Csor.00g022340 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g022340
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	CASP-like protein
Location	Csor_Chr04: 3290578 .. 3290997 (-)
RNA-Seq Expression	Csor.00g022340
Synteny	Csor.00g022340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCGACCTTCAACCATGTCTAAGGCTTGGACTCTGTTCTTCCTGGATCAGGTTGGGTTAGGTTCATTATTAATAGAAAGTAGATAATAATTGAGATGAATGAAATTGTAATTCATTGCGTACCTCGCATCTCCATAGCTGCTGACCTACATAACCCTGGCGGCGGGGACGGTGTCGACGGAGGTGCTGTACTTGGCCTACAATGGGGACACTGAAATAACATGGAGTGCGGCCTGTGGGTCGTTTGGGAAGTTCTGCAGCAAAGCCACGGCCTCGGTGGTGATCACCTTCGTTGTGGTTGCTGTCTATGCTTTCATTTCCATTCTGTCTTCTTACAAGCTGTTCGGTAGATACAGTGCTCCCATGCCGGATCCCTCCAAGCAACTTGAGATCTCTGCCTTCTCTGGGCGATGCTGA

mRNA sequence

ATGTCGCGACCTTCAACCATGTCTAAGGCTTGGACTCTGTTCTTCCTGGATCAGCTGCTGACCTACATAACCCTGGCGGCGGGGACGGTGTCGACGGAGGTGCTGTACTTGGCCTACAATGGGGACACTGAAATAACATGGAGTGCGGCCTGTGGGTCGTTTGGGAAGTTCTGCAGCAAAGCCACGGCCTCGGTGGTGATCACCTTCGTTGTGGTTGCTGTCTATGCTTTCATTTCCATTCTGTCTTCTTACAAGCTGTTCGGTAGATACAGTGCTCCCATGCCGGATCCCTCCAAGCAACTTGAGATCTCTGCCTTCTCTGGGCGATGCTGA

Coding sequence (CDS)

ATGTCGCGACCTTCAACCATGTCTAAGGCTTGGACTCTGTTCTTCCTGGATCAGCTGCTGACCTACATAACCCTGGCGGCGGGGACGGTGTCGACGGAGGTGCTGTACTTGGCCTACAATGGGGACACTGAAATAACATGGAGTGCGGCCTGTGGGTCGTTTGGGAAGTTCTGCAGCAAAGCCACGGCCTCGGTGGTGATCACCTTCGTTGTGGTTGCTGTCTATGCTTTCATTTCCATTCTGTCTTCTTACAAGCTGTTCGGTAGATACAGTGCTCCCATGCCGGATCCCTCCAAGCAACTTGAGATCTCTGCCTTCTCTGGGCGATGCTGA

Protein sequence

MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC

Homology

[Close]

BLAST of Csor.00g022340 vs. ExPASy Swiss-Prot
Match: C6TCJ2 (CASP-like protein 2A2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 7.0e-32
Identity = 68/108 (62.96%), Postives = 82/108 (75.93%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           M  PST+ +AWT F LDQ+LTYI LAAG VSTEVLYLA NGD   TWS+ACGSFG+FC K
Sbjct: 99  MPCPSTIPRAWTFFLLDQVLTYIILAAGAVSTEVLYLAENGDAATTWSSACGSFGRFCHK 158

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSG 109
            TASV ITFV V  Y  +S++SSYKLF +Y AP   P++ +E++AF G
Sbjct: 159 VTASVAITFVAVFCYVLLSLVSSYKLFTKYDAPASRPTEAIEVAAFPG 206

[Close]

BLAST of Csor.00g022340 vs. ExPASy Swiss-Prot
Match: A7QBZ2 (CASP-like protein 2A1 OS=Vitis vinifera OX=29760 GN=VIT_01s0010g01870 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 4.5e-31
Identity = 67/106 (63.21%), Postives = 80/106 (75.47%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           M RP TMS+AWT F LDQ+LTY+ LAAG VSTEV+YLAY GD  +TWS AC SFG FC K
Sbjct: 98  MPRPPTMSRAWTFFLLDQVLTYLILAAGAVSTEVVYLAYKGDEAVTWSDACSSFGGFCQK 157

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAF 107
            TAS+ ITFV V  YA +S++SSYKLF +Y AP+    K +EI+AF
Sbjct: 158 TTASISITFVTVLCYAVLSLISSYKLFSKYDAPICFNGKGIEIAAF 203

[Close]

BLAST of Csor.00g022340 vs. ExPASy Swiss-Prot
Match: B9T3K6 (CASP-like protein 2A1 OS=Ricinus communis OX=3988 GN=RCOM_0477780 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-30
Identity = 69/107 (64.49%), Postives = 80/107 (74.77%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           M RPSTMS+AWT FFLDQ+LTY+ LAA  VS E LYLA  GD  ITWSAAC SFG FC K
Sbjct: 97  MPRPSTMSRAWTFFFLDQVLTYVILAAAAVSVEALYLARKGDIAITWSAACVSFGGFCHK 156

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAP-MPDPSKQLEISAF 107
           A  S VITF+VV  YA +S++SSYKLF RY AP +  P K +E++AF
Sbjct: 157 AITSAVITFIVVVCYALLSLVSSYKLFSRYGAPDVSYPGKGIEVAAF 203

[Close]

BLAST of Csor.00g022340 vs. ExPASy Swiss-Prot
Match: B9I0G0 (CASP-like protein 2A1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_834139 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.9e-30
Identity = 70/109 (64.22%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           M R STM +AW  F LDQ+LTY+ LAAGTVSTEVLYLA  GDT ITWS AC SFG FC K
Sbjct: 93  MPRASTMPRAWAFFLLDQVLTYVILAAGTVSTEVLYLASKGDTTITWSEACVSFGGFCHK 152

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAP-MPDPSKQLEISAFSG 109
           A  S+VITFVVV  YA +S+LSSYKLF +Y +P +  P K +EI+ F G
Sbjct: 153 ALISIVITFVVVICYAALSLLSSYKLFSKYDSPVLTYPGKGIEIATFHG 201

[Close]

BLAST of Csor.00g022340 vs. ExPASy Swiss-Prot
Match: Q8W4Z5 (CASP-like protein F16 OS=Gossypium hirsutum OX=3635 GN=F16 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-29
Identity = 64/105 (60.95%), Postives = 79/105 (75.24%), Query Frame = 0


Query: 4   PSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATA 63
           PSTM +AWT F LDQ+LTY+ L A  VSTEVLYLA  GD+ ITWSAACG+F  FC KAT 
Sbjct: 103 PSTMPRAWTFFLLDQILTYVILGAAAVSTEVLYLANKGDSAITWSAACGTFAGFCHKATI 162

Query: 64  SVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSG 109
           +VVITFV V  YA +S++SSY+LF ++ AP+  PSK +E + F G
Sbjct: 163 AVVITFVAVICYAVLSLVSSYRLFTKFDAPVNYPSKTIEATVFHG 207

[Close]

BLAST of Csor.00g022340 vs. NCBI nr
Match: KAG6600469.1 (hypothetical protein SDJN03_05702, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216 bits (549), Expect = 1.66e-70
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK
Sbjct: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC 110
           ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC
Sbjct: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC 110

[Close]

BLAST of Csor.00g022340 vs. NCBI nr
Match: KAG7031116.1 (CASP-like protein 2A1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216 bits (549), Expect = 7.13e-69
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK
Sbjct: 116 MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 175

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC 110
           ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC
Sbjct: 176 ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC 225

[Close]

BLAST of Csor.00g022340 vs. NCBI nr
Match: XP_022941677.1 (CASP-like protein 2A1 [Cucurbita moschata])

HSP 1 Score: 214 bits (544), Expect = 2.02e-68
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK
Sbjct: 94  MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 153

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC 110
           ATASVVITFVVVA YAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC
Sbjct: 154 ATASVVITFVVVAFYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC 203

[Close]

BLAST of Csor.00g022340 vs. NCBI nr
Match: XP_023525986.1 (CASP-like protein 2A1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214 bits (544), Expect = 2.16e-68
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK
Sbjct: 96  MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 155

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC 110
           ATASVVITFVVVA YAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC
Sbjct: 156 ATASVVITFVVVAFYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC 205

[Close]

BLAST of Csor.00g022340 vs. NCBI nr
Match: XP_022982561.1 (CASP-like protein 2A1 [Cucurbita maxima])

HSP 1 Score: 213 bits (543), Expect = 2.87e-68
Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK
Sbjct: 94  MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 153

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC 110
           ATASVVITFVVVA YAFISILSSYKLFGRYSAPMPDPSKQLE+SAFSGRC
Sbjct: 154 ATASVVITFVVVAFYAFISILSSYKLFGRYSAPMPDPSKQLEVSAFSGRC 203

[Close]

BLAST of Csor.00g022340 vs. ExPASy TrEMBL
Match: A0A6J1FN57 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111446964 PE=3 SV=1)

HSP 1 Score: 214 bits (544), Expect = 9.79e-69
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK
Sbjct: 94  MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 153

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC 110
           ATASVVITFVVVA YAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC
Sbjct: 154 ATASVVITFVVVAFYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC 203

[Close]

BLAST of Csor.00g022340 vs. ExPASy TrEMBL
Match: A0A6J1IZN6 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481398 PE=3 SV=1)

HSP 1 Score: 213 bits (543), Expect = 1.39e-68
Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK
Sbjct: 94  MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 153

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAFSGRC 110
           ATASVVITFVVVA YAFISILSSYKLFGRYSAPMPDPSKQLE+SAFSGRC
Sbjct: 154 ATASVVITFVVVAFYAFISILSSYKLFGRYSAPMPDPSKQLEVSAFSGRC 203

[Close]

BLAST of Csor.00g022340 vs. ExPASy TrEMBL
Match: A0A6J1CN49 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111012792 PE=3 SV=1)

HSP 1 Score: 183 bits (465), Expect = 7.86e-57
Identity = 93/106 (87.74%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           M RPSTMSKAWT F LDQLLTYITLAAGTVSTEVLYLAYNGDTEITWS+ACGSF KFCSK
Sbjct: 88  MPRPSTMSKAWTFFCLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSSACGSFSKFCSK 147

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPSKQLEISAF 106
           AT SV+ITFVVVA YAFISILSSYKLF RY APM DPSK+LEI+AF
Sbjct: 148 ATTSVIITFVVVAFYAFISILSSYKLFSRYGAPMADPSKELEIAAF 193

[Close]

BLAST of Csor.00g022340 vs. ExPASy TrEMBL
Match: A0A5A7VB95 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001750 PE=3 SV=1)

HSP 1 Score: 179 bits (454), Expect = 4.18e-55
Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           MS PST+SKAWTLFFLDQLLTY+TLAAGTVSTEVLYLAYNGDTEITWSAACG+FGKFCSK
Sbjct: 90  MSPPSTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTEITWSAACGTFGKFCSK 149

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPS--KQLEISAFSG 108
           ATASVVITF+VVA YAFISILSSYKLF RY+AP+P P+  +QL++  F G
Sbjct: 150 ATASVVITFIVVAFYAFISILSSYKLFSRYNAPLPHPNSKQQLQMPVFHG 199

[Close]

BLAST of Csor.00g022340 vs. ExPASy TrEMBL
Match: A0A1S3BSC6 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103492990 PE=3 SV=1)

HSP 1 Score: 179 bits (454), Expect = 4.18e-55
Identity = 91/110 (82.73%), Postives = 101/110 (91.82%), Query Frame = 0


Query: 1   MSRPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSK 60
           MS PST+SKAWTLFFLDQLLTY+TLAAGTVSTEVLYLAYNGDTEITWSAACG+FGKFCSK
Sbjct: 90  MSPPSTISKAWTLFFLDQLLTYLTLAAGTVSTEVLYLAYNGDTEITWSAACGTFGKFCSK 149

Query: 61  ATASVVITFVVVAVYAFISILSSYKLFGRYSAPMPDPS--KQLEISAFSG 108
           ATASVVITF+VVA YAFISILSSYKLF RY+AP+P P+  +QL++  F G
Sbjct: 150 ATASVVITFIVVAFYAFISILSSYKLFSRYNAPLPHPNSKQQLQMPVFHG 199

[Close]

BLAST of Csor.00g022340 vs. TAIR 10
Match: AT1G17200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 64/103 (62.14%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 5   STMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATAS 64
           STM + WT F LDQLLTY+ LAAG VS EVLYLAYNGD+ ITWS AC S+G FC +ATAS
Sbjct: 100 STMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSYGGFCHRATAS 159

Query: 65  VVITFVVVAVYAFISILSSYKLFGRYSAP-MPDPSKQLEISAF 107
           V+ITF VV  Y  +S++SSYKLF R+  P + D +K LE++ F
Sbjct: 160 VIITFFVVCFYIVLSLISSYKLFTRFDPPSIVDSAKNLEVAVF 202

[Close]

BLAST of Csor.00g022340 vs. TAIR 10
Match: AT1G17200.2 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 64/103 (62.14%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 5   STMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATAS 64
           STM + WT F LDQLLTY+ LAAG VS EVLYLAYNGD+ ITWS AC S+G FC +ATAS
Sbjct: 31  STMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSYGGFCHRATAS 90

Query: 65  VVITFVVVAVYAFISILSSYKLFGRYSAP-MPDPSKQLEISAF 107
           V+ITF VV  Y  +S++SSYKLF R+  P + D +K LE++ F
Sbjct: 91  VIITFFVVCFYIVLSLISSYKLFTRFDPPSIVDSAKNLEVAVF 133

[Close]

BLAST of Csor.00g022340 vs. TAIR 10
Match: AT3G14380.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 98.2 bits (243), Expect = 4.3e-21
Identity = 49/90 (54.44%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 4   PSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATA 63
           P +  +  TLF LDQ++TY+ LAAG VS E +YLAY G+  ITWS+AC S+G FC  A  
Sbjct: 89  PISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSACDSYGSFCHNALI 148

Query: 64  SVVITFVVVAVYAFISILSSYKLFGRYSAP 94
           SVV TFVV  +Y  +S++SSY+LF R+ AP
Sbjct: 149 SVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178

[Close]

BLAST of Csor.00g022340 vs. TAIR 10
Match: AT5G54980.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-11
Identity = 31/87 (35.63%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 7   MSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKATASVV 66
           +SKAW  F  DQ+L Y+   +   +TE++YL   GD  +TWS  C S+  +CSK T ++ 
Sbjct: 99  VSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSSYPHYCSKLTIALG 158

Query: 67  ITFVVVAVYAFISILSSYKLFGRYSAP 94
           +   V+  + F+S++S+Y+ F  +  P
Sbjct: 159 LHVFVLFFFLFLSVISAYRAFSPFDPP 185

[Close]

BLAST of Csor.00g022340 vs. TAIR 10
Match: AT5G06200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 50.8 bits (120), Expect = 7.9e-07
Identity = 27/84 (32.14%), Postives = 41/84 (48.81%), Query Frame = 0


Query: 3   RPSTMSKAWTLFFLDQLLTYITLAAGTVSTEVLYLAYNGDTEITWSAACGSFGKFCSKAT 62
           RP  ++    L  LD     +  AA + +  ++YLA+NG+T   W   C  FG FC K +
Sbjct: 116 RPLAVAPRLLLLVLDTAALALDTAAASAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTS 175

Query: 63  ASVVITFVVVAVYAFISILSSYKL 87
            +VV  F  V   A + ++S   L
Sbjct: 176 GAVVSAFASVTFLAILVVISGVSL 199

The following BLAST results are available for this feature:

BLAST of Csor.00g022340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C6TCJ2	7.0e-32	62.96	CASP-like protein 2A2 OS=Glycine max OX=3847 PE=2 SV=1	[more]
A7QBZ2	4.5e-31	63.21	CASP-like protein 2A1 OS=Vitis vinifera OX=29760 GN=VIT_01s0010g01870 PE=2 SV=1	[more]
B9T3K6	1.3e-30	64.49	CASP-like protein 2A1 OS=Ricinus communis OX=3988 GN=RCOM_0477780 PE=2 SV=1	[more]
B9I0G0	2.9e-30	64.22	CASP-like protein 2A1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_834139 PE=3 S...	[more]
Q8W4Z5	1.9e-29	60.95	CASP-like protein F16 OS=Gossypium hirsutum OX=3635 GN=F16 PE=2 SV=1	[more]

BLAST of Csor.00g022340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600469.1	1.66e-70	100.00	hypothetical protein SDJN03_05702, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7031116.1	7.13e-69	100.00	CASP-like protein 2A1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022941677.1	2.02e-68	99.09	CASP-like protein 2A1 [Cucurbita moschata]	[more]
XP_023525986.1	2.16e-68	99.09	CASP-like protein 2A1 [Cucurbita pepo subsp. pepo]	[more]
XP_022982561.1	2.87e-68	98.18	CASP-like protein 2A1 [Cucurbita maxima]	[more]

BLAST of Csor.00g022340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FN57	9.79e-69	99.09	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111446964 PE=3 SV=1	[more]
A0A6J1IZN6	1.39e-68	98.18	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111481398 PE=3 SV=1	[more]
A0A6J1CN49	7.86e-57	87.74	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111012792 PE=3 SV=1	[more]
A0A5A7VB95	4.18e-55	82.73	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001...	[more]
A0A1S3BSC6	4.18e-55	82.73	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103492990 PE=3 SV=1	[more]

BLAST of Csor.00g022340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17200.1	1.1e-29	62.14	Uncharacterised protein family (UPF0497)	[more]
AT1G17200.2	1.1e-29	62.14	Uncharacterised protein family (UPF0497)	[more]
AT3G14380.1	4.3e-21	54.44	Uncharacterised protein family (UPF0497)	[more]
AT5G54980.1	1.4e-11	35.63	Uncharacterised protein family (UPF0497)	[more]
AT5G06200.1	7.9e-07	32.14	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 4..73 e-value: 2.0E-18 score: 66.6
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 3..85 e-value: 3.6E-17 score: 60.6
None	No IPR available	PANTHER	PTHR11615:SF212	CASP-LIKE PROTEIN 2A1	coord: 1..107
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g022340.m01	Csor.00g022340.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding