Csor.00g021830 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAAATAAGCTTCAGCAAATAGGCCGTAGTTTTAGGGCGAAAAGTCGTTTCTATACCCATCTCGTGTTAAAAGAACCCGATACCTTCTATTACCTAACTCTGGAAGCAATGTCCGTTGCAAACAAGCGGTTCAAGGCCACGAACGACATGTCGGCCGCCGCAGAACAAGGGAATATCCTTATCGATTCCAGTACAACATTGACAATTTTACCCCCGAATTTCTACAAAGGTGTCGCTTCAACATTGGCGCGTGTTGTTAAAGCGAAGCGAGTGGATGATCCCATAATGGTTGGAAGAACGGTTTGTCTAAACCAATTGACTGATTTAGTTCGACCTATCCAACCCGACTCGAGTGGATTAGACTAA ATGCAAAATAAGCTTCAGCAAATAGGCCGTAGTTTTAGGGCGAAAAGTCGTTTCTATACCCATCTCGTGTTAAAAGAACCCGATACCTTCTATTACCTAACTCTGGAAGCAATGTCCGTTGCAAACAAGCGGTTCAAGGCCACGAACGACATGTCGGCCGCCGCAGAACAAGGGAATATCCTTATCGATTCCAGTACAACATTGACAATTTTACCCCCGAATTTCTACAAAGGTGTCGCTTCAACATTGGCGCGTGTTGTTAAAGCGAAGCGAGTGGATGATCCCATAATGGTTGGAAGAACGGTTTGTCTAAACCAATTGACTGATTTAGTTCGACCTATCCAACCCGACTCGAGTGGATTAGACTAA ATGCAAAATAAGCTTCAGCAAATAGGCCGTAGTTTTAGGGCGAAAAGTCGTTTCTATACCCATCTCGTGTTAAAAGAACCCGATACCTTCTATTACCTAACTCTGGAAGCAATGTCCGTTGCAAACAAGCGGTTCAAGGCCACGAACGACATGTCGGCCGCCGCAGAACAAGGGAATATCCTTATCGATTCCAGTACAACATTGACAATTTTACCCCCGAATTTCTACAAAGGTGTCGCTTCAACATTGGCGCGTGTTGTTAAAGCGAAGCGAGTGGATGATCCCATAATGGTTGGAAGAACGGTTTGTCTAAACCAATTGACTGATTTAGTTCGACCTATCCAACCCGACTCGAGTGGATTAGACTAA MQNKLQQIGRSFRAKSRFYTHLVLKEPDTFYYLTLEAMSVANKRFKATNDMSAAAEQGNILIDSSTTLTILPPNFYKGVASTLARVVKAKRVDDPIMVGRTVCLNQLTDLVRPIQPDSSGLD Homology
BLAST of Csor.00g021830 vs. ExPASy Swiss-Prot
Match: Q6XBF8 (Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.2e-10 Identity = 38/96 (39.58%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Csor.00g021830 vs. ExPASy Swiss-Prot
Match: Q3EBM5 (Probable aspartic protease At2g35615 OS=Arabidopsis thaliana OX=3702 GN=At2g35615 PE=3 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.2e-09 Identity = 41/84 (48.81%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of Csor.00g021830 vs. NCBI nr
Match: KAG6600418.1 (putative aspartic protease, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 242 bits (617), Expect = 1.71e-80 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Csor.00g021830 vs. NCBI nr
Match: KAG6600420.1 (putative aspartic protease, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 130 bits (327), Expect = 3.72e-33 Identity = 67/76 (88.16%), Postives = 70/76 (92.11%), Query Frame = 0
BLAST of Csor.00g021830 vs. NCBI nr
Match: XP_023543528.1 (aspartic proteinase CDR1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 127 bits (319), Expect = 5.36e-32 Identity = 64/76 (84.21%), Postives = 70/76 (92.11%), Query Frame = 0
BLAST of Csor.00g021830 vs. NCBI nr
Match: XP_022942027.1 (aspartic proteinase CDR1-like [Cucurbita moschata]) HSP 1 Score: 127 bits (318), Expect = 7.48e-32 Identity = 65/76 (85.53%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of Csor.00g021830 vs. NCBI nr
Match: XP_022942024.1 (aspartic proteinase CDR1-like [Cucurbita moschata]) HSP 1 Score: 116 bits (290), Expect = 1.32e-29 Identity = 65/93 (69.89%), Postives = 70/93 (75.27%), Query Frame = 0
BLAST of Csor.00g021830 vs. ExPASy TrEMBL
Match: A0A6J1FP39 (aspartic proteinase CDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111447216 PE=3 SV=1) HSP 1 Score: 127 bits (318), Expect = 3.62e-32 Identity = 65/76 (85.53%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of Csor.00g021830 vs. ExPASy TrEMBL
Match: A0A6J1FQ48 (aspartic proteinase CDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111447212 PE=4 SV=1) HSP 1 Score: 116 bits (290), Expect = 6.39e-30 Identity = 65/93 (69.89%), Postives = 70/93 (75.27%), Query Frame = 0
BLAST of Csor.00g021830 vs. ExPASy TrEMBL
Match: A0A5A7TPZ5 (Putative aspartic protease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002740 PE=3 SV=1) HSP 1 Score: 113 bits (283), Expect = 3.77e-27 Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 0
BLAST of Csor.00g021830 vs. ExPASy TrEMBL
Match: A0A5D3D1Z7 (Putative aspartic protease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003070 PE=3 SV=1) HSP 1 Score: 112 bits (279), Expect = 1.40e-26 Identity = 60/96 (62.50%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of Csor.00g021830 vs. ExPASy TrEMBL
Match: A0A1S3BT75 (probable aspartic protease At2g35615 OS=Cucumis melo OX=3656 GN=LOC103493255 PE=3 SV=1) HSP 1 Score: 112 bits (279), Expect = 1.40e-26 Identity = 60/96 (62.50%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of Csor.00g021830 vs. TAIR 10
Match: AT1G64830.1 (Eukaryotic aspartyl protease family protein ) HSP 1 Score: 76.3 bits (186), Expect = 2.0e-14 Identity = 38/76 (50.00%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of Csor.00g021830 vs. TAIR 10
Match: AT5G33340.1 (Eukaryotic aspartyl protease family protein ) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11 Identity = 38/96 (39.58%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Csor.00g021830 vs. TAIR 10
Match: AT2G35615.1 (Eukaryotic aspartyl protease family protein ) HSP 1 Score: 62.8 bits (151), Expect = 2.2e-10 Identity = 41/84 (48.81%), Postives = 50/84 (59.52%), Query Frame = 0
BLAST of Csor.00g021830 vs. TAIR 10
Match: AT1G31450.1 (Eukaryotic aspartyl protease family protein ) HSP 1 Score: 58.9 bits (141), Expect = 3.2e-09 Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 0
BLAST of Csor.00g021830 vs. TAIR 10
Match: AT2G28220.1 (Eukaryotic aspartyl protease family protein ) HSP 1 Score: 53.5 bits (127), Expect = 1.4e-07 Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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