Csor.00g014520 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCATTGAGTCAGCCCTTTTCCTACTCCTTGTGGCTTTCGGTATGAGCCATGAGAGCGTGGCCCAGTCAGCTGGTTGCACCACGGCGTTGATAAGCTTATCTCCATGCCTAACTTATATCACAGGCAGCGGAGGCTCTTCCACTTCTACTGCTCCATCTTCTTCTTGCTGCTCGCGCCTTGCCACCGTGGTTCAATCGCAGCCACAGTGCCTTTGCTCGGCGCTCAATGGTGGCGCTGCGGTTTCTCTCGGTGTCACTATCAACCGGACTCGAGCTCTTGGGCTTCCTGTTGCCTGTAGTGTTCAAACGCCGCCACCCAGCCGCTGTAATGGTAACCAAATTCTATTCTTTTCAACTTGCACCTGGCGCTTCTAAATATAGTCAATCGTCCCTCTTGTTTACATCATTTTTTCAATTTCGTCTCTCTTGTTTACATCATTCTTCAATTTCGTCTCTAATTTTCCAAAATTCTCAACTTTACATTCTAGCATATTTTAAATTCTCAATTAGGGTCCGAATAAAAAATATTAATTAGCAACACAACAATTACGCATGTTATTTTAATAAAATAAAAAAAAAAAAAAAGATTTAAGTTTTAGTGAAAAAAATTAAATACGTAATTGTTGAGTTAAAAAAGTATATGCAATTTTGTTTTTGGTGAGCAGAATGGAGTTGAGGATTTAAAAAGATTGAAAATGACCTTACATGATTAGAATATTTTATATTTTCCGGATGGCAATGATGAATTCCACAACAGTAGAGACAAATTTTTAGTTAAAATGCCGAAGACAGACTCAAAGAGTGGTGGAGGACATCATCATATAAACACTAACTTGGATGTGAAAACACACAGATGCTAATGGAGCTGCTGCTGCTCCAGCAATATCTCCGATAAGTTCGCCGGGGAATTCACCTTCAGATGACGAAGAACTTGGTGAAGCTCCAACAACACGGGAACTACTTTTCCTTCGGAAGTAG ATGGGCATTGAGTCAGCCCTTTTCCTACTCCTTGTGGCTTTCGGTATGAGCCATGAGAGCGTGGCCCAGTCAGCTGGTTGCACCACGGCGTTGATAAGCTTATCTCCATGCCTAACTTATATCACAGGCAGCGGAGGCTCTTCCACTTCTACTGCTCCATCTTCTTCTTGCTGCTCGCGCCTTGCCACCGTGGTTCAATCGCAGCCACAGTGCCTTTGCTCGGCGCTCAATGGTGGCGCTGCGGTTTCTCTCGGTGTCACTATCAACCGGACTCGAGCTCTTGGGCTTCCTGTTGCCTGTAGTGTTCAAACGCCGCCACCCAGCCGCTGTAATGATGCTAATGGAGCTGCTGCTGCTCCAGCAATATCTCCGATAAGTTCGCCGGGGAATTCACCTTCAGATGACGAAGAACTTGGTGAAGCTCCAACAACACGGGAACTACTTTTCCTTCGGAAGTAG ATGGGCATTGAGTCAGCCCTTTTCCTACTCCTTGTGGCTTTCGGTATGAGCCATGAGAGCGTGGCCCAGTCAGCTGGTTGCACCACGGCGTTGATAAGCTTATCTCCATGCCTAACTTATATCACAGGCAGCGGAGGCTCTTCCACTTCTACTGCTCCATCTTCTTCTTGCTGCTCGCGCCTTGCCACCGTGGTTCAATCGCAGCCACAGTGCCTTTGCTCGGCGCTCAATGGTGGCGCTGCGGTTTCTCTCGGTGTCACTATCAACCGGACTCGAGCTCTTGGGCTTCCTGTTGCCTGTAGTGTTCAAACGCCGCCACCCAGCCGCTGTAATGATGCTAATGGAGCTGCTGCTGCTCCAGCAATATCTCCGATAAGTTCGCCGGGGAATTCACCTTCAGATGACGAAGAACTTGGTGAAGCTCCAACAACACGGGAACTACTTTTCCTTCGGAAGTAG MGIESALFLLLVAFGMSHESVAQSAGCTTALISLSPCLTYITGSGGSSTSTAPSSSCCSRLATVVQSQPQCLCSALNGGAAVSLGVTINRTRALGLPVACSVQTPPPSRCNDANGAAAAPAISPISSPGNSPSDDEELGEAPTTRELLFLRK Homology
BLAST of Csor.00g014520 vs. ExPASy Swiss-Prot
Match: Q9LJ86 (Non-specific lipid transfer protein GPI-anchored 5 OS=Arabidopsis thaliana OX=3702 GN=LTPG5 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 8.7e-25 Identity = 63/125 (50.40%), Postives = 83/125 (66.40%), Query Frame = 0
BLAST of Csor.00g014520 vs. ExPASy Swiss-Prot
Match: Q7EB72 (Non-specific lipid transfer protein GPI-anchored 15 OS=Arabidopsis thaliana OX=3702 GN=LTPG15 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.4e-19 Identity = 60/127 (47.24%), Postives = 79/127 (62.20%), Query Frame = 0
BLAST of Csor.00g014520 vs. ExPASy Swiss-Prot
Match: F4HZB9 (Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3702 GN=LTPG19 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.5e-19 Identity = 60/139 (43.17%), Postives = 78/139 (56.12%), Query Frame = 0
BLAST of Csor.00g014520 vs. ExPASy Swiss-Prot
Match: Q2PE59 (Non-specific lipid transfer protein GPI-anchored 26 OS=Arabidopsis thaliana OX=3702 GN=LTPG26 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.7e-15 Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = 0
BLAST of Csor.00g014520 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11 Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 0
BLAST of Csor.00g014520 vs. NCBI nr
Match: KAG6606419.1 (Non-specific lipid transfer protein GPI-anchored 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036357.1 Non-specific lipid transfer protein GPI-anchored 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 285 bits (729), Expect = 1.33e-96 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Csor.00g014520 vs. NCBI nr
Match: XP_022931068.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita moschata]) HSP 1 Score: 274 bits (701), Expect = 1.73e-91 Identity = 146/149 (97.99%), Postives = 146/149 (97.99%), Query Frame = 0
BLAST of Csor.00g014520 vs. NCBI nr
Match: XP_023534720.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 270 bits (691), Expect = 5.77e-90 Identity = 144/149 (96.64%), Postives = 146/149 (97.99%), Query Frame = 0
BLAST of Csor.00g014520 vs. NCBI nr
Match: XP_022996122.1 (non-specific lipid-transfer protein-like protein At2g13820 [Cucurbita maxima]) HSP 1 Score: 263 bits (672), Expect = 2.54e-87 Identity = 140/146 (95.89%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Csor.00g014520 vs. NCBI nr
Match: XP_038888862.1 (non-specific lipid transfer protein GPI-anchored 19-like [Benincasa hispida]) HSP 1 Score: 177 bits (449), Expect = 2.04e-53 Identity = 99/145 (68.28%), Postives = 116/145 (80.00%), Query Frame = 0
BLAST of Csor.00g014520 vs. ExPASy TrEMBL
Match: A0A6J1EXB7 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita moschata OX=3662 GN=LOC111437366 PE=4 SV=1) HSP 1 Score: 274 bits (701), Expect = 8.38e-92 Identity = 146/149 (97.99%), Postives = 146/149 (97.99%), Query Frame = 0
BLAST of Csor.00g014520 vs. ExPASy TrEMBL
Match: A0A6J1K123 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucurbita maxima OX=3661 GN=LOC111491438 PE=4 SV=1) HSP 1 Score: 263 bits (672), Expect = 1.23e-87 Identity = 140/146 (95.89%), Postives = 142/146 (97.26%), Query Frame = 0
BLAST of Csor.00g014520 vs. ExPASy TrEMBL
Match: A0A1S3BLF1 (non-specific lipid-transfer protein-like protein At2g13820 OS=Cucumis melo OX=3656 GN=LOC103491327 PE=4 SV=1) HSP 1 Score: 166 bits (421), Expect = 2.67e-49 Identity = 94/140 (67.14%), Postives = 113/140 (80.71%), Query Frame = 0
BLAST of Csor.00g014520 vs. ExPASy TrEMBL
Match: A0A0A0KGC1 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G410100 PE=4 SV=1) HSP 1 Score: 166 bits (420), Expect = 3.46e-49 Identity = 97/145 (66.90%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of Csor.00g014520 vs. ExPASy TrEMBL
Match: A0A5A7UN30 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00410 PE=4 SV=1) HSP 1 Score: 164 bits (416), Expect = 8.86e-49 Identity = 92/131 (70.23%), Postives = 109/131 (83.21%), Query Frame = 0
BLAST of Csor.00g014520 vs. TAIR 10
Match: AT3G22600.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 114.8 bits (286), Expect = 6.2e-26 Identity = 63/125 (50.40%), Postives = 83/125 (66.40%), Query Frame = 0
BLAST of Csor.00g014520 vs. TAIR 10
Match: AT2G48130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20 Identity = 60/127 (47.24%), Postives = 79/127 (62.20%), Query Frame = 0
BLAST of Csor.00g014520 vs. TAIR 10
Match: AT1G03103.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 96.7 bits (239), Expect = 1.7e-20 Identity = 60/139 (43.17%), Postives = 78/139 (56.12%), Query Frame = 0
BLAST of Csor.00g014520 vs. TAIR 10
Match: AT4G14815.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 82.8 bits (203), Expect = 2.6e-16 Identity = 44/106 (41.51%), Postives = 66/106 (62.26%), Query Frame = 0
BLAST of Csor.00g014520 vs. TAIR 10
Match: AT3G43720.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12 Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|