Csor.00g015280 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g015280
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr17: 2126539 .. 2127013 (-)
RNA-Seq ExpressionCsor.00g015280
SyntenyCsor.00g015280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATGTGGGAGCCAGGACAGAGGGGAGGAAATGGGAGGCCACTAGGAGTGAGCTGTATCTATCTGTCTGCATGCCAAACAAGGTCCTCCTCCTTTGGATATGAAGTAGGGCAGGTGAAGCTACAAAGAAATACCTCACATAATAAATACATGTAAATTTGGAAAAATCTGAAACTCACATGGATGCCCCAAAAATCTAGGGCTGTCACTGTTCAGCGTGGGTGTACTATAAGTCTCTGTAACCCACATGATTGCCAGAGCCCTCTTCCTGTCTTACTCAAAACATGATTCTCAGCACCAAATTTTGGCCTGCCTGCCTGCCTGCCCGCCCCGCCCCGCCCTGCCATGCCATGCCATGCCCTGCCATGCTTTGCCCTGCCCCCACAAGCAGCGCTTTACTAAACTCAGACATGACAAGATCCTTTCTCCTCCTCTTCCATTGTCTCGGGTTTTAGCCCCACTGGACGACTAG

mRNA sequence

ATGGGGATGTGGGAGCCAGGACAGAGGGGAGGAAATGGGAGGCCACTAGGAGTGAGCTGTATCTATCTGTCTGCATGCCAAACAAGGTCCTCCTCCTTTGGATATGAAGTAGGGCAGCACCAAATTTTGGCCTGCCTGCCTGCCTGCCCGCCCCGCCCCGCCCTGCCATGCCATGCCATGCCCTGCCATGCTTTGCCCTGCCCCCACAAGCAGCGCTTTACTAAACTCAGACATGACAAGATCCTTTCTCCTCCTCTTCCATTGTCTCGGGTTTTAGCCCCACTGGACGACTAG

Coding sequence (CDS)

ATGGGGATGTGGGAGCCAGGACAGAGGGGAGGAAATGGGAGGCCACTAGGAGTGAGCTGTATCTATCTGTCTGCATGCCAAACAAGGTCCTCCTCCTTTGGATATGAAGTAGGGCAGCACCAAATTTTGGCCTGCCTGCCTGCCTGCCCGCCCCGCCCCGCCCTGCCATGCCATGCCATGCCCTGCCATGCTTTGCCCTGCCCCCACAAGCAGCGCTTTACTAAACTCAGACATGACAAGATCCTTTCTCCTCCTCTTCCATTGTCTCGGGTTTTAGCCCCACTGGACGACTAG

Protein sequence

MGMWEPGQRGGNGRPLGVSCIYLSACQTRSSSFGYEVGQHQILACLPACPPRPALPCHAMPCHALPCPHKQRFTKLRHDKILSPPLPLSRVLAPLDD
Homology
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BLAST of Csor.00g015280 vs. NCBI nr
Match: KAG6575122.1 (hypothetical protein SDJN03_25761, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209 bits (532), Expect = 2.51e-68
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MGMWEPGQRGGNGRPLGVSCIYLSACQTRSSSFGYEVGQHQILACLPACPPRPALPCHAM 60
          MGMWEPGQRGGNGRPLGVSCIYLSACQTRSSSFGYEVGQHQILACLPACPPRPALPCHAM
Sbjct: 1  MGMWEPGQRGGNGRPLGVSCIYLSACQTRSSSFGYEVGQHQILACLPACPPRPALPCHAM 60

Query: 61 PCHALPCPHKQRFTKLRHDKILSPPLPLSRVLAPLDD 97
          PCHALPCPHKQRFTKLRHDKILSPPLPLSRVLAPLDD
Sbjct: 61 PCHALPCPHKQRFTKLRHDKILSPPLPLSRVLAPLDD 97

The following BLAST results are available for this feature:
BLAST of Csor.00g015280 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g015280 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6575122.12.51e-68100.00hypothetical protein SDJN03_25761, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g015280 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g015280 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g015280.m01Csor.00g015280.m01mRNA