Csor.00g013450 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g013450
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein XRI1-like
Location	Csor_Chr02: 9836075 .. 9838539 (+)
RNA-Seq Expression	Csor.00g013450
Synteny	Csor.00g013450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGATTCCGCCAAAAACAAGTAAAATCATCGCCCTCAACCTTCTGCTCTTTCTGTTTGTTTCTGTGATTGATTTTGTTTTCTGGGGCTTTCTTTTGCGATTTGCTGTAATGCGTTTTTTCTGGAAGATCTAGTACTTCTTGTTGATTTCTTATTTGGAGGAAGCTGCTTTGGGTTTTTGTTTCAGATTGGTGTGGGGAGTTTTGGGAGTTTGTTGTCGGATTGAGTTGTTTCTTTGATTTACCTTGATTTTCTTGCTCTGTAATCGGTAATTTGTGGTTGAAATGGAAATGAGGATGCGGCTGTTAGATCTAATTTAAGTAGTGGCCATTGCATTACTGTTTTCTTTTGTGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTTTGACGGCTTGTTTTGTCATCAATGTACTGGGACATCCAGAGCTAATGACTCGCTATGTTGTTTGTAGTGTTCTTGCGGTTTTGTCCTCTTTCGGATCCCAATTGTTTAATCATTTCCTTGTCAGATAAATGGTTGTTGTTTTGTTCATTTGTTGAGAAAATCCTCCCCTTACTCCTCAAGAAGCGTGGCTTAGTGTGCTAATAGATTGAACCAAATTGTTTTCCATTTCTCTTTTGGTAGTAAGTGCTGCATCTTCATAATCGTACATTCTTGTTGCTTTAATGTGTAATTTTTCAGTGATTCTTGGAATTGGGATGGAGATGGATATACCATCCAGAAGGATACCGATTTAGGTGAGTAGTTTCTGGTTTGTTTTGTTTTTTATGCATTATGTAATCTTGTAGGTGTTATGCTTGCTCATTCTTGGTATCTCTTTTGTTGTCATTGTCATGAACTTATATCAGAATGCCTTTGGGACGGGGTGTCTGAAAATGATGATCTTTCGTATGTGTTCGATGAAACAACTCCGGTTAAAGCTTGCGGGGACTTGGCATACCATGTCACGCATAATGGTAAGGACTTTACACCCTTCTCTAACCCCTCAGTTACATCCAAGGAAATCGTTTTTTCTGAAGTTTACACTTGTATTCAGATGACAGAAACAAGAAATCAGAAGAATCCAGGGAAACTCATTCACAAGCGAAGAGACGTCGGATGTTACAGTTTACTGCACAAGATATAGAAACTTCACTCTGCTGTGAAGATTTGTCTTCTAGATTTCTAAAATCACATGTAAGTGATATGCAATTCCTGCTTCTCTTGATAAGCAAGTGTACATTATGACCAAAGGATTCAGGAAGACTTGTGTCGAACGCGTTAATTTTTCAAGTTATATGTTATTGCGTCCTATGTATTTGCCAATTATTTTGCTGCATGGAGCTAAATGTCGATCTTTAATATTCGGCAGACAAGGTTTAATGACGAACAACACTGATAGGAGTTTACTTTGTCTTTTTAAATAGCTTAACGAATGTAAATATCTATGTTCCGAAGCAGGCTTCTCATGTGTCTTTTCTGTAAAGTACGACCGTGACACCATGCAACCAAACTATATAATTTGTGTGAAATTTGTAACGTTGTTTTGTTCTATTTTCAGAATAAGGATGTTTCTAGTCCTGCTGCTGTACCTGATGTTCCATACGAGATTCCCGAGTGCTCTGGACTCTCAGGTTTGTCTCGAGCAAGATACTACTTAATGTTAAAATCGTATATCGATGTATTTGTTTGCCTCTTGGTTTGTCTGATCTCTATATATTTGCCTTAGCTAATGTGCCGACTTCTTGTCTTGAGAATTTGGATCACTCACCTGAAGGTTGGATTGCTGATTGCCTTAATGATGCTGATATGCATTGCAGCCCTGAGGATTTGTATGTGCCTTGTGTGCATCCATTTTTTTTAATTATTAGTTTCAATTATATGAATTCCTTATAATGTGGAACTCAGGAACTTTGCTGGGACTTCGGACAATCAAATCGATGTATCAGGTAAAGTAAAATGTTGTTACGGTTTGTGTTCGTTTATATATCATTATGAAAGATGACTGTGGTTAATTTGAACTTGTGTAGAGTTTTGTAATGTTGCACCTGAGTTCAAATCTAACGCGGTCCAACATCATCCTACTCGAGTTCCTCGGAACATAATATTTAAAGGTTCTATTCTGCTCTTGACCTTTTGAAGGTTTCTTTACAATGTTGATATACCGTGTTCATTGCTTTACGTTCCCACATTGCCTATACGTGCAGGTCGAAAGTCGTATATTAGAACTCCGACTAAGTTAGCTTCTTCAGTTGCCTACCCATTTGCCTTCATCAAGCCCTGTGGATTCCATGGAGATGTCACCTTGAAGGACATAAACCAGCGGATCCGCACGCCTCCACCTTCAAAACTGAAGCATCAACCTGAAGACCCATCTCAATCATACCCAACATCAGCCTTCTCCGGTAAGCCCGTCGTCGGTAAAACCAAGATTCATACTGAAGGTGGAAAGGGCAGCATTACAATCATGAGGACCAGAGGTTGA

mRNA sequence

ATGGACGATTCCGCCAAAAACAATGATTCTTGGAATTGGGATGGAGATGGATATACCATCCAGAAGGATACCGATTTAGAATGCCTTTGGGACGGGGTGTCTGAAAATGATGATCTTTCGTATGTGTTCGATGAAACAACTCCGGTTAAAGCTTGCGGGGACTTGGCATACCATGTCACGCATAATGATGACAGAAACAAGAAATCAGAAGAATCCAGGGAAACTCATTCACAAGCGAAGAGACGTCGGATGTTACAGTTTACTGCACAAGATATAGAAACTTCACTCTGCTGTGAAGATTTGTCTTCTAGATTTCTAAAATCACATAATAAGGATGTTTCTAGTCCTGCTGCTGTACCTGATGTTCCATACGAGATTCCCGAGTGCTCTGGACTCTCAGCTAATGTGCCGACTTCTTGTCTTGAGAATTTGGATCACTCACCTGAAGGTTGGATTGCTGATTGCCTTAATGATGCTGATATGCATTGCAGCCCTGAGGATTTGAACTTTGCTGGGACTTCGGACAATCAAATCGATGTATCAGAGTTTTGTAATGTTGCACCTGAGTTCAAATCTAACGCGGTCCAACATCATCCTACTCGAGTTCCTCGGAACATAATATTTAAAGGTCGAAAGTCGTATATTAGAACTCCGACTAAGTTAGCTTCTTCAGTTGCCTACCCATTTGCCTTCATCAAGCCCTGTGGATTCCATGGAGATGTCACCTTGAAGGACATAAACCAGCGGATCCGCACGCCTCCACCTTCAAAACTGAAGCATCAACCTGAAGACCCATCTCAATCATACCCAACATCAGCCTTCTCCGGTAAGCCCGTCGTCGGTAAAACCAAGATTCATACTGAAGGTGGAAAGGGCAGCATTACAATCATGAGGACCAGAGGTTGA

Coding sequence (CDS)

ATGGACGATTCCGCCAAAAACAATGATTCTTGGAATTGGGATGGAGATGGATATACCATCCAGAAGGATACCGATTTAGAATGCCTTTGGGACGGGGTGTCTGAAAATGATGATCTTTCGTATGTGTTCGATGAAACAACTCCGGTTAAAGCTTGCGGGGACTTGGCATACCATGTCACGCATAATGATGACAGAAACAAGAAATCAGAAGAATCCAGGGAAACTCATTCACAAGCGAAGAGACGTCGGATGTTACAGTTTACTGCACAAGATATAGAAACTTCACTCTGCTGTGAAGATTTGTCTTCTAGATTTCTAAAATCACATAATAAGGATGTTTCTAGTCCTGCTGCTGTACCTGATGTTCCATACGAGATTCCCGAGTGCTCTGGACTCTCAGCTAATGTGCCGACTTCTTGTCTTGAGAATTTGGATCACTCACCTGAAGGTTGGATTGCTGATTGCCTTAATGATGCTGATATGCATTGCAGCCCTGAGGATTTGAACTTTGCTGGGACTTCGGACAATCAAATCGATGTATCAGAGTTTTGTAATGTTGCACCTGAGTTCAAATCTAACGCGGTCCAACATCATCCTACTCGAGTTCCTCGGAACATAATATTTAAAGGTCGAAAGTCGTATATTAGAACTCCGACTAAGTTAGCTTCTTCAGTTGCCTACCCATTTGCCTTCATCAAGCCCTGTGGATTCCATGGAGATGTCACCTTGAAGGACATAAACCAGCGGATCCGCACGCCTCCACCTTCAAAACTGAAGCATCAACCTGAAGACCCATCTCAATCATACCCAACATCAGCCTTCTCCGGTAAGCCCGTCGTCGGTAAAACCAAGATTCATACTGAAGGTGGAAAGGGCAGCATTACAATCATGAGGACCAGAGGTTGA

Protein sequence

MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVSEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG

Homology

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BLAST of Csor.00g013450 vs. ExPASy Swiss-Prot
Match: Q6NLW5 (Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2)

HSP 1 Score: 259.6 bits (662), Expect = 4.3e-68
Identity = 158/300 (52.67%), Postives = 190/300 (63.33%), Query Frame = 0


Query: 8   NDSWNWDGDGYTIQKDTDL----ECLWDGVSEN-DDLSYVF-DETTPVKACGDLAYHVTH 67
           + SWNW  D Y  Q  +      +C    V+ N +D SY+F DE TPVKAC +L YHVT 
Sbjct: 9   SSSWNWQVDNYNHQPQSHFSDVPDCTMTEVTLNQEDHSYMFDDENTPVKACSELGYHVT- 68

Query: 68  NDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVPD 127
            +D N+K E   ET S  KRRRMLQF  Q  ETSL   +  S  LKS  +D +    +P+
Sbjct: 69  TEDTNRKMEVHSETRSALKRRRMLQFEDQP-ETSLFSSESFSAILKSSARDDTFDELLPE 128

Query: 128 VPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVS 187
               I    G S +   S  E LD   E W ADCLNDA+    P+DLNF G+ D Q+D+S
Sbjct: 129 GSQLI---EGFSEDASASSFEGLDLYAEEWYADCLNDAETPMLPDDLNF-GSPDVQVDIS 188

Query: 188 EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDV 247
           E+ NV PE ++  VQ   TR   N+IFKGRKS+ R  +KL SS+ YPFAFIKPCG HG +
Sbjct: 189 EYLNVPPETETREVQRPVTRSSPNVIFKGRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGM 248

Query: 248 TLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 302
           TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSITIMRTRG
Sbjct: 249 TLKDINQKIRN-PPAKPKAHIEEPA-VIQTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300

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BLAST of Csor.00g013450 vs. NCBI nr
Match: XP_022930895.1 (protein XRI1-like [Cucurbita moschata] >XP_023532484.1 protein XRI1-like [Cucurbita pepo subsp. pepo] >KAG6606314.1 Protein XRI1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 620 bits (1598), Expect = 3.92e-224
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60
           MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT
Sbjct: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60

Query: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120
           HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP
Sbjct: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120

Query: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180
           DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV
Sbjct: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180

Query: 181 SEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGD 240
           SEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGD
Sbjct: 181 SEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGD 240

Query: 241 VTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTR 300
           VTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTR
Sbjct: 241 VTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTR 300

[Close]

BLAST of Csor.00g013450 vs. NCBI nr
Match: KAG7036253.1 (Protein XRI1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 613 bits (1580), Expect = 2.83e-221
Identity = 301/308 (97.73%), Postives = 301/308 (97.73%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60
           MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT
Sbjct: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60

Query: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120
           HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP
Sbjct: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120

Query: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180
           DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV
Sbjct: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180

Query: 181 S-------EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK 240
           S       EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK
Sbjct: 181 SGKVKCCYEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIK 240

Query: 241 PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS 300
           PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS
Sbjct: 241 PCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGS 300

[Close]

BLAST of Csor.00g013450 vs. NCBI nr
Match: XP_022995967.1 (protein XRI1-like [Cucurbita maxima])

HSP 1 Score: 612 bits (1579), Expect = 3.09e-221
Identity = 297/301 (98.67%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60
           MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT
Sbjct: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60

Query: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120
           HNDD NKKSEESRETHSQAKRRRMLQFTAQD+ETSLCCEDLSSRFLKSHNKDVSSPAA+P
Sbjct: 61  HNDDSNKKSEESRETHSQAKRRRMLQFTAQDLETSLCCEDLSSRFLKSHNKDVSSPAALP 120

Query: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180
           DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV
Sbjct: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180

Query: 181 SEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGD 240
           SEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGD
Sbjct: 181 SEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGD 240

Query: 241 VTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTR 300
           VTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEG KGSITIMRTR
Sbjct: 241 VTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGRKGSITIMRTR 300

[Close]

BLAST of Csor.00g013450 vs. NCBI nr
Match: XP_004144384.1 (protein XRI1 [Cucumis sativus] >KGN58364.1 hypothetical protein Csa_001887 [Cucumis sativus])

HSP 1 Score: 549 bits (1414), Expect = 4.90e-196
Identity = 271/304 (89.14%), Postives = 285/304 (93.75%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLE---CLWDGVSENDDLSYVFDETTPVKACGDLAY 60
           MDD+AKNND+WNW+GDGYTIQKDTD+E   CLWDGVSEN DLSYVFDETTPVKACGDLAY
Sbjct: 1   MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAY 60

Query: 61  HVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPA 120
           HVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETS+C EDLSSRFLKSHNK VSSPA
Sbjct: 61  HVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSRFLKSHNKVVSSPA 120

Query: 121 AVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQ 180
           A+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL+FAGTSD Q
Sbjct: 121 ALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQ 180

Query: 181 IDVSEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF 240
           IDVSEFC+ APEFKSN VQHHPTR P NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF
Sbjct: 181 IDVSEFCDGAPEFKSNVVQHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF 240

Query: 241 HGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIM 300
           HGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGGKGSITIM
Sbjct: 241 HGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM 300

[Close]

BLAST of Csor.00g013450 vs. NCBI nr
Match: XP_008461886.1 (PREDICTED: protein XRI1 isoform X2 [Cucumis melo])

HSP 1 Score: 548 bits (1412), Expect = 9.88e-196
Identity = 272/304 (89.47%), Postives = 283/304 (93.09%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLE---CLWDGVSENDDLSYVFDETTPVKACGDLAY 60
           MDD+AKNND+WNW+GDGYTIQKDTD+E   CLWDGVSEN DLSYVFDETTPVKACGDLAY
Sbjct: 1   MDDTAKNNDAWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAY 60

Query: 61  HVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPA 120
           HVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETSLC EDLSSRFLKSHNKDVSS A
Sbjct: 61  HVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSSRFLKSHNKDVSSLA 120

Query: 121 AVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQ 180
           A+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL FAGTSD Q
Sbjct: 121 ALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLGFAGTSDIQ 180

Query: 181 IDVSEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF 240
           IDVSEFC+ APEFKSN V HHPTR P NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF
Sbjct: 181 IDVSEFCDGAPEFKSNVVHHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF 240

Query: 241 HGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIM 300
           HGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIM
Sbjct: 241 HGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIM 300

[Close]

BLAST of Csor.00g013450 vs. ExPASy TrEMBL
Match: A0A6J1EY26 (protein XRI1-like OS=Cucurbita moschata OX=3662 GN=LOC111437252 PE=4 SV=1)

HSP 1 Score: 620 bits (1598), Expect = 1.90e-224
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60
           MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT
Sbjct: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60

Query: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120
           HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP
Sbjct: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120

Query: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180
           DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV
Sbjct: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180

Query: 181 SEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGD 240
           SEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGD
Sbjct: 181 SEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGD 240

Query: 241 VTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTR 300
           VTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTR
Sbjct: 241 VTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTR 300

[Close]

BLAST of Csor.00g013450 vs. ExPASy TrEMBL
Match: A0A6J1K0G1 (protein XRI1-like OS=Cucurbita maxima OX=3661 GN=LOC111491323 PE=4 SV=1)

HSP 1 Score: 612 bits (1579), Expect = 1.50e-221
Identity = 297/301 (98.67%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60
           MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT
Sbjct: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLECLWDGVSENDDLSYVFDETTPVKACGDLAYHVT 60

Query: 61  HNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVP 120
           HNDD NKKSEESRETHSQAKRRRMLQFTAQD+ETSLCCEDLSSRFLKSHNKDVSSPAA+P
Sbjct: 61  HNDDSNKKSEESRETHSQAKRRRMLQFTAQDLETSLCCEDLSSRFLKSHNKDVSSPAALP 120

Query: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180
           DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV
Sbjct: 121 DVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDV 180

Query: 181 SEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGD 240
           SEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGD
Sbjct: 181 SEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGD 240

Query: 241 VTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTR 300
           VTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEG KGSITIMRTR
Sbjct: 241 VTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGRKGSITIMRTR 300

[Close]

BLAST of Csor.00g013450 vs. ExPASy TrEMBL
Match: A0A0A0LBN6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G628730 PE=4 SV=1)

HSP 1 Score: 549 bits (1414), Expect = 2.37e-196
Identity = 271/304 (89.14%), Postives = 285/304 (93.75%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLE---CLWDGVSENDDLSYVFDETTPVKACGDLAY 60
           MDD+AKNND+WNW+GDGYTIQKDTD+E   CLWDGVSEN DLSYVFDETTPVKACGDLAY
Sbjct: 1   MDDAAKNNDTWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAY 60

Query: 61  HVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPA 120
           HVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETS+C EDLSSRFLKSHNK VSSPA
Sbjct: 61  HVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSICREDLSSRFLKSHNKVVSSPA 120

Query: 121 AVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQ 180
           A+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL+FAGTSD Q
Sbjct: 121 ALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQ 180

Query: 181 IDVSEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF 240
           IDVSEFC+ APEFKSN VQHHPTR P NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF
Sbjct: 181 IDVSEFCDGAPEFKSNVVQHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF 240

Query: 241 HGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIM 300
           HGDVTLKDINQRIRTPPPSKLKHQPEDPS+SYPTSAFSGKPVVGKTKIHTEGGKGSITIM
Sbjct: 241 HGDVTLKDINQRIRTPPPSKLKHQPEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIM 300

[Close]

BLAST of Csor.00g013450 vs. ExPASy TrEMBL
Match: A0A1S3CFL6 (protein XRI1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500376 PE=4 SV=1)

HSP 1 Score: 548 bits (1412), Expect = 4.78e-196
Identity = 272/304 (89.47%), Postives = 283/304 (93.09%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLE---CLWDGVSENDDLSYVFDETTPVKACGDLAY 60
           MDD+AKNND+WNW+GDGYTIQKDTD+E   CLWDGVSEN DLSYVFDETTPVKACGDLAY
Sbjct: 1   MDDTAKNNDAWNWEGDGYTIQKDTDIEISECLWDGVSENGDLSYVFDETTPVKACGDLAY 60

Query: 61  HVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPA 120
           HVT +DDRNKKSEESRETHSQAKRRRMLQFTAQD+ETSLC EDLSSRFLKSHNKDVSS A
Sbjct: 61  HVTCSDDRNKKSEESRETHSQAKRRRMLQFTAQDLETSLCREDLSSRFLKSHNKDVSSLA 120

Query: 121 AVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQ 180
           A+ +V Y IPECSGL+ NV  SC ENLDHSPEGWIA+CLNDADMHCSPEDL FAGTSD Q
Sbjct: 121 ALAEVSYGIPECSGLADNVLISCHENLDHSPEGWIAECLNDADMHCSPEDLGFAGTSDIQ 180

Query: 181 IDVSEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF 240
           IDVSEFC+ APEFKSN V HHPTR P NIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF
Sbjct: 181 IDVSEFCDGAPEFKSNVVHHHPTRAPPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF 240

Query: 241 HGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIM 300
           HGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIM
Sbjct: 241 HGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIM 300

[Close]

BLAST of Csor.00g013450 vs. ExPASy TrEMBL
Match: A0A6J1E034 (protein XRI1 OS=Momordica charantia OX=3673 GN=LOC111026161 PE=4 SV=1)

HSP 1 Score: 545 bits (1403), Expect = 1.13e-194
Identity = 268/304 (88.16%), Postives = 280/304 (92.11%), Query Frame = 0


Query: 1   MDDSAKNNDSWNWDGDGYTIQKDTDLEC---LWDGVSENDDLSYVFDETTPVKACGDLAY 60
           MDD+ KNND+W+WDGDGY IQKD DLE    +WDGVSENDDLSYV DETTPVKACGDLAY
Sbjct: 1   MDDAGKNNDTWDWDGDGYCIQKDNDLEIPESIWDGVSENDDLSYVLDETTPVKACGDLAY 60

Query: 61  HVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPA 120
           HV ++D RNKKSEESRETHSQAKRRRMLQF AQD+ TSLC EDLSSRFLKS NKDVSSPA
Sbjct: 61  HVAYSDGRNKKSEESRETHSQAKRRRMLQFNAQDMGTSLCSEDLSSRFLKSLNKDVSSPA 120

Query: 121 AVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQ 180
           A+P+VPY IPECSGLS NVP SC ENLDHSPEGWI++C NDADMHCSPEDLNFAGTSD Q
Sbjct: 121 ALPEVPYGIPECSGLSDNVPISCHENLDHSPEGWISECFNDADMHCSPEDLNFAGTSDIQ 180

Query: 181 IDVSEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF 240
           IDVSEFC+V PE KSNAVQHHPTR PRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF
Sbjct: 181 IDVSEFCDVMPELKSNAVQHHPTRAPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGF 240

Query: 241 HGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIM 300
           HGDVTLKDINQRIRTPPPSKLKH PEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIM
Sbjct: 241 HGDVTLKDINQRIRTPPPSKLKHHPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIM 300

[Close]

BLAST of Csor.00g013450 vs. TAIR 10
Match: AT5G48720.2 (x-ray induced transcript 1 )

HSP 1 Score: 259.6 bits (662), Expect = 3.1e-69
Identity = 158/300 (52.67%), Postives = 190/300 (63.33%), Query Frame = 0


Query: 8   NDSWNWDGDGYTIQKDTDL----ECLWDGVSEN-DDLSYVF-DETTPVKACGDLAYHVTH 67
           + SWNW  D Y  Q  +      +C    V+ N +D SY+F DE TPVKAC +L YHVT 
Sbjct: 9   SSSWNWQVDNYNHQPQSHFSDVPDCTMTEVTLNQEDHSYMFDDENTPVKACSELGYHVT- 68

Query: 68  NDDRNKKSEESRETHSQAKRRRMLQFTAQDIETSLCCEDLSSRFLKSHNKDVSSPAAVPD 127
            +D N+K E   ET S  KRRRMLQF  Q  ETSL   +  S  LKS  +D +    +P+
Sbjct: 69  TEDTNRKMEVHSETRSALKRRRMLQFEDQP-ETSLFSSESFSAILKSSARDDTFDELLPE 128

Query: 128 VPYEIPECSGLSANVPTSCLENLDHSPEGWIADCLNDADMHCSPEDLNFAGTSDNQIDVS 187
               I    G S +   S  E LD   E W ADCLNDA+    P+DLNF G+ D Q+D+S
Sbjct: 129 GSQLI---EGFSEDASASSFEGLDLYAEEWYADCLNDAETPMLPDDLNF-GSPDVQVDIS 188

Query: 188 EFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDV 247
           E+ NV PE ++  VQ   TR   N+IFKGRKS+ R  +KL SS+ YPFAFIKPCG HG +
Sbjct: 189 EYLNVPPETETREVQRPVTRSSPNVIFKGRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGM 248

Query: 248 TLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 302
           TLKDINQ+IR  PP+K K   E+P+    TSAFSGKPVVGKTKI TEGGKGSITIMRTRG
Sbjct: 249 TLKDINQKIRN-PPAKPKAHIEEPA-VIQTSAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300

[Close]

BLAST of Csor.00g013450 vs. TAIR 10
Match: AT5G48720.1 (x-ray induced transcript 1 )

HSP 1 Score: 250.0 bits (637), Expect = 2.4e-66
Identity = 148/266 (55.64%), Postives = 176/266 (66.17%), Query Frame = 0


Query: 37  DDLSYVF-DETTPVKACGDLAYHVTHNDDRNKKSEESRETHSQAKRRRMLQFTAQDIETS 96
           +D SY+F DE TPVKAC +L YHVT  +D N+K E   ET S  KRRRMLQF  Q  ETS
Sbjct: 9   EDHSYMFDDENTPVKACSELGYHVT-TEDTNRKMEVHSETRSALKRRRMLQFEDQP-ETS 68

Query: 97  LCCEDLSSRFLKSHNKDVSSPAAVPDVPYEIPECSGLSANVPTSCLENLDHSPEGWIADC 156
           L   +  S  LKS  +D +    +P+    I    G S +   S  E LD   E W ADC
Sbjct: 69  LFSSESFSAILKSSARDDTFDELLPEGSQLI---EGFSEDASASSFEGLDLYAEEWYADC 128

Query: 157 LNDADMHCSPEDLNFAGTSDNQIDVSEFCNVAPEFKSNAVQHHPTRVPRNIIFKGRKSYI 216
           LNDA+    P+DLNF G+ D Q+D+SE+ NV PE ++  VQ   TR   N+IFKGRKS+ 
Sbjct: 129 LNDAETPMLPDDLNF-GSPDVQVDISEYLNVPPETETREVQRPVTRSSPNVIFKGRKSFS 188

Query: 217 RTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQPEDPSQSYPTSAFS 276
           R  +KL SS+ YPFAFIKPCG HG +TLKDINQ+IR  PP+K K   E+P+    TSAFS
Sbjct: 189 RPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRN-PPAKPKAHIEEPA-VIQTSAFS 248

Query: 277 GKPVVGKTKIHTEGGKGSITIMRTRG 302
           GKPVVGKTKI TEGGKGSITIMRTRG
Sbjct: 249 GKPVVGKTKIRTEGGKGSITIMRTRG 266

The following BLAST results are available for this feature:

BLAST of Csor.00g013450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLW5	4.3e-68	52.67	Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2	[more]

BLAST of Csor.00g013450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930895.1	3.92e-224	100.00	protein XRI1-like [Cucurbita moschata] >XP_023532484.1 protein XRI1-like [Cucurb...	[more]
KAG7036253.1	2.83e-221	97.73	Protein XRI1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022995967.1	3.09e-221	98.67	protein XRI1-like [Cucurbita maxima]	[more]
XP_004144384.1	4.90e-196	89.14	protein XRI1 [Cucumis sativus] >KGN58364.1 hypothetical protein Csa_001887 [Cucu...	[more]
XP_008461886.1	9.88e-196	89.47	PREDICTED: protein XRI1 isoform X2 [Cucumis melo]	[more]

BLAST of Csor.00g013450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EY26	1.90e-224	100.00	protein XRI1-like OS=Cucurbita moschata OX=3662 GN=LOC111437252 PE=4 SV=1	[more]
A0A6J1K0G1	1.50e-221	98.67	protein XRI1-like OS=Cucurbita maxima OX=3661 GN=LOC111491323 PE=4 SV=1	[more]
A0A0A0LBN6	2.37e-196	89.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G628730 PE=4 SV=1	[more]
A0A1S3CFL6	4.78e-196	89.47	protein XRI1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500376 PE=4 SV=1	[more]
A0A6J1E034	1.13e-194	88.16	protein XRI1 OS=Momordica charantia OX=3673 GN=LOC111026161 PE=4 SV=1	[more]

BLAST of Csor.00g013450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48720.2	3.1e-69	52.67	x-ray induced transcript 1	[more]
AT5G48720.1	2.4e-66	55.64	x-ray induced transcript 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..301
None	No IPR available	PANTHER	PTHR33385:SF4	PROTEIN XRI1	coord: 2..301
IPR039933	Protein XRI1	PANTHER	PTHR33385	PROTEIN XRI1	coord: 2..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g013450.m01	Csor.00g013450.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0007143	female meiotic nuclear division
biological_process	GO:0007140	male meiotic nuclear division
biological_process	GO:0009555	pollen development
biological_process	GO:0010165	response to X-ray
cellular_component	GO:0005634	nucleus