Csor.00g019450 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTCATTACAGCTCGCACCATTGCTCTATGCAAACTGATGCTCGTCTTAACAATCATCTTACCCTCCAACAATGTCGCTGCAAGGAATTTACTCGACGTGCCTCGCTTCACTCGTAAGTTAATCACTAGATGTTTTAATGTGATATTATGAACTCTCGACGTCGGTACTCGATGTAATATTGGTCGTCTTTGTAACGTCGTTTTAATGTTGTTGAGTTTTGAATAGATGTGAAACGTGATGAGATGAATAATACAAATGTTGGAGTGCCTAATCCTCCTCAATCACCCGGAGATGGACCGTGGGATATCCCTTGGGATGGTAATGTTTGA ATGGCTTTCATTACAGCTCGCACCATTGCTCTATGCAAACTGATGCTCGTCTTAACAATCATCTTACCCTCCAACAATGTCGCTGCAAGGAATTTACTCGACGTGCCTCGCTTCACTCATGTGAAACGTGATGAGATGAATAATACAAATGTTGGAGTGCCTAATCCTCCTCAATCACCCGGAGATGGACCGTGGGATATCCCTTGGGATGGTAATGTTTGA ATGGCTTTCATTACAGCTCGCACCATTGCTCTATGCAAACTGATGCTCGTCTTAACAATCATCTTACCCTCCAACAATGTCGCTGCAAGGAATTTACTCGACGTGCCTCGCTTCACTCATGTGAAACGTGATGAGATGAATAATACAAATGTTGGAGTGCCTAATCCTCCTCAATCACCCGGAGATGGACCGTGGGATATCCCTTGGGATGGTAATGTTTGA MAFITARTIALCKLMLVLTIILPSNNVAARNLLDVPRFTHVKRDEMNNTNVGVPNPPQSPGDGPWDIPWDGNV Homology
BLAST of Csor.00g019450 vs. NCBI nr
Match: KAG6600182.1 (hypothetical protein SDJN03_05415, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149 bits (377), Expect = 2.02e-45 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of Csor.00g019450 vs. NCBI nr
Match: KAA0044642.1 (hypothetical protein E6C27_scaffold46G003970 [Cucumis melo var. makuwa] >TYK16946.1 hypothetical protein E5676_scaffold130G00830 [Cucumis melo var. makuwa]) HSP 1 Score: 82.8 bits (203), Expect = 6.89e-19 Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of Csor.00g019450 vs. NCBI nr
Match: KAE8649133.1 (hypothetical protein Csa_014439, partial [Cucumis sativus]) HSP 1 Score: 55.8 bits (133), Expect = 6.26e-08 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of Csor.00g019450 vs. NCBI nr
Match: KAE8649132.1 (hypothetical protein Csa_015133 [Cucumis sativus]) HSP 1 Score: 53.9 bits (128), Expect = 1.37e-07 Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 0
BLAST of Csor.00g019450 vs. ExPASy TrEMBL
Match: A0A5A7TMV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00830 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.34e-19 Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of Csor.00g019450 vs. ExPASy TrEMBL
Match: A0A0A0KZ52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G022280 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.18e-08 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|