Csor.00g019680 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g019680
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	GTP-binding protein YPTM2-like isoform X2
Location	Csor_Chr04: 1872987 .. 1875191 (-)
RNA-Seq Expression	Csor.00g019680
Synteny	Csor.00g019680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTTGCAGAAGGAAAGAGCTTCATCAACACAATCAAACTCCAGGAATAAAGCTCAGGTTATAGCTAGACTGATGTTTCAATCTAGTTTTTCTAATCATGAAGGTAATGATAATTACAATAAAATTAGCCTGCATAACTTAACGTTTATGAATTGTAGATTTATTTGTAATGGCATACACTTATAGACAGTTCAAATGAAATATTCTAAACAAGATGATAAATGAAAATTCGAATTTCGAAAGAACAAAAAAGAAATATAGATTTCTTACATATAAAAAATGTACAGCAATAATTTCAGATGAGTTAATCTATATCATAAATGTAACCCAAAGTGCGCACAGTATTGATTATTTCACTCACTTCAATCGAGTACTAAGCAGAAATAAGGTTGATTTTGAATTCAAATCCAAACAAACAATAATTTCATTAAAAAACAAGTCTACAAGCATCAACAGCATTGAATCCATATTTTCCTCTTATATTTAGTAAAGATATGTGATAGCATTTGAGAATTTCTTCAATATGATTACATGTATGGATTATATAATTTTATTGTAAGTAAACGAATGTAAAATTTAGACAAAGTCAGATTCGAGAAAAGTCAAGTTGATTACCAATCGATGTGCTCGGCCTTCAGTCAGGTCATTCATCAAACAGATTTGTTCCAATTCGCAAGCCGATTCTTCTTGCTTCGGCTACATTTTCTCGCTGCCGTTTCCAGCGTACCGCGCGCACCAACACACATTTCAAAGTCAGATTCGAGAAAAGTCAAGTTAATTACCAATCGATGTGCTCGGCCTTCAGTCAGGTCATTCATCAAACAGATTTGTTCCAATTCACAAGCCGATTCTTCTTGCTTCGGCTACATTTTCTCCCTGCCGTTTCCTGCATACAACGCGCACCATCACACATTTCAGTCTCGCTTCTCCGCCTCTCCGCCTCTCCATTTCCTTCTCATCTCATCGCGAAACAGAACTTGAAAGAAACAGAAAAAATGCACCGATCGGTGAGCTGGAACCGATTCTCCGATGAATACTACTCGTCCTCCTCCCCGTCGCCAGCGCTGTCATCGACTCCAGGCCAGGCGTTGCGATTATCATTTGACGGAAATGAGCAGCCGACGAGTTATCCAGCGGATGAGATAGTGAAGCGAGAGAAGGCGCGAGTCAAGTTCGCCGCAACTGCTGTTCATGTGATTCCTCTCGTTTTGGTTCTCTGCGCCATTCTTCTGTGGTTCTTCTCCAATCCAGGTAAGAGAAGATCGTAACGTAACGCAGGTAGATTTCCAATTCTCCTTCTTCGAATCTTTCATTCTTTCCCGCCATTGGTTTTTCCGGGAAAATGAAATAAAATTTCCCTGTTCCCAAACTGAGAGTTTTCCGCTAATCCAACAAATTAATCTCCAAATTTCTTTTTTTTTTTCTTTTATCTAAAAAAATTAAACTTAAAAATTTATATAATAATTTTAAATTAAAAACACTCCCATAACATTCCTACATTAAAAAAGATATTTTAAACTTTTAGAAAAAAAAAAATTTAAAAATAAACTAATTAAAAACTGATTTTCAAAAATATTTTAAAATTTTTGTTAATATTCTTAAATTCATTTAAAATCTTTAAAAATACCTTCAATTTTTTTTTAAAAAAATATTTTTATGATTGATATGTAAATTAAACCTTTCAAAATAATATTAATATCTTTAAATTTTAAAATTTTAAAATGTGCATATATTTTTATTTGTTGTGTTATTTATTTTTAGCAATATTTCAAAATTTCAATAAAATAAATAAATTAATAATAACTATTGATTTTTAATTCTTAGAATTTATCTCCAGCAATTCAATTTTCTTATAATGAATTTCATATTTATTAACTAAATTTCAAAAAATAAATTTTTTTTTTCAAAATTGACTTAGATTTTTTTTAAATATAATAAAAAAATTATTAATATTTCATTCATATAAATTAGGGCAATGTATATTTTAATTAAATTATTATTATTGTAATTGGCATTTTTTTTTTTTTTTTTTTTTTATGTGCAGAAATAGATGCGGGGATGAGATGGGATCCAATGGCAGCAAGAATTGAAGGATTGAACGTTGAGGGGGAAATTGAGAGGGAATTTGGTGGTGCCCAAAACGAAGCTCTCCCAATCTTGGACTCAACTCCCTCGACCCTCAAAATCAAGAGGCTCCATTAA

mRNA sequence

ATGATCTTGCAGAAGGAAAGAGCTTCATCAACACAATCAAACTCCAGGAATAAAGCTCAGGTTATAGCTAGACTGATGTTTCAATCTAGTTTTTCTAATCATGAAGGTCATTCATCAAACAGATTTGTTCCAATTCGCAAGCCGATTCTTCTTGCTTCGGCTACATTTTCTCGCTGCCGTTTCCAGCGTACCGCGCGCACCAACACACATTTCAAAGTCAGATTCGAGAAAAGTCAAGTTAATTACCAATCGATGTGCTCGGCCTTCAGTCAGGTCATTCATCAAACAGATTTGTTCCAATTCACAAGCCGATTCTTCTTGCTTCGGCTACATTTTCTCCCTGCCGTTTCCTGCATACAACGCGCACCATCACACATTTCAGTCTCGCTTCTCCGCCTCTCCGCCTCTCCATTTCCTTCTCATCTCATCGCGAAACAGAACTTGAAAGAAACAGAAAAAATGCACCGATCGGTGAGCTGGAACCGATTCTCCGATGAATACTACTCGTCCTCCTCCCCGTCGCCAGCGCTGTCATCGACTCCAGGCCAGGCGTTGCGATTATCATTTGACGGAAATGAGCAGCCGACGAGTTATCCAGCGGATGAGATAGTGAAGCGAGAGAAGGCGCGAGTCAAGTTCGCCGCAACTGCTGTTCATGTGATTCCTCTCGTTTTGGTTCTCTGCGCCATTCTTCTGTGGTTCTTCTCCAATCCAGAAATAGATGCGGGGATGAGATGGGATCCAATGGCAGCAAGAATTGAAGGATTGAACGTTGAGGGGGAAATTGAGAGGGAATTTGGTGGTGCCCAAAACGAAGCTCTCCCAATCTTGGACTCAACTCCCTCGACCCTCAAAATCAAGAGGCTCCATTAA

Coding sequence (CDS)

ATGATCTTGCAGAAGGAAAGAGCTTCATCAACACAATCAAACTCCAGGAATAAAGCTCAGGTTATAGCTAGACTGATGTTTCAATCTAGTTTTTCTAATCATGAAGGTCATTCATCAAACAGATTTGTTCCAATTCGCAAGCCGATTCTTCTTGCTTCGGCTACATTTTCTCGCTGCCGTTTCCAGCGTACCGCGCGCACCAACACACATTTCAAAGTCAGATTCGAGAAAAGTCAAGTTAATTACCAATCGATGTGCTCGGCCTTCAGTCAGGTCATTCATCAAACAGATTTGTTCCAATTCACAAGCCGATTCTTCTTGCTTCGGCTACATTTTCTCCCTGCCGTTTCCTGCATACAACGCGCACCATCACACATTTCAGTCTCGCTTCTCCGCCTCTCCGCCTCTCCATTTCCTTCTCATCTCATCGCGAAACAGAACTTGAAAGAAACAGAAAAAATGCACCGATCGGTGAGCTGGAACCGATTCTCCGATGAATACTACTCGTCCTCCTCCCCGTCGCCAGCGCTGTCATCGACTCCAGGCCAGGCGTTGCGATTATCATTTGACGGAAATGAGCAGCCGACGAGTTATCCAGCGGATGAGATAGTGAAGCGAGAGAAGGCGCGAGTCAAGTTCGCCGCAACTGCTGTTCATGTGATTCCTCTCGTTTTGGTTCTCTGCGCCATTCTTCTGTGGTTCTTCTCCAATCCAGAAATAGATGCGGGGATGAGATGGGATCCAATGGCAGCAAGAATTGAAGGATTGAACGTTGAGGGGGAAATTGAGAGGGAATTTGGTGGTGCCCAAAACGAAGCTCTCCCAATCTTGGACTCAACTCCCTCGACCCTCAAAATCAAGAGGCTCCATTAA

Protein sequence

MILQKERASSTQSNSRNKAQVIARLMFQSSFSNHEGHSSNRFVPIRKPILLASATFSRCRFQRTARTNTHFKVRFEKSQVNYQSMCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH

Homology

[Close]

BLAST of Csor.00g019680 vs. NCBI nr
Match: KAG6600205.1 (hypothetical protein SDJN03_05438, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 563 bits (1451), Expect = 4.30e-202
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MILQKERASSTQSNSRNKAQVIARLMFQSSFSNHEGHSSNRFVPIRKPILLASATFSRCR 60
           MILQKERASSTQSNSRNKAQVIARLMFQSSFSNHEGHSSNRFVPIRKPILLASATFSRCR
Sbjct: 1   MILQKERASSTQSNSRNKAQVIARLMFQSSFSNHEGHSSNRFVPIRKPILLASATFSRCR 60

Query: 61  FQRTARTNTHFKVRFEKSQVNYQSMCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQ 120
           FQRTARTNTHFKVRFEKSQVNYQSMCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQ
Sbjct: 61  FQRTARTNTHFKVRFEKSQVNYQSMCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQ 120

Query: 121 RAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSST 180
           RAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSST
Sbjct: 121 RAPSHISVSLLRLSASPFPSHLIAKQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSST 180

Query: 181 PGQALRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEI 240
           PGQALRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEI
Sbjct: 181 PGQALRLSFDGNEQPTSYPADEIVKREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEI 240

Query: 241 DAGMRWDPMAARIEGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH 290
           DAGMRWDPMAARIEGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH
Sbjct: 241 DAGMRWDPMAARIEGLNVEGEIEREFGGAQNEALPILDSTPSTLKIKRLH 290

[Close]

BLAST of Csor.00g019680 vs. NCBI nr
Match: KAG7030866.1 (hypothetical protein SDJN02_04903, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405 bits (1042), Expect = 4.24e-141
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 85  MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIA 144
           MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIA
Sbjct: 1   MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIA 60

Query: 145 KQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEIV 204
           KQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEIV
Sbjct: 61  KQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEIV 120

Query: 205 KREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIER 264
           KREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIER
Sbjct: 121 KREKARVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIER 180

Query: 265 EFGGAQNEALPILDSTPSTLKIKRLH 290
           EFGGAQNEALPILDSTPSTLKIKRLH
Sbjct: 181 EFGGAQNEALPILDSTPSTLKIKRLH 206

[Close]

BLAST of Csor.00g019680 vs. NCBI nr
Match: XP_023512832.1 (uncharacterized protein LOC111777447 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282 bits (721), Expect = 5.51e-93
Identity = 147/154 (95.45%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 85  MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPAVSCIQRAPSHISVSLLRLSASPFPSHLIA 144
           MCSAFSQVIHQTDLFQFTSRFFLLRLHFLP VSCIQRAPSHISVSLLRLS S F SHLIA
Sbjct: 1   MCSAFSQVIHQTDLFQFTSRFFLLRLHFLPVVSCIQRAPSHISVSLLRLSIS-FSSHLIA 60

Query: 145 KQNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEIV 204
           K NLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADE+V
Sbjct: 61  KHNLKETEKMHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEMV 120

Query: 205 KREKARVKFAATAVHVIPLVLVLCAILLWFFSNP 238
           KREKAR KFAATAVHVIPLVLVLCAILLWFFSNP
Sbjct: 121 KREKARFKFAATAVHVIPLVLVLCAILLWFFSNP 153

[Close]

BLAST of Csor.00g019680 vs. NCBI nr
Match: XP_022942780.1 (uncharacterized protein LOC111447711 [Cucurbita moschata])

HSP 1 Score: 267 bits (682), Expect = 2.27e-87
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKF 213
           MHRSVSWNRFSDEYYSSSSP PALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKF
Sbjct: 1   MHRSVSWNRFSDEYYSSSSPLPALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKF 60

Query: 214 AATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQNEA 273
           AATAVHVIPLVLVLCAILLWFFSNPEID GMRWDPMAA IEGLNVEGEIEREFGGAQNEA
Sbjct: 61  AATAVHVIPLVLVLCAILLWFFSNPEIDVGMRWDPMAATIEGLNVEGEIEREFGGAQNEA 120

Query: 274 LPILDSTPSTLKIKRLH 290
           LPILDSTPSTLKIKRLH
Sbjct: 121 LPILDSTPSTLKIKRLH 137

[Close]

BLAST of Csor.00g019680 vs. NCBI nr
Match: XP_022986879.1 (uncharacterized protein LOC111484483 [Cucurbita maxima])

HSP 1 Score: 254 bits (649), Expect = 2.50e-82
Identity = 131/139 (94.24%), Postives = 134/139 (96.40%), Query Frame = 0


Query: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARV 213
           MHRSVSWNRFSDEYYSSSSPSPALSSTP QALRL  SFDGNEQPTSYPA+E+VKREKARV
Sbjct: 1   MHRSVSWNRFSDEYYSSSSPSPALSSTPSQALRLTSSFDGNEQPTSYPAEEMVKREKARV 60

Query: 214 KFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQN 273
           KFAATAVHVIPLVLVLCAILLWFFSNPEID GMR DPMAARIEGLNVEGEIEREFGGAQN
Sbjct: 61  KFAATAVHVIPLVLVLCAILLWFFSNPEIDVGMRLDPMAARIEGLNVEGEIEREFGGAQN 120

Query: 274 EALPILDSTPSTLKIKRLH 290
           EALPILDSTPSTLKIKRL+
Sbjct: 121 EALPILDSTPSTLKIKRLY 139

[Close]

BLAST of Csor.00g019680 vs. ExPASy TrEMBL
Match: A0A6J1FWX5 (uncharacterized protein LOC111447711 OS=Cucurbita moschata OX=3662 GN=LOC111447711 PE=4 SV=1)

HSP 1 Score: 267 bits (682), Expect = 1.10e-87
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKF 213
           MHRSVSWNRFSDEYYSSSSP PALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKF
Sbjct: 1   MHRSVSWNRFSDEYYSSSSPLPALSSTPGQALRLSFDGNEQPTSYPADEIVKREKARVKF 60

Query: 214 AATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQNEA 273
           AATAVHVIPLVLVLCAILLWFFSNPEID GMRWDPMAA IEGLNVEGEIEREFGGAQNEA
Sbjct: 61  AATAVHVIPLVLVLCAILLWFFSNPEIDVGMRWDPMAATIEGLNVEGEIEREFGGAQNEA 120

Query: 274 LPILDSTPSTLKIKRLH 290
           LPILDSTPSTLKIKRLH
Sbjct: 121 LPILDSTPSTLKIKRLH 137

[Close]

BLAST of Csor.00g019680 vs. ExPASy TrEMBL
Match: A0A6J1JHB4 (uncharacterized protein LOC111484483 OS=Cucurbita maxima OX=3661 GN=LOC111484483 PE=4 SV=1)

HSP 1 Score: 254 bits (649), Expect = 1.21e-82
Identity = 131/139 (94.24%), Postives = 134/139 (96.40%), Query Frame = 0


Query: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRL--SFDGNEQPTSYPADEIVKREKARV 213
           MHRSVSWNRFSDEYYSSSSPSPALSSTP QALRL  SFDGNEQPTSYPA+E+VKREKARV
Sbjct: 1   MHRSVSWNRFSDEYYSSSSPSPALSSTPSQALRLTSSFDGNEQPTSYPAEEMVKREKARV 60

Query: 214 KFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQN 273
           KFAATAVHVIPLVLVLCAILLWFFSNPEID GMR DPMAARIEGLNVEGEIEREFGGAQN
Sbjct: 61  KFAATAVHVIPLVLVLCAILLWFFSNPEIDVGMRLDPMAARIEGLNVEGEIEREFGGAQN 120

Query: 274 EALPILDSTPSTLKIKRLH 290
           EALPILDSTPSTLKIKRL+
Sbjct: 121 EALPILDSTPSTLKIKRLY 139

[Close]

BLAST of Csor.00g019680 vs. ExPASy TrEMBL
Match: A0A6J1CG79 (uncharacterized protein LOC111011394 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011394 PE=4 SV=1)

HSP 1 Score: 162 bits (409), Expect = 2.70e-46
Identity = 92/140 (65.71%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLS--FDGNEQPTSYPADEIVKREKARV 213
           M+RSVSWNRFSDEYYS SSP+  LSS P QAL LS  F  NE PT+ P   +VKREKARV
Sbjct: 1   MYRSVSWNRFSDEYYSRSSPALVLSSKPDQALGLSSSFGANELPTNDPVAVMVKREKARV 60

Query: 214 KFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREF---GG 273
           KFA TAVHVIPLVL+LCAI+LWFFSNPEID GMR + +AARIEGL +EGE+E E      
Sbjct: 61  KFAETAVHVIPLVLLLCAIVLWFFSNPEIDVGMRGETIAARIEGLTIEGELESEIPILDT 120

Query: 274 AQNEALPILDSTPSTLKIKR 288
           A +     LD   S LKIKR
Sbjct: 121 ASSHHSNQLDDPSSILKIKR 140

[Close]

BLAST of Csor.00g019680 vs. ExPASy TrEMBL
Match: A0A6P5T8H7 (uncharacterized protein LOC110764779 OS=Prunus avium OX=42229 GN=LOC110764779 PE=4 SV=1)

HSP 1 Score: 133 bits (334), Expect = 6.14e-35
Identity = 71/129 (55.04%), Postives = 92/129 (71.32%), Query Frame = 0


Query: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTP-GQALRLSFD--GNEQPTSYPADEIVKREKAR 213
           MHRS SW+R +DEY+   + SP+    P G  + +SFD  G++ P   P  E+ K+E++R
Sbjct: 1   MHRSASWSR-ADEYFMHPNSSPSAGKGPSGLRVSVSFDQGGDQLPVYDPIAELAKKERSR 60

Query: 214 VKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQ 273
           VKFA  AVHVIP+VL+LCA +LWFFSNPEID  ++ DP+AARIEGL +EGEIE +  G Q
Sbjct: 61  VKFAENAVHVIPIVLLLCAFVLWFFSNPEIDVRIKTDPIAARIEGLTLEGEIESDSDGTQ 120

Query: 274 NEALPILDS 279
              LPILDS
Sbjct: 121 TGGLPILDS 128

[Close]

BLAST of Csor.00g019680 vs. ExPASy TrEMBL
Match: A0A0B2RE95 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_027532 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 6.61e-35
Identity = 73/129 (56.59%), Postives = 88/129 (68.22%), Query Frame = 0


Query: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLS---FDGNEQPTSYPADEIVKREKAR 213
           MHRS SWNRFSD+Y+       A +S+P    R S   FDGN  PT  P  E+ KRE+AR
Sbjct: 1   MHRSASWNRFSDDYFKH-----ATTSSPSSGHRSSYSMFDGNNLPTYDPIAELAKRERAR 60

Query: 214 VKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQ 273
           VKFA  AVHVIPLVL++CAI+LW FSNP  D G+  DP+ ARIEGL++EGEIE +  G Q
Sbjct: 61  VKFAENAVHVIPLVLIICAIILWLFSNP--DVGIIGDPIGARIEGLSLEGEIENDSDGTQ 120

Query: 274 NEALPILDS 279
              LPI+ S
Sbjct: 121 MGFLPIVTS 122

[Close]

BLAST of Csor.00g019680 vs. TAIR 10
Match: AT5G61630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 1.4e-23
Identity = 54/118 (45.76%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPT-SYPADEIVKREKARVK 213
           M+RS SWNR  ++Y S+      + S  G       D NE P+ + P +E+VK+EK+R K
Sbjct: 1   MYRSASWNRVPEDYSSAPPKGLWMGSVIG-----PLDENELPSYNNPPEEMVKKEKSRAK 60

Query: 214 FAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGAQ 271
           FA  A+H+IP VL+ CA++LW FSNP++D GMR + +AA+IEGL +EG+I+ +  G Q
Sbjct: 61  FAENAIHIIPFVLLACALVLWLFSNPDVDVGMREESIAAKIEGLTIEGDIDNDSDGTQ 113

[Close]

BLAST of Csor.00g019680 vs. TAIR 10
Match: AT5G07490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61630.1); Has 50 Blast hits to 50 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-22
Identity = 53/121 (43.80%), Postives = 77/121 (63.64%), Query Frame = 0


Query: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNEQPTSYPAD----EIVKREKA 213
           M+RS SWNR +++Y           S P  A +  + G ++    P D    E+ K+EK+
Sbjct: 1   MYRSASWNRVTEDY-----------SVPWSAPKGLWKGLDEDEPAPYDPTGQEMTKKEKS 60

Query: 214 RVKFAATAVHVIPLVLVLCAILLWFFSNPEIDAGMRWDPMAARIEGLNVEGEIEREFGGA 271
           R KFA  AVH+IP VL+ CA++LWFFSNP++D G++ D +AARIEGL +EG+I+ +  G 
Sbjct: 61  RTKFAENAVHIIPFVLLACALVLWFFSNPDVDVGVKGDSIAARIEGLTIEGDIDNDSDGT 110

[Close]

BLAST of Csor.00g019680 vs. TAIR 10
Match: AT2G35658.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-07
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNE--------QPTSYPADEIVK 213
           M RS S +  SD+  S++SPSP+ S      ++ S D ++         P S+P     K
Sbjct: 1   MRRSASASIVSDQ-LSANSPSPSPSP---PRIKTSADSDDSHLLLPRYDPNSHPG----K 60

Query: 214 REKARVKFAATAVHVIPLVLVLCAILLWFFSNP 239
           + K+R + A  A+H IP+VL+LCA++LW FSNP
Sbjct: 61  KNKSRFRSAENAIHFIPIVLILCAVILWMFSNP 85

[Close]

BLAST of Csor.00g019680 vs. TAIR 10
Match: AT2G35658.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-07
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNE--------QPTSYPADEIVK 213
           M RS S +  SD+  S++SPSP+ S      ++ S D ++         P S+P     K
Sbjct: 1   MRRSASASIVSDQ-LSANSPSPSPSP---PRIKTSADSDDSHLLLPRYDPNSHPG----K 60

Query: 214 REKARVKFAATAVHVIPLVLVLCAILLWFFSNP 239
           + K+R + A  A+H IP+VL+LCA++LW FSNP
Sbjct: 61  KNKSRFRSAENAIHFIPIVLILCAVILWMFSNP 85

[Close]

BLAST of Csor.00g019680 vs. TAIR 10
Match: AT2G35658.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-07
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 154 MHRSVSWNRFSDEYYSSSSPSPALSSTPGQALRLSFDGNE--------QPTSYPADEIVK 213
           M RS S +  SD+  S++SPSP+ S      ++ S D ++         P S+P     K
Sbjct: 1   MRRSASASIVSDQ-LSANSPSPSPSP---PRIKTSADSDDSHLLLPRYDPNSHPG----K 60

Query: 214 REKARVKFAATAVHVIPLVLVLCAILLWFFSNP 239
           + K+R + A  A+H IP+VL+LCA++LW FSNP
Sbjct: 61  KNKSRFRSAENAIHFIPIVLILCAVILWMFSNP 85

The following BLAST results are available for this feature:

BLAST of Csor.00g019680 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g019680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600205.1	4.30e-202	100.00	hypothetical protein SDJN03_05438, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7030866.1	4.24e-141	100.00	hypothetical protein SDJN02_04903, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023512832.1	5.51e-93	95.45	uncharacterized protein LOC111777447 [Cucurbita pepo subsp. pepo]	[more]
XP_022942780.1	2.27e-87	97.81	uncharacterized protein LOC111447711 [Cucurbita moschata]	[more]
XP_022986879.1	2.50e-82	94.24	uncharacterized protein LOC111484483 [Cucurbita maxima]	[more]

BLAST of Csor.00g019680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWX5	1.10e-87	97.81	uncharacterized protein LOC111447711 OS=Cucurbita moschata OX=3662 GN=LOC1114477...	[more]
A0A6J1JHB4	1.21e-82	94.24	uncharacterized protein LOC111484483 OS=Cucurbita maxima OX=3661 GN=LOC111484483...	[more]
A0A6J1CG79	2.70e-46	65.71	uncharacterized protein LOC111011394 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6P5T8H7	6.14e-35	55.04	uncharacterized protein LOC110764779 OS=Prunus avium OX=42229 GN=LOC110764779 PE...	[more]
A0A0B2RE95	6.61e-35	56.59	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_027532 PE=4 SV=1	[more]

BLAST of Csor.00g019680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61630.1	1.4e-23	45.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G07490.1	1.6e-22	43.80	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G35658.1	1.1e-07	38.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G35658.2	1.1e-07	38.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G35658.3	1.1e-07	38.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34189:SF4	TRANSMEMBRANE PROTEIN	coord: 154..280
None	No IPR available	PANTHER	PTHR34189	TRANSMEMBRANE PROTEIN	coord: 154..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g019680.m01	Csor.00g019680.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane