Csor.00g015310 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAGAAGGTGCTCGTTCTCTTAGTTGTTTCGTTGCTTCTCGTGATGGGAGATGCTGCGATGCACGGCGTGGTCGAGAAGAAGCATGCACGTAAGCTAGCTCGAAGCTTAGGTGGCCAAACAACTCCTGAAACGGAAGTGTTCAGTGGTGTATATGAGCATGGACCTGAAGATGTCGAAGTTGTTGTTGTTGCTGATGTTGTAACTAATATCGACAATAACAATAACGTAGACGATGATGATGAAAATCTAGGTTATAAAAATTACGGAAAAGGTTCTGACACCGAAACTCATCGTTACTTCTCAAGTGACAAACCATACGAACCTTAA ATGATGAAGAAGGTGCTCGTTCTCTTAGTTGTTTCGTTGCTTCTCGTGATGGGAGATGCTGCGATGCACGGCGTGGTCGAGAAGAAGCATGCACGTAAGCTAGCTCGAAGCTTAGGTGGCCAAACAACTCCTGAAACGGAAGTGTTCAGTGGTGTATATGAGCATGGACCTGAAGATGTCGAAGTTGTTGTTGTTGCTGATGTTGTAACTAATATCGACAATAACAATAACGTAGACGATGATGATGAAAATCTAGGTTATAAAAATTACGGAAAAGGTTCTGACACCGAAACTCATCGTTACTTCTCAAGTGACAAACCATACGAACCTTAA ATGATGAAGAAGGTGCTCGTTCTCTTAGTTGTTTCGTTGCTTCTCGTGATGGGAGATGCTGCGATGCACGGCGTGGTCGAGAAGAAGCATGCACGTAAGCTAGCTCGAAGCTTAGGTGGCCAAACAACTCCTGAAACGGAAGTGTTCAGTGGTGTATATGAGCATGGACCTGAAGATGTCGAAGTTGTTGTTGTTGCTGATGTTGTAACTAATATCGACAATAACAATAACGTAGACGATGATGATGAAAATCTAGGTTATAAAAATTACGGAAAAGGTTCTGACACCGAAACTCATCGTTACTTCTCAAGTGACAAACCATACGAACCTTAA MMKKVLVLLVVSLLLVMGDAAMHGVVEKKHARKLARSLGGQTTPETEVFSGVYEHGPEDVEVVVVADVVTNIDNNNNVDDDDENLGYKNYGKGSDTETHRYFSSDKPYEP Homology
BLAST of Csor.00g015310 vs. NCBI nr
Match: KAG6575119.1 (hypothetical protein SDJN03_25758, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 213 bits (542), Expect = 1.94e-69 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Csor.00g015310 vs. NCBI nr
Match: KAG7013689.1 (hypothetical protein SDJN02_23856, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213 bits (542), Expect = 3.73e-69 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Csor.00g015310 vs. NCBI nr
Match: TYK02960.1 (uncharacterized protein E5676_scaffold46G00430 [Cucumis melo var. makuwa]) HSP 1 Score: 116 bits (290), Expect = 4.75e-31 Identity = 67/110 (60.91%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of Csor.00g015310 vs. NCBI nr
Match: KAG6594018.1 (hypothetical protein SDJN03_13494, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026358.1 hypothetical protein SDJN02_12860, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 112 bits (280), Expect = 1.36e-29 Identity = 68/110 (61.82%), Postives = 76/110 (69.09%), Query Frame = 0
BLAST of Csor.00g015310 vs. NCBI nr
Match: XP_004150985.1 (uncharacterized protein LOC101207042 [Cucumis sativus] >KGN47457.1 hypothetical protein Csa_021763 [Cucumis sativus]) HSP 1 Score: 103 bits (258), Expect = 3.37e-26 Identity = 62/110 (56.36%), Postives = 76/110 (69.09%), Query Frame = 0
BLAST of Csor.00g015310 vs. ExPASy TrEMBL
Match: A0A5D3BV16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00430 PE=4 SV=1) HSP 1 Score: 116 bits (290), Expect = 2.30e-31 Identity = 67/110 (60.91%), Postives = 79/110 (71.82%), Query Frame = 0
BLAST of Csor.00g015310 vs. ExPASy TrEMBL
Match: A0A0A0KGD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327960 PE=4 SV=1) HSP 1 Score: 103 bits (258), Expect = 1.63e-26 Identity = 62/110 (56.36%), Postives = 76/110 (69.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|