Csor.00g021170 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g021170
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Maternal effect embryo arrest 9
Location	Csor_Chr04: 2675110 .. 2675553 (+)
RNA-Seq Expression	Csor.00g021170
Synteny	Csor.00g021170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATCATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAAGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

mRNA sequence

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATCATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAAGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

Coding sequence (CDS)

ATGGAAGCTCTCATCTCCCAGTTCACCTTCCTCTCCGATCGAGCTTTACAAGACAAGAATTTCGACCCTTCCACCATTGAAGACCTCATGAAGCTCTTCGAGATCGAAGCCTACAACTCCTGGGCAGCCTTGGAGCTCCAACACCAGAACGAAACTCGAGACGCTGAGATCGCGATGCAACAGGCTGAGGATCATCTCGATTCCGTCATGGAAGATGCTATGGATGAGTTCAGAAAGTTCGAGGAGGAGTTCGATCGGATGGCCGAGGCTGAGCTTCAAGACCTCGTCGACAAGTCGGAGAAGGCTCGCAAGATGGGCAGTTTGATGGAGAAAGCCGCCGCGGTTGCTTCCAAGAGGTACATGGAGGCGGCGATGAACTCGGCCACTGCTTCCATGAGATCTGCCTGGAAGGCCATTTCGTCCAATAAGGTTCATCCTTCTTGA

Protein sequence

MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQQAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRYMEAAMNSATASMRSAWKAISSNKVHPS

Homology

[Close]

BLAST of Csor.00g021170 vs. NCBI nr
Match: KAG6600354.1 (hypothetical protein SDJN03_05587, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 269 bits (688), Expect = 1.64e-90
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ
Sbjct: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60

Query: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g021170 vs. NCBI nr
Match: KAG7031013.1 (hypothetical protein SDJN02_05052, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268 bits (685), Expect = 4.69e-90
Identity = 146/147 (99.32%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ
Sbjct: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60

Query: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARK+GSLMEKAAAVASKRY
Sbjct: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKLGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g021170 vs. NCBI nr
Match: XP_022942791.1 (uncharacterized protein LOC111447720 [Cucurbita moschata] >XP_022942792.1 uncharacterized protein LOC111447720 [Cucurbita moschata])

HSP 1 Score: 265 bits (678), Expect = 5.47e-89
Identity = 144/147 (97.96%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ
Sbjct: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60

Query: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAED+LDSVMEDAMDEFR+FEEEFDRMAEAELQDL+DKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g021170 vs. NCBI nr
Match: XP_022982937.1 (uncharacterized protein LOC111481629 isoform X1 [Cucurbita maxima] >XP_022982945.1 uncharacterized protein LOC111481629 isoform X2 [Cucurbita maxima])

HSP 1 Score: 261 bits (667), Expect = 9.77e-87
Identity = 142/147 (96.60%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAM 
Sbjct: 40  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 99

Query: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAED+LDSVMEDA+DEFR+FEEEFDRMAE ELQDLVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 100 QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 159

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 160 MEAAMNSATASMRSAWKAISSNKVHPS 186

[Close]

BLAST of Csor.00g021170 vs. NCBI nr
Match: XP_023533822.1 (uncharacterized protein LOC111795549 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261 bits (667), Expect = 5.25e-86
Identity = 142/147 (96.60%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAA+ELQHQNE RDAEIAMQ
Sbjct: 90  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAAMELQHQNEVRDAEIAMQ 149

Query: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAED+LDSVMEDAMDEFR+FEEEFDRMAEAELQDLVDKSEKARKMG LMEKAAAVASKRY
Sbjct: 150 QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLVDKSEKARKMGRLMEKAAAVASKRY 209

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 210 MEAAMNSATASMRSAWKAISSNKVHPS 236

[Close]

BLAST of Csor.00g021170 vs. ExPASy TrEMBL
Match: A0A6J1FR93 (uncharacterized protein LOC111447720 OS=Cucurbita moschata OX=3662 GN=LOC111447720 PE=4 SV=1)

HSP 1 Score: 265 bits (678), Expect = 2.65e-89
Identity = 144/147 (97.96%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ
Sbjct: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60

Query: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAED+LDSVMEDAMDEFR+FEEEFDRMAEAELQDL+DKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQDLIDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g021170 vs. ExPASy TrEMBL
Match: A0A6J1IXX5 (uncharacterized protein LOC111481629 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481629 PE=4 SV=1)

HSP 1 Score: 261 bits (667), Expect = 4.73e-87
Identity = 142/147 (96.60%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAM 
Sbjct: 40  MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMH 99

Query: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAED+LDSVMEDA+DEFR+FEEEFDRMAE ELQDLVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 100 QAEDYLDSVMEDALDEFRRFEEEFDRMAEVELQDLVDKSEKARKMGSLMEKAAAVASKRY 159

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 160 MEAAMNSATASMRSAWKAISSNKVHPS 186

[Close]

BLAST of Csor.00g021170 vs. ExPASy TrEMBL
Match: A0A0A0LAB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 1.16e-83
Identity = 136/147 (92.52%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA+ELQHQNE +DAEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAAIELQHQNEVQDAEIAMQ 60

Query: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAED+LDSVMEDAMDEFR+FEEEFDRMAEAELQ L+DKSEKARKMGSLMEKAA+VASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQQLLDKSEKARKMGSLMEKAASVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g021170 vs. ExPASy TrEMBL
Match: A0A6J1E4Z9 (uncharacterized protein LOC111430656 OS=Cucurbita moschata OX=3662 GN=LOC111430656 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 1.58e-81
Identity = 135/147 (91.84%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALISQFTFLSD+AL+DKNFDPSTIEDLMKLFEIEAY SWAA ELQ QNE ++AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALRDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           +AED+LDSVMEDAMDEFR+FEEEFDRMAEAELQ+LVDKSEKARKMGSLMEKAAAVASKRY
Sbjct: 61  KAEDYLDSVMEDAMDEFRRFEEEFDRMAEAELQELVDKSEKARKMGSLMEKAAAVASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g021170 vs. ExPASy TrEMBL
Match: A0A6J1JCA1 (uncharacterized protein LOC111483158 OS=Cucurbita maxima OX=3661 GN=LOC111483158 PE=4 SV=1)

HSP 1 Score: 245 bits (625), Expect = 3.19e-81
Identity = 134/147 (91.16%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALISQFTFLSD+AL DKNFDPSTIEDLMKLFEIEAY SWAA ELQ QNE ++AEIAMQ
Sbjct: 1   MEALISQFTFLSDQALHDKNFDPSTIEDLMKLFEIEAYKSWAASELQLQNEAQEAEIAMQ 60

Query: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           QAED+LDSVMEDAMDEFR+FEEEFDRMAE ELQ+LVDKSEKARKMGSLMEKAAA+ASKRY
Sbjct: 61  QAEDYLDSVMEDAMDEFRRFEEEFDRMAETELQELVDKSEKARKMGSLMEKAAAIASKRY 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147
           MEAAMNSATASMRSAWKAISSNKVHPS
Sbjct: 121 MEAAMNSATASMRSAWKAISSNKVHPS 147

[Close]

BLAST of Csor.00g021170 vs. TAIR 10
Match: AT1G60870.1 (maternal effect embryo arrest 9 )

HSP 1 Score: 158.3 bits (399), Expect = 4.7e-39
Identity = 87/147 (59.18%), Postives = 113/147 (76.87%), Query Frame = 0


Query: 1   MEALISQFTFLSDRALQDKNFDPSTIEDLMKLFEIEAYNSWAALELQHQNETRDAEIAMQ 60
           MEALI  FT LSD+AL DK FDPS IEDLM+LFE+++Y +WAALE + Q E  +AE +++
Sbjct: 1   MEALIHHFTLLSDQALVDKTFDPSRIEDLMRLFEVDSYKAWAALESEQQQELEEAEESLR 60

Query: 61  QAEDHLDSVMEDAMDEFRKFEEEFDRMAEAELQDLVDKSEKARKMGSLMEKAAAVASKRY 120
           +AE  LD  ME  M+E+R+  EE +RM  AEL++L +K+E AR+ G+LMEKAA VA+KR+
Sbjct: 61  EAELELDRDMEWGMEEYRRTLEEMERMEAAELKELEEKAETARRTGNLMEKAATVAAKRH 120

Query: 121 MEAAMNSATASMRSAWKAISSNKVHPS 148
           + AAM SA ASMRSAWK  + NKVHPS
Sbjct: 121 IAAAMGSAAASMRSAWKTAAGNKVHPS 147

The following BLAST results are available for this feature:

BLAST of Csor.00g021170 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g021170 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600354.1	1.64e-90	100.00	hypothetical protein SDJN03_05587, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7031013.1	4.69e-90	99.32	hypothetical protein SDJN02_05052, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022942791.1	5.47e-89	97.96	uncharacterized protein LOC111447720 [Cucurbita moschata] >XP_022942792.1 unchar...	[more]
XP_022982937.1	9.77e-87	96.60	uncharacterized protein LOC111481629 isoform X1 [Cucurbita maxima] >XP_022982945...	[more]
XP_023533822.1	5.25e-86	96.60	uncharacterized protein LOC111795549 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g021170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FR93	2.65e-89	97.96	uncharacterized protein LOC111447720 OS=Cucurbita moschata OX=3662 GN=LOC1114477...	[more]
A0A6J1IXX5	4.73e-87	96.60	uncharacterized protein LOC111481629 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0LAB6	1.16e-83	92.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G214020 PE=4 SV=1	[more]
A0A6J1E4Z9	1.58e-81	91.84	uncharacterized protein LOC111430656 OS=Cucurbita moschata OX=3662 GN=LOC1114306...	[more]
A0A6J1JCA1	3.19e-81	91.16	uncharacterized protein LOC111483158 OS=Cucurbita maxima OX=3661 GN=LOC111483158...	[more]

BLAST of Csor.00g021170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60870.1	4.7e-39	59.18	maternal effect embryo arrest 9	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 70..90
None	No IPR available	PANTHER	PTHR37707	MATERNAL EFFECT EMBRYO ARREST 9	coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g021170.m01	Csor.00g021170.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009555	pollen development
cellular_component	GO:0009506	plasmodesma