAACTGGAGCAGGTGCATACTGCATACCAAAAAATGGCCAAGAGATGCCAGATGATGGAACGAGAGATGGAGAATATATCCAAAGACAAACAAGAGCTCCAGGAGAAGTTTGCTGAAAAATCTAGGCAGAAGAGGAAACTAGATGAGATGTATGATCAATTGAGGAATGAGCATGAATCACTAAAACGGTCGGCCATCCAGCCTGTGAGCAATTTTTATCCAAGAAACGAGCCCGATTTGTTCTCAAACCCCGTTAGTTTGATGGATAACAGAGAACCCATGAGGAAAGGACCAAGAGAGGAAATATGGCCAACACGACAAAATAGCGGGAACTCTGGTCACTTCGACATCTCCGTTGGGTCACCGGCAAAACAAGCTGCTCCGATGGCAATGGAAGCTGGGAATAGAAGAGGTGCAGCTCACAATGCGTTTGGAAGTGGAGCTGGCAACCCCTCCATGACTCTGCGCAACTTGATTCTGTCCCCAATCAAACGACCTCAGCTCTCACGTCGCCCTCAAATGTTCACATTGTGA

Coding sequence (CDS)

ATGTTCTCAAGATTGTTCAGATTCGCATTCCTAATTGAGCACGGTGGAAGGCTGAAGATTGGAACGGTATTCTTTGCCGTGAGGATTTTGTTTGAGAATTTCGAGGCACAGAGGATGCAAGCAAGATCCTTAGCAATGATGGAGCCTGCCCCATTTGTGATCAAGTTCTTTCTAAAAGTGATGAAAAGTGCATATAGAAGTGTAATGTTCTATATTGGACAAAAGGAATTGGAGATGCAGTACAAAATGAACAGAATTGTGGCTCAATGCCGACAGAAATGTGAAGTTGTGCAAGAAAAGTTTACTGAAAAACTGGAGCAGGTGCATACTGCATACCAAAAAATGGCCAAGAGATGCCAGATGATGGAACGAGAGATGGAGAATATATCCAAAGACAAACAAGAGCTCCAGGAGAAGTTTGCTGAAAAATCTAGGCAGAAGAGGAAACTAGATGAGATGTATGATCAATTGAGGAATGAGCATGAATCACTAAAACGGTCGGCCATCCAGCCTGTGAGCAATTTTTATCCAAGAAACGAGCCCGATTTGTTCTCAAACCCCGTTAGTTTGATGGATAACAGAGAACCCATGAGGAAAGGACCAAGAGAGGAAATATGGCCAACACGACAAAATAGCGGGAACTCTGGTCACTTCGACATCTCCGTTGGGTCACCGGCAAAACAAGCTGCTCCGATGGCAATGGAAGCTGGGAATAGAAGAGGTGCAGCTCACAATGCGTTTGGAAGTGGAGCTGGCAACCCCTCCATGACTCTGCGCAACTTGATTCTGTCCCCAATCAAACGACCTCAGCTCTCACGTCGCCCTCAAATGTTCACATTGTGA

Protein sequence

MFSRLFRFAFLIEHGGRLKIGTVFFAVRILFENFEAQRMQARSLAMMEPAPFVIKFFLKVMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRCQMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNEPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNRRGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL

Homology

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BLAST of Csor.00g022560 vs. ExPASy Swiss-Prot
Match: F4HRI2 (E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Arabidopsis thaliana OX=3702 GN=HEI10 PE=2 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.1e-77
Identity = 163/236 (69.07%), Postives = 191/236 (80.93%), Query Frame = 0


Query: 60  VMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 119
           +MKSAYRSVMFYI Q++LEMQYKMNR+VAQCRQKCE +Q KF+EK+EQVHTAYQKM KRC
Sbjct: 74  LMKSAYRSVMFYIAQRDLEMQYKMNRVVAQCRQKCEGMQAKFSEKMEQVHTAYQKMGKRC 133

Query: 120 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 179
           QMME+E+EN++KDKQELQEKF+EKSRQKRKLDEMYDQLR+E+ES+KR+AIQP +NFYPR+
Sbjct: 134 QMMEQEVENLTKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESVKRTAIQPANNFYPRH 193

Query: 180 -EPDLFSNP-VSLMDNREPMRK----------GPREEIWPTRQNSGNSGHFDISVGSPAK 239
            EPD FSNP V++M+NRE +RK          GP++EIWP RQNS NSG FDIS  SPA 
Sbjct: 194 QEPDFFSNPAVNMMENRETIRKDRSFFSPATPGPKDEIWPARQNSSNSGPFDISTDSPA- 253

Query: 240 QAAPMAMEAGNRR-GAAHNAF-GSGAGNPSMTLRNLILSPIKRPQLSR-RPQMFTL 281
               +  + GNRR G  H  + G G  NP  TLRNLILSPIKR QLSR RPQ+FTL
Sbjct: 254 ----IPSDLGNRRAGRGHPVYGGGGTANPQSTLRNLILSPIKRSQLSRSRPQLFTL 304

[Close]

BLAST of Csor.00g022560 vs. ExPASy Swiss-Prot
Match: I6PL68 (E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=HEI10 PE=1 SV=2)

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-71
Identity = 151/232 (65.09%), Postives = 180/232 (77.59%), Query Frame = 0


Query: 60  VMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 119
           +MKSAYRSVMFYIGQKELEMQYKMNRIV QCRQKCE++Q KFTEKLE+VHTAYQKMAK+C
Sbjct: 74  LMKSAYRSVMFYIGQKELEMQYKMNRIVGQCRQKCELMQAKFTEKLEEVHTAYQKMAKKC 133

Query: 120 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 179
           Q+ME+E+EN+S+DKQELQEKFAEKSRQKRKLDEMYDQLR+E+ES KRSAIQP +N++PR 
Sbjct: 134 QLMEQEVENLSRDKQELQEKFAEKSRQKRKLDEMYDQLRSEYESAKRSAIQPANNYFPRA 193

Query: 180 EPDLFSNPVSLMDNREPMRK---------GPREEIW--PTRQNSGNSGHFDISVGSPAKQ 239
           +PDLFS   ++MD+ +P+R+         G R+E W  P RQ    SG F++S GSPA  
Sbjct: 194 QPDLFSGVPNIMDSSDPLRQGLAGLPETPGRRDEGWAPPPRQRRSTSGPFELSAGSPAHN 253

Query: 240 AAPMAMEAGNRRGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSR-RPQMFT 280
           AAP        R  A   FG+   N S  LRN+I+SP+KRPQLSR RP MFT
Sbjct: 254 AAPPV--DIRPRQPARPVFGTAMNNTSAALRNMIISPVKRPQLSRNRPHMFT 303

[Close]

BLAST of Csor.00g022560 vs. NCBI nr
Match: KAG6600491.1 (E3 ubiquitin-protein ligase CCNB1IP1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 537 bits (1384), Expect = 3.24e-192
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MFSRLFRFAFLIEHGGRLKIGTVFFAVRILFENFEAQRMQARSLAMMEPAPFVIKFFLKV 60
           MFSRLFRFAFLIEHGGRLKIGTVFFAVRILFENFEAQRMQARSLAMMEPAPFVIKFFLKV
Sbjct: 1   MFSRLFRFAFLIEHGGRLKIGTVFFAVRILFENFEAQRMQARSLAMMEPAPFVIKFFLKV 60

Query: 61  MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRCQ 120
           MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRCQ
Sbjct: 61  MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRCQ 120

Query: 121 MMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNE 180
           MMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNE
Sbjct: 121 MMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRNE 180

Query: 181 PDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNRR 240
           PDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNRR
Sbjct: 181 PDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNRR 240

Query: 241 GAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 280
           GAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL
Sbjct: 241 GAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 280

[Close]

BLAST of Csor.00g022560 vs. NCBI nr
Match: KAG7031132.1 (E3 ubiquitin-protein ligase CCNB1IP1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426 bits (1094), Expect = 5.11e-148
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 60  VMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 119
           +MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC
Sbjct: 61  MMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 120

Query: 120 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 179
           QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN
Sbjct: 121 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 180

Query: 180 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 239
           EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR
Sbjct: 181 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 240

Query: 240 RGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 280
           RGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL
Sbjct: 241 RGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 281

[Close]

BLAST of Csor.00g022560 vs. NCBI nr
Match: XP_022942642.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Cucurbita moschata] >XP_022982093.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Cucurbita maxima])

HSP 1 Score: 423 bits (1087), Expect = 9.44e-147
Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 60  VMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 119
           +MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEV+QEKFTEKLEQVHTAYQKMAKRC
Sbjct: 74  LMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLEQVHTAYQKMAKRC 133

Query: 120 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 179
           QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN
Sbjct: 134 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 193

Query: 180 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 239
           EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR
Sbjct: 194 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 253

Query: 240 RGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 280
           RG AHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL
Sbjct: 254 RGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 294

[Close]

BLAST of Csor.00g022560 vs. NCBI nr
Match: XP_022942643.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Cucurbita moschata] >XP_022982100.1 E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Cucurbita maxima])

HSP 1 Score: 422 bits (1084), Expect = 2.61e-146
Identity = 217/220 (98.64%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 60  VMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 119
           +MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEV+QEKFTEKLEQVHTAYQKMAKRC
Sbjct: 74  LMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLEQVHTAYQKMAKRC 133

Query: 120 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 179
           QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN
Sbjct: 134 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 193

Query: 180 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 239
           EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR
Sbjct: 194 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 253

Query: 240 RGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT 279
           RG AHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
Sbjct: 254 RGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT 293

[Close]

BLAST of Csor.00g022560 vs. NCBI nr
Match: XP_023550926.1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422 bits (1084), Expect = 2.70e-146
Identity = 217/221 (98.19%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 60  VMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 119
           +MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEV+QEKFTEKLEQVHTAYQKMAKRC
Sbjct: 74  LMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLEQVHTAYQKMAKRC 133

Query: 120 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 179
           QM+EREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN
Sbjct: 134 QMLEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 193

Query: 180 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 239
           EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR
Sbjct: 194 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 253

Query: 240 RGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 280
           RG AHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL
Sbjct: 254 RGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 294

[Close]

BLAST of Csor.00g022560 vs. ExPASy TrEMBL
Match: A0A6J1J3Z1 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111481027 PE=4 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 4.57e-147
Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 60  VMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 119
           +MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEV+QEKFTEKLEQVHTAYQKMAKRC
Sbjct: 74  LMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLEQVHTAYQKMAKRC 133

Query: 120 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 179
           QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN
Sbjct: 134 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 193

Query: 180 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 239
           EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR
Sbjct: 194 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 253

Query: 240 RGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 280
           RG AHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL
Sbjct: 254 RGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 294

[Close]

BLAST of Csor.00g022560 vs. ExPASy TrEMBL
Match: A0A6J1FQU4 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111447617 PE=4 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 4.57e-147
Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 60  VMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 119
           +MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEV+QEKFTEKLEQVHTAYQKMAKRC
Sbjct: 74  LMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLEQVHTAYQKMAKRC 133

Query: 120 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 179
           QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN
Sbjct: 134 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 193

Query: 180 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 239
           EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR
Sbjct: 194 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 253

Query: 240 RGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 280
           RG AHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL
Sbjct: 254 RGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 294

[Close]

BLAST of Csor.00g022560 vs. ExPASy TrEMBL
Match: A0A6J1J1N8 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111481027 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 1.26e-146
Identity = 217/220 (98.64%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 60  VMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 119
           +MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEV+QEKFTEKLEQVHTAYQKMAKRC
Sbjct: 74  LMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLEQVHTAYQKMAKRC 133

Query: 120 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 179
           QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN
Sbjct: 134 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 193

Query: 180 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 239
           EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR
Sbjct: 194 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 253

Query: 240 RGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT 279
           RG AHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
Sbjct: 254 RGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT 293

[Close]

BLAST of Csor.00g022560 vs. ExPASy TrEMBL
Match: A0A6J1FVB6 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111447617 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 1.26e-146
Identity = 217/220 (98.64%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 60  VMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 119
           +MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEV+QEKFTEKLEQVHTAYQKMAKRC
Sbjct: 74  LMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLEQVHTAYQKMAKRC 133

Query: 120 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 179
           QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN
Sbjct: 134 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 193

Query: 180 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 239
           EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR
Sbjct: 194 EPDLFSNPVSLMDNREPMRKGPREEIWPTRQNSGNSGHFDISVGSPAKQAAPMAMEAGNR 253

Query: 240 RGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT 279
           RG AHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT
Sbjct: 254 RGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFT 293

[Close]

BLAST of Csor.00g022560 vs. ExPASy TrEMBL
Match: A0A6J1J1K9 (E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481027 PE=4 SV=1)

HSP 1 Score: 415 bits (1066), Expect = 1.02e-143
Identity = 218/231 (94.37%), Postives = 220/231 (95.24%), Query Frame = 0


Query: 60  VMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 119
           +MKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEV+QEKFTEKLEQVHTAYQKMAKRC
Sbjct: 74  LMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVMQEKFTEKLEQVHTAYQKMAKRC 133

Query: 120 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 179
           QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN
Sbjct: 134 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 193

Query: 180 EPDLFSNPVSLMDNREPMRK----------GPREEIWPTRQNSGNSGHFDISVGSPAKQA 239
           EPDLFSNPVSLMDNREPMRK          GPREEIWPTRQNSGNSGHFDISVGSPAKQA
Sbjct: 194 EPDLFSNPVSLMDNREPMRKDLLVSAPETPGPREEIWPTRQNSGNSGHFDISVGSPAKQA 253

Query: 240 APMAMEAGNRRGAAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 280
           APMAMEAGNRRG AHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL
Sbjct: 254 APMAMEAGNRRGGAHNAFGSGAGNPSMTLRNLILSPIKRPQLSRRPQMFTL 304

[Close]

BLAST of Csor.00g022560 vs. TAIR 10
Match: AT1G53490.1 (RING/U-box superfamily protein )

HSP 1 Score: 290.4 bits (742), Expect = 1.5e-78
Identity = 163/236 (69.07%), Postives = 191/236 (80.93%), Query Frame = 0


Query: 60  VMKSAYRSVMFYIGQKELEMQYKMNRIVAQCRQKCEVVQEKFTEKLEQVHTAYQKMAKRC 119
           +MKSAYRSVMFYI Q++LEMQYKMNR+VAQCRQKCE +Q KF+EK+EQVHTAYQKM KRC
Sbjct: 74  LMKSAYRSVMFYIAQRDLEMQYKMNRVVAQCRQKCEGMQAKFSEKMEQVHTAYQKMGKRC 133

Query: 120 QMMEREMENISKDKQELQEKFAEKSRQKRKLDEMYDQLRNEHESLKRSAIQPVSNFYPRN 179
           QMME+E+EN++KDKQELQEKF+EKSRQKRKLDEMYDQLR+E+ES+KR+AIQP +NFYPR+
Sbjct: 134 QMMEQEVENLTKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESVKRTAIQPANNFYPRH 193

Query: 180 -EPDLFSNP-VSLMDNREPMRK----------GPREEIWPTRQNSGNSGHFDISVGSPAK 239
            EPD FSNP V++M+NRE +RK          GP++EIWP RQNS NSG FDIS  SPA 
Sbjct: 194 QEPDFFSNPAVNMMENRETIRKDRSFFSPATPGPKDEIWPARQNSSNSGPFDISTDSPA- 253

Query: 240 QAAPMAMEAGNRR-GAAHNAF-GSGAGNPSMTLRNLILSPIKRPQLSR-RPQMFTL 281
               +  + GNRR G  H  + G G  NP  TLRNLILSPIKR QLSR RPQ+FTL
Sbjct: 254 ----IPSDLGNRRAGRGHPVYGGGGTANPQSTLRNLILSPIKRSQLSRSRPQLFTL 304

The following BLAST results are available for this feature:

BLAST of Csor.00g022560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HRI2	2.1e-77	69.07	E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Arabidopsis thaliana OX=3702 GN=...	[more]
I6PL68	1.3e-71	65.09	E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of Csor.00g022560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600491.1	3.24e-192	100.00	E3 ubiquitin-protein ligase CCNB1IP1-like protein, partial [Cucurbita argyrosper...	[more]
KAG7031132.1	5.11e-148	99.55	E3 ubiquitin-protein ligase CCNB1IP1-like protein, partial [Cucurbita argyrosper...	[more]
XP_022942642.1	9.44e-147	98.64	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Cucurbita moschata] >XP...	[more]
XP_022942643.1	2.61e-146	98.64	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 [Cucurbita moschata] >XP...	[more]
XP_023550926.1	2.70e-146	98.19	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 [Cucurbita pepo subsp. p...	[more]

BLAST of Csor.00g022560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J3Z1	4.57e-147	98.64	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 OS=Cucurbita maxima OX=3...	[more]
A0A6J1FQU4	4.57e-147	98.64	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X3 OS=Cucurbita moschata OX...	[more]
A0A6J1J1N8	1.26e-146	98.64	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 OS=Cucurbita maxima OX=3...	[more]
A0A6J1FVB6	1.26e-146	98.64	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X4 OS=Cucurbita moschata OX...	[more]
A0A6J1J1K9	1.02e-143	94.37	E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 OS=Cucurbita maxima OX=3...	[more]

BLAST of Csor.00g022560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53490.1	1.5e-78	69.07	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..217
None	No IPR available	PANTHER	PTHR47384	E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG	coord: 53..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g022560.m01	Csor.00g022560.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051026	chiasma assembly
cellular_component	GO:0005694	chromosome
cellular_component	GO:0005634	nucleus