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Csor.00g020590 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGCGAGTACCCTCGCCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGGTTGCGTTTATCGATTGTTTTCTTCCCTAATTTTCGGATTTTCGTCTTTCAAAAAGTTGTAATTAAACTGAAACTGATTTCGCAGTGACTGATGATCAGCTTTCAATGTGAGTATTCTCGATTCCTTCCATTATGAGAAGTTCTTCATCTTGTTATGTTTATGAATCTTCGAAGTTGACTGTGTCGGCGCTGGTTCCAGATTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTTGATCAAAGTGGAGTGAAGAAAATTTCAGGCGATCCAAGCGGACGGTCCATCTTTCAGGTGATTACAGTATTTTTCATCTTATTTTTGTTGAAAATTCGATCAAACATCGATTTTAAGTTCACGGTTTCAATTAGGGTTTGCTTAAACTGCCCTAGAACAGATCGTAGTTACATTCTGCTTTTGTTTAAAGCCTCGTGAATGAATGGTCTTGAATTAAACCACGTTTTTTCTCCATCTCTCTAGTGGTAGAGAAGGATTTACCCGACACTTAAGGAATGATTTGAGAAGGAATTACACTGTAGAATGCTGTTGGTTTGATATCATGTGCATTGTAGAATGTTGCTGGTTTGATATCATGTGCATTGTAGAATGCTGTTGGTTTGATATCATGTGCATTGTAGAATGCTGTTGGTTTGATATCATGTGCATTGTAGAATGCTGTTGGTTTGATATCATGTGCATTGTAGAATGCTGTTGGTTTGATATCATGTGCATTGTAGAATGTTGCTGGTTTGATATCATGTGCATTGTAGAATGTTGCTGGTTTGATATCATGTGCATTGTAGAATGTTGCTGGTTTGATATCATGTACATTGTAAAATTCTGCTGGTTTGATATCATGTACATTGTAAAATTCTGCTGGTTTGATATCATGTACATTGTAGAATGTTGCTGGTTTGATATCATGTACTGTGCTATGTATTACTAAACCTGAAAACTATATTCTGGAATATGAATATGAGATTAAATCTTTAACCTATCGATTTAAGCTTTTGGATTTAGTCTTGATTTACATAGTATTAGAGTCGACCCTTCTGAGTCGTAGCGACATTATTCAAAGTTGAACCCTCATTATGTTTTAAGTTTGCTTGGCCATATGAATCAAAATCGAGAAAACCAAGAGCTACTGTAATAGTCCAAGGCCACCGATAGCAGATACTGTCCTCTTTGGGCTTTCTCTTTTAGACTTCCCCTCAAAGTTTTTAAGACGCGTCTGCTAGAGAGAGGTTTCCACACTCTTATAAAGAATGATTTGTTCCCCTCTCCAACAGTTGTAGGATCCCACAATCCACTCCCCCTTCGGGGCCAACGTCCTCGCTGGCACACCGCCCGGTGTCTAGCTCAGATCTCACATCAGTTGGAGAGGAGAACAAAACATTTTTTATAAGGGAGTAGAAACCTCTCCCTAGCAGACACGTTTTAAAATCCTTGAGGGGAAGCCCGAAAGGGAAAGTTCAAAGAGGACGATATCTGCTAGCGGTGGGCTTGGGCTTGGGCTGTTATTTAGTCATTTGTACATGTTTCTACCAGACTTACCCCAAGTCTTTGGTTGCCAGATTCAAAACCAGCCAAATTGTTTGTTTAGAACAAGTAACATTCTTGAGAATCGTTCACAGAATGAGTTCTGTTTTCTTTCAATGTAAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCGTAAGGATCACTTCTTTCTTGTTAAGTGTAGCTGAGTTGAAAGCTTTAAGAAAATCCTATTCCTTCCACTTCCCAATCATCTTTATTTGTCGTTCTTTATTTCATAGTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTAGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAACTGGCGATATTATTGTCCAATCTTTAG ATGAGTGCGAGTACCCTCGCCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACTGATGATCAGCTTTCAATATTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTTGATCAAAGTGGAGTGAAGAAAATTTCAGGCGATCCAAGCGGACGGTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTAGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAACTGGCGATATTATTGTCCAATCTTTAG ATGAGTGCGAGTACCCTCGCCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACTGATGATCAGCTTTCAATATTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTTGATCAAAGTGGAGTGAAGAAAATTTCAGGCGATCCAAGCGGACGGTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTAGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAACTGGCGATATTATTGTCCAATCTTTAG MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGDPSGRSIFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKVSDEELAILLSNL Homology
BLAST of Csor.00g020590 vs. NCBI nr
Match: KAG6600296.1 (Zinc finger SWIM domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 261 bits (666), Expect = 1.21e-87 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Csor.00g020590 vs. NCBI nr
Match: XP_023526305.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023526312.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 259 bits (663), Expect = 3.46e-87 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Csor.00g020590 vs. NCBI nr
Match: XP_022942858.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata] >XP_022942859.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata]) HSP 1 Score: 259 bits (662), Expect = 4.92e-87 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Csor.00g020590 vs. NCBI nr
Match: KAG7030956.1 (Zinc finger SWIM domain-containing protein 7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 259 bits (661), Expect = 6.99e-87 Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Csor.00g020590 vs. NCBI nr
Match: XP_022983272.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_022983279.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_022983286.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima]) HSP 1 Score: 256 bits (653), Expect = 1.16e-85 Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Csor.00g020590 vs. ExPASy TrEMBL
Match: A0A6J1FSJ7 (zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447762 PE=4 SV=1) HSP 1 Score: 259 bits (662), Expect = 2.38e-87 Identity = 131/132 (99.24%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Csor.00g020590 vs. ExPASy TrEMBL
Match: A0A6J1J6W2 (zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481893 PE=4 SV=1) HSP 1 Score: 256 bits (653), Expect = 5.62e-86 Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Csor.00g020590 vs. ExPASy TrEMBL
Match: A0A0A0KWG5 (SWIM-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001010 PE=4 SV=1) HSP 1 Score: 244 bits (624), Expect = 1.49e-81 Identity = 124/132 (93.94%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of Csor.00g020590 vs. ExPASy TrEMBL
Match: A0A1S3BZP2 (zinc finger SWIM domain-containing protein 7 OS=Cucumis melo OX=3656 GN=LOC103494794 PE=4 SV=1) HSP 1 Score: 241 bits (616), Expect = 2.47e-80 Identity = 122/132 (92.42%), Postives = 125/132 (94.70%), Query Frame = 0
BLAST of Csor.00g020590 vs. ExPASy TrEMBL
Match: A0A6J1D5Z4 (zinc finger SWIM domain-containing protein 7 OS=Momordica charantia OX=3673 GN=LOC111017621 PE=4 SV=1) HSP 1 Score: 239 bits (609), Expect = 2.89e-79 Identity = 119/132 (90.15%), Postives = 124/132 (93.94%), Query Frame = 0
BLAST of Csor.00g020590 vs. TAIR 10
Match: AT4G33925.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 192.6 bits (488), Expect = 2.0e-49 Identity = 90/132 (68.18%), Postives = 112/132 (84.85%), Query Frame = 0
BLAST of Csor.00g020590 vs. TAIR 10
Match: AT4G33925.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; Has 106 Blast hits to 106 proteins in 53 species: Archae - 8; Bacteria - 0; Metazoa - 47; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). ) HSP 1 Score: 178.3 bits (451), Expect = 4.0e-45 Identity = 83/119 (69.75%), Postives = 101/119 (84.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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