Csor.00g019410 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCCCAAGCGCCTTTGTTCCTTGGAAGGAGGTAGTCTTCTTCGCTTTGCTTCTTCTGGCTTTCAACGTTTCCGCTAGGGAACTTGTTGGAACCAACATTGTGGCTCGCACTGTCCGTAAGTCTCCTCTTTTTAATAATACCCATCTACCAATGTTGTTTTCACTTTACTTCTTGTTCTTTTTTAATAGATGAGATGACAATAGAGACGAATGTGGGCAGGAGATTGATTGCAAGACAGTTGGATACCTCTTGGGGAGGAAATTATTCTCCTCCTCCCCCTCGTCGTCCTCCTCCTCCGCCTCCTCCTTGTCGTTATACTCCTCGTCCTTCTCTTCCTCGTTCTCGTCCCGGTTCCCGTCCTCTTCCTCCACGCTGA ATGGCTTCCCCAAGCGCCTTTGTTCCTTGGAAGGAGGTAGTCTTCTTCGCTTTGCTTCTTCTGGCTTTCAACGTTTCCGCTAGGGAACTTGTTGGAACCAACATTGTGGCTCGCACTGTCCATGAGATGACAATAGAGACGAATGTGGGCAGGAGATTGATTGCAAGACAGTTGGATACCTCTTGGGGAGGAAATTATTCTCCTCCTCCCCCTCGTCGTCCTCCTCCTCCGCCTCCTCCTTGTCGTTATACTCCTCGTCCTTCTCTTCCTCGTTCTCGTCCCGGTTCCCGTCCTCTTCCTCCACGCTGA ATGGCTTCCCCAAGCGCCTTTGTTCCTTGGAAGGAGGTAGTCTTCTTCGCTTTGCTTCTTCTGGCTTTCAACGTTTCCGCTAGGGAACTTGTTGGAACCAACATTGTGGCTCGCACTGTCCATGAGATGACAATAGAGACGAATGTGGGCAGGAGATTGATTGCAAGACAGTTGGATACCTCTTGGGGAGGAAATTATTCTCCTCCTCCCCCTCGTCGTCCTCCTCCTCCGCCTCCTCCTTGTCGTTATACTCCTCGTCCTTCTCTTCCTCGTTCTCGTCCCGGTTCCCGTCCTCTTCCTCCACGCTGA MASPSAFVPWKEVVFFALLLLAFNVSARELVGTNIVARTVHEMTIETNVGRRLIARQLDTSWGGNYSPPPPRRPPPPPPPCRYTPRPSLPRSRPGSRPLPPR Homology
BLAST of Csor.00g019410 vs. NCBI nr
Match: KAG6600178.1 (hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 196 bits (497), Expect = 7.93e-63 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Csor.00g019410 vs. NCBI nr
Match: KAG7030841.1 (hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 186 bits (472), Expect = 5.01e-59 Identity = 100/102 (98.04%), Postives = 100/102 (98.04%), Query Frame = 0
BLAST of Csor.00g019410 vs. NCBI nr
Match: KAG7014831.1 (hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 97.1 bits (240), Expect = 6.88e-24 Identity = 52/81 (64.20%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of Csor.00g019410 vs. NCBI nr
Match: KAG6576804.1 (hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 94.4 bits (233), Expect = 7.98e-23 Identity = 51/81 (62.96%), Postives = 58/81 (71.60%), Query Frame = 0
BLAST of Csor.00g019410 vs. NCBI nr
Match: KGN57261.1 (hypothetical protein Csa_010292 [Cucumis sativus]) HSP 1 Score: 76.3 bits (186), Expect = 1.22e-15 Identity = 49/80 (61.25%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of Csor.00g019410 vs. ExPASy TrEMBL
Match: A0A0A0LB11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175620 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.92e-16 Identity = 49/80 (61.25%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of Csor.00g019410 vs. ExPASy TrEMBL
Match: A0A0A0L5K7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175610 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 7.59e-12 Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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