Csor.00g022500 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g022500
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	60S ribosomal protein L10
Location	Csor_Chr04: 3369882 .. 3370544 (+)
RNA-Seq Expression	Csor.00g022500
Synteny	Csor.00g022500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGAAGACCTGCTAGATGTTACCGACAGATTAAAAACAAACCGTACCCTAAGTCACGATTTTGCCGTGGTGTACCTGATCCTAAGATCAGGATCTATGACGTCGGAATGAAAAGGAAAGGAGTAGATGAATTTCCATTCTGTGTCCACCTCGTGAGTTGGGAGAAAGAAAACGTGTCAAGTGAAGCTTTAGAAGCAGCTAGGATTGCCTGCAATAAGTACATGACCAAGTTTGCTGGGAAGGATGCATTCCATTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGCATGAGAGGTGCCTTTGGGAAACCACAGGGAACCTGTGCGAGAGTGGCCATTGGGCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAACGGTCAGAACGCACAGGAGGCCCTCCGCCGTGCTAAGTTCAAGTTCCCTGGTCGTCAAAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAATTCAGCCGAGCTGATTACCTGAAATTCAAGGCAGAGAACAAGATTCTTCCAGATGGTGTGAATGCCAAGCTTCTTGGATGCCATGGGCCTCTAGCCAACCGTCAGCCTGGAAGAGCTTTTCTGTCTCAAGCTGCTTAG

mRNA sequence

ATGGGGAGAAGACCTGCTAGATGTTACCGACAGATTAAAAACAAACCGTACCCTAAGTCACGATTTTGCCGTGGTGTACCTGATCCTAAGATCAGGATCTATGACGTCGGAATGAAAAGGAAAGGAGTAGATGAATTTCCATTCTGTGTCCACCTCGTGAGTTGGGAGAAAGAAAACGTGTCAAGTGAAGCTTTAGAAGCAGCTAGGATTGCCTGCAATAAGTACATGACCAAGTTTGCTGGGAAGGATGCATTCCATTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGCATGAGAGGTGCCTTTGGGAAACCACAGGGAACCTGTGCGAGAGTGGCCATTGGGCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAACGGTCAGAACGCACAGGAGGCCCTCCGCCGTGCTAAGTTCAAGTTCCCTGGTCGTCAAAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAATTCAGCCGAGCTGATTACCTGAAATTCAAGGCAGAGAACAAGATTCTTCCAGATGGTGTGAATGCCAAGCTTCTTGGATGCCATGGGCCTCTAGCCAACCGTCAGCCTGGAAGAGCTTTTCTGTCTCAAGCTGCTTAG

Coding sequence (CDS)

ATGGGGAGAAGACCTGCTAGATGTTACCGACAGATTAAAAACAAACCGTACCCTAAGTCACGATTTTGCCGTGGTGTACCTGATCCTAAGATCAGGATCTATGACGTCGGAATGAAAAGGAAAGGAGTAGATGAATTTCCATTCTGTGTCCACCTCGTGAGTTGGGAGAAAGAAAACGTGTCAAGTGAAGCTTTAGAAGCAGCTAGGATTGCCTGCAATAAGTACATGACCAAGTTTGCTGGGAAGGATGCATTCCATTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGGATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAAACTGGCATGAGAGGTGCCTTTGGGAAACCACAGGGAACCTGTGCGAGAGTGGCCATTGGGCAGGTTCTCCTTTCAGTTCGCTGCAAGGACAACAACGGTCAGAACGCACAGGAGGCCCTCCGCCGTGCTAAGTTCAAGTTCCCTGGTCGTCAAAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAATTCAGCCGAGCTGATTACCTGAAATTCAAGGCAGAGAACAAGATTCTTCCAGATGGTGTGAATGCCAAGCTTCTTGGATGCCATGGGCCTCTAGCCAACCGTCAGCCTGGAAGAGCTTTTCTGTCTCAAGCTGCTTAG

Protein sequence

MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA

Homology

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BLAST of Csor.00g022500 vs. ExPASy Swiss-Prot
Match: Q9M5M7 (60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 3.9e-119
Identity = 203/220 (92.27%), Postives = 210/220 (95.45%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQG CARVAIGQVLLSVRCKDNN  NAQEALRRAKFKFPGRQKIIVSRKWGFTK +RAD
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 221
           Y + K+EN+ILPDGVNAKLLGCHG LANR+PGRAF+   A
Sbjct: 181 YPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAFIDAVA 220

[Close]

BLAST of Csor.00g022500 vs. ExPASy Swiss-Prot
Match: P93847 (60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 8.8e-119
Identity = 204/219 (93.15%), Postives = 210/219 (95.89%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTK AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQG CARVAIGQVLLSVRCKD N  +AQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQA 220
           YLK+K+EN+I+PDGVNAKLLG HGPLA RQPGRAFLS +
Sbjct: 181 YLKYKSENRIVPDGVNAKLLGNHGPLAARQPGRAFLSSS 219

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BLAST of Csor.00g022500 vs. ExPASy Swiss-Prot
Match: Q9SPB3 (60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.1e-118
Identity = 198/217 (91.24%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARV+IGQVLLSVRCKD N  +AQEALRRAKFKFP RQKIIVSRKWGFTKF+R D
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLS 218
           Y+K+K++N+ILPDGVNAKLLGCHGPLANRQPG+AF++
Sbjct: 181 YIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFIN 217

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BLAST of Csor.00g022500 vs. ExPASy Swiss-Prot
Match: Q08770 (60S ribosomal protein L10-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10B PE=2 SV=2)

HSP 1 Score: 411.4 bits (1056), Expect = 6.5e-114
Identity = 195/220 (88.64%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMKRKGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 221
           Y K + E +I+PDGVNAK L CHGPLANRQPG AFLS  A
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLSAGA 220

[Close]

BLAST of Csor.00g022500 vs. ExPASy Swiss-Prot
Match: Q93VT9 (60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 5.5e-113
Identity = 192/216 (88.89%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 217
           + K + E +++PDGVNAK L CHGPLANRQPG AFL
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFL 216

[Close]

BLAST of Csor.00g022500 vs. NCBI nr
Match: XP_022942137.1 (60S ribosomal protein L10-like isoform X2 [Cucurbita moschata] >XP_022942138.1 60S ribosomal protein L10-like isoform X2 [Cucurbita moschata] >XP_023526268.1 60S ribosomal protein L10-like [Cucurbita pepo subsp. pepo] >XP_023526277.1 60S ribosomal protein L10-like [Cucurbita pepo subsp. pepo] >KAG6600485.1 60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 456 bits (1172), Expect = 6.61e-162
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220
           YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA
Sbjct: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220

[Close]

BLAST of Csor.00g022500 vs. NCBI nr
Match: XP_022942135.1 (60S ribosomal protein L10-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 456 bits (1172), Expect = 1.42e-161
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV
Sbjct: 22  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 81

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 82  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 141

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 142 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 201

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220
           YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA
Sbjct: 202 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 241

[Close]

BLAST of Csor.00g022500 vs. NCBI nr
Match: XP_022982620.1 (60S ribosomal protein L10 [Cucurbita maxima] >XP_022982629.1 60S ribosomal protein L10 [Cucurbita maxima])

HSP 1 Score: 453 bits (1166), Expect = 5.43e-161
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220
           YLK KAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA
Sbjct: 181 YLKLKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220

[Close]

BLAST of Csor.00g022500 vs. NCBI nr
Match: XP_004137249.1 (60S ribosomal protein L10 [Cucumis sativus] >KAE8649248.1 hypothetical protein Csa_015270 [Cucumis sativus])

HSP 1 Score: 450 bits (1157), Expect = 1.28e-159
Identity = 217/220 (98.64%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARV IGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220
           YLK+KAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQ A
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQNA 220

[Close]

BLAST of Csor.00g022500 vs. NCBI nr
Match: XP_008451785.1 (PREDICTED: 60S ribosomal protein L10-like [Cucumis melo] >TYK16331.1 60S ribosomal protein L10-like [Cucumis melo var. makuwa])

HSP 1 Score: 449 bits (1156), Expect = 1.82e-159
Identity = 216/220 (98.18%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARV IGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220
           YLK+KAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQ A
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]

BLAST of Csor.00g022500 vs. ExPASy TrEMBL
Match: A0A6J1FU16 (60S ribosomal protein L10-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447292 PE=3 SV=1)

HSP 1 Score: 456 bits (1172), Expect = 3.20e-162
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220
           YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA
Sbjct: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220

[Close]

BLAST of Csor.00g022500 vs. ExPASy TrEMBL
Match: A0A6J1FVN9 (60S ribosomal protein L10-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447292 PE=3 SV=1)

HSP 1 Score: 456 bits (1172), Expect = 6.86e-162
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV
Sbjct: 22  MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 81

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 82  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 141

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 142 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 201

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220
           YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA
Sbjct: 202 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 241

[Close]

BLAST of Csor.00g022500 vs. ExPASy TrEMBL
Match: A0A6J1J383 (60S ribosomal protein L10 OS=Cucurbita maxima OX=3661 GN=LOC111481440 PE=3 SV=1)

HSP 1 Score: 453 bits (1166), Expect = 2.63e-161
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220
           YLK KAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA
Sbjct: 181 YLKLKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220

[Close]

BLAST of Csor.00g022500 vs. ExPASy TrEMBL
Match: A0A5D3CWP6 (60S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001130 PE=3 SV=1)

HSP 1 Score: 449 bits (1156), Expect = 8.81e-160
Identity = 216/220 (98.18%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARV IGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220
           YLK+KAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQ A
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]

BLAST of Csor.00g022500 vs. ExPASy TrEMBL
Match: A0A1S3BT36 (60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103492967 PE=3 SV=1)

HSP 1 Score: 449 bits (1156), Expect = 8.81e-160
Identity = 216/220 (98.18%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARV IGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 220
           YLK+KAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQ A
Sbjct: 181 YLKYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQTA 220

[Close]

BLAST of Csor.00g022500 vs. TAIR 10
Match: AT1G26910.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 411.4 bits (1056), Expect = 4.6e-115
Identity = 195/220 (88.64%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMKRKGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQAA 221
           Y K + E +I+PDGVNAK L CHGPLANRQPG AFLS  A
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLSAGA 220

[Close]

BLAST of Csor.00g022500 vs. TAIR 10
Match: AT1G14320.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 408.3 bits (1048), Expect = 3.9e-114
Identity = 192/216 (88.89%), Postives = 202/216 (93.52%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 217
           + K + E +++PDGVNAK L CHGPLANRQPG AFL
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFL 216

[Close]

BLAST of Csor.00g022500 vs. TAIR 10
Match: AT1G66580.1 (senescence associated gene 24 )

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-113
Identity = 193/217 (88.94%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKDN+G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAE 180

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFLS 218
           Y K +A  +I+PDGVNAK L  HGPLANRQPG AF+S
Sbjct: 181 YTKLRAMKRIVPDGVNAKFLSNHGPLANRQPGSAFIS 217

[Close]

BLAST of Csor.00g022500 vs. TAIR 10
Match: AT1G14320.2 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 275.8 bits (704), Expect = 3.0e-74
Identity = 140/216 (64.81%), Postives = 149/216 (68.98%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM                                            
Sbjct: 61  SSEALEAARIACNKYM-------------------------------------------- 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDNNGQNAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
                        VLLSVRCKD +G +AQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 -------------VLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 159

Query: 181 YLKFKAENKILPDGVNAKLLGCHGPLANRQPGRAFL 217
           + K + E +++PDGVNAK L CHGPLANRQPG AFL
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFL 159

The following BLAST results are available for this feature:

BLAST of Csor.00g022500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M5M7	3.9e-119	92.27	60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1	[more]
P93847	8.8e-119	93.15	60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1	[more]
Q9SPB3	1.1e-118	91.24	60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1	[more]
Q08770	6.5e-114	88.64	60S ribosomal protein L10-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10B PE=2 SV=2	[more]
Q93VT9	5.5e-113	88.89	60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1	[more]

BLAST of Csor.00g022500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942137.1	6.61e-162	100.00	60S ribosomal protein L10-like isoform X2 [Cucurbita moschata] >XP_022942138.1 6...	[more]
XP_022942135.1	1.42e-161	100.00	60S ribosomal protein L10-like isoform X1 [Cucurbita moschata]	[more]
XP_022982620.1	5.43e-161	99.55	60S ribosomal protein L10 [Cucurbita maxima] >XP_022982629.1 60S ribosomal prote...	[more]
XP_004137249.1	1.28e-159	98.64	60S ribosomal protein L10 [Cucumis sativus] >KAE8649248.1 hypothetical protein C...	[more]
XP_008451785.1	1.82e-159	98.18	PREDICTED: 60S ribosomal protein L10-like [Cucumis melo] >TYK16331.1 60S ribosom...	[more]

BLAST of Csor.00g022500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FU16	3.20e-162	100.00	60S ribosomal protein L10-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1FVN9	6.86e-162	100.00	60S ribosomal protein L10-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1J383	2.63e-161	99.55	60S ribosomal protein L10 OS=Cucurbita maxima OX=3661 GN=LOC111481440 PE=3 SV=1	[more]
A0A5D3CWP6	8.81e-160	98.18	60S ribosomal protein L10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BT36	8.81e-160	98.18	60S ribosomal protein L10-like OS=Cucumis melo OX=3656 GN=LOC103492967 PE=3 SV=1	[more]

BLAST of Csor.00g022500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26910.1	4.6e-115	88.64	Ribosomal protein L16p/L10e family protein	[more]
AT1G14320.1	3.9e-114	88.89	Ribosomal protein L16p/L10e family protein	[more]
AT1G66580.1	1.5e-113	88.94	senescence associated gene 24	[more]
AT1G14320.2	3.0e-74	64.81	Ribosomal protein L16p/L10e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001197	Ribosomal protein L10e	PIRSF	PIRSF005590	RPL10a_RPL10e	coord: 1..182 e-value: 8.4E-95 score: 313.3
IPR001197	Ribosomal protein L10e	TIGRFAM	TIGR00279	TIGR00279	coord: 1..174 e-value: 2.9E-77 score: 256.2
IPR001197	Ribosomal protein L10e	PANTHER	PTHR11726	60S RIBOSOMAL PROTEIN L10	coord: 1..217
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 12..166 e-value: 1.7E-36 score: 125.2
IPR016180	Ribosomal protein L10e/L16	CDD	cd01433	Ribosomal_L16_L10e	coord: 41..166 e-value: 2.44958E-44 score: 142.245
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	3.90.1170.10	Ribosomal protein L10e/L16	coord: 1..218 e-value: 3.9E-116 score: 388.2
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	54686	Ribosomal protein L16p/L10e	coord: 4..173
None	No IPR available	PANTHER	PTHR11726:SF42	60S RIBOSOMAL PROTEIN L10-LIKE	coord: 1..217
IPR018255	Ribosomal protein L10e, conserved site	PROSITE	PS01257	RIBOSOMAL_L10E	coord: 108..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g022500.m01	Csor.00g022500.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome