Csor.00g013290 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAACCGATCTGAACGTGGGAAGGATAATCCCTATGTTCAATTCTCTGCTGCCTCATCGTCATCTGCTCAACCTGGGAAGCGTTCGTCTTCTTTAACTCTAATCCCTTCCGTTCGCTCTGTGATGATTTAGGGTTTTGATTTGTTCTTTTGAAATTTTGGATTATGTTCAGGAGATAAGATGTGGGATACGTTAGGTCGCTGCGGGAAGATGTTGGAAGATTATGGAAAAATGGCAGGGGAGGCTGTGGGAAACGTCTGGCATCACAGTTAGTTTTTTTTCCTCGATCAAATTTTATTTTCAATCAAACTTTTGTTTTCAGTCAGAAAATTTGTTCCTTCATGCTGAAAATCTTAATATATTGTTCAATAATTTCCTTTGTATCTGCGTAGTTTCTCTTTTCTTCATCGAATTTGTTCCTTCATGCCTAAAATCCTCATATATTGTTCAATAATTTCCTTTGTATTTGCATAGGATTTATTTAAGCTTCCGATGAACTGATTCTCATAGTGAAACAGTTCCTGCTCGATCAGGTTTCTTTGAGTGAGCTTGGTGATACCCAAGTCATGTTGATGAACTTACATGTATGTGTCTAATAGGTCTAACGTTAAAAAGTATCTAATAACTTATTAAACGTTTATGTTTGTGTGTAATAGATTCCTGAATTTTAAGAACTATGTACATGGTTTTTAAACTTTCAATTTCGTGTTTAATAGGTCTTAAAACTTGTAACTTTGTGTCTAACTTTCAAATTTTGGCTACATATTCACCCTTATTTAAATTTTACAAACCTACTGTACATAAAATTAGATGTTTTTGTCTAATAGAACATTAAACTTTTGATTTCCTGTCGAACAGGTTTGTGAACTGTTGAATAAGCTAAGAACTAATTAGACACAAAATTGAAGGCGTAAGGATTTATTAGAAACTTTTTAAAGGAGTTTGACACAAATCGATAATATCACCATTTGGGTGGCATCTAATAGAGCTGAGAAAGAACATGTACGAATGAGTCGATTTTGTTTTGGGAGGGCCGCTAATGTTCTTTCTATATTGCTTGCTTCCTCGAGTGTTGATTCTTTCTTTTATTGCGCTTAGATGCATGCCAAGATGTATTAGCTCCTAATGTAAATATGTTTTGACAGTAAAAGTTAGTCCAAGCATTGCTGATGCTGCAAAGGCCCGGCTTGTCCAAGGGACAAAATTACTTGCCGAAGGAGGACCTGAAGGACTATTCCAGAGTACGTTTGGGGTTCTTCCTGGAGAGAAATACTTGCACTCCTATGCTTGCTATCTGTATGCCCCCTCTGGCCCTGTGAATGGGACTCTTTACATATCCACAAAAAGACTGGCTTTCTGTAGTGAATCCCCTGTCGGTAACTCTCCATCTCCTGGCCAGCCACAGAGTGCCTACTACAAGGTATGGTTGACCCATTTATTGGGGACGCTTTAGTTGTGATATAACTAAAAGTGAAGTATTTCTCAAATTTATATCAAAGTTTAGTTACTTTTACCTTTCGCATTTTCAGCATGGATTTGAGTGGATTACTATAAAGCTTCTTGCATAATAAGCATTAAAATGTGTTCTTGACTGTTCTCCTTTTTGACACGAGTACAATTGGGATATATGTCAAATTCTGGATAAAAACATGAAATCTACCGGCCTCAGATGTTAAGATGAATTTTAACCATATGAAATGTACTTGGACTACATGCGGGACAAATCCCATTGGAAATAGATGGTTCGGACAAGCCACCAATTGATAGTATGAGAGGCTGCCATGTGGGGTCTATAGATTCCATATTTACTCAAGGACCGAATAGCACGACTTAGTGACTAGGAGTGTAGGGAGAGCCTGTTGTGCCTTGTTTTTGTTTGACTGGCCTATCCTCTTTCGAGAAGCAAGCTCCCTCTGGTTGTCCAATCCTTGGATGGCTCTCGGTTTTTGAGCATGTTGGGAGATTAGGTGACAGTTTCAAGACTCGAAAGCTTGCCGAACAAGCAAATCAAGCCCTAACTAGTTTTTTTGAGTAAAGGGTTTTTTTCTTTACTAGTCAAATGGTAAGGTAGGGCGTATCTTAGGCCATTTTCCCCTTACAAAGATTTGAGGAACTAAGCCAGGAAGAACGGTTTTCCAATCTTCTTCTTAGGCCATTTTCCCCTTACAATGATTCTCGGTTTTCTACTGAAGTCAATGGTATGCCTAAACTATGGGATCACGAGTCCTAGTTGGTTAGAAGCTTGCCTGATATCACTTCCACAATACCTGGTTAAAGGTGATACAATAATCATATATCATCCAAGTAAAAGAAGATAGTACTGCTTTGAAGGAGTCTAGACTCGAAATTGGATTATTTTTTAGAAACCCTGACTTCTTGAAGTTGGCTTCAAATAGTTCTACCAGAAATTTCTTCATAGTTCTTACTGAGTTCATGGTTTAAAAGATAATTACTAAGAGCATGCAAAATCGAAAAAACAAAACTTAGCTGATAAATTGAAATGAAAATTTACCATAACAAAAGGCCTTCTGGATCTTGTTTAGCTACTCCAATTATGTTGCACAGATTAGAACTTGATTTGCATCTATTCCTCTTAGTTATCTGAACAATGTTGACTTGAATTAATTGGAATGTTGGCAGAATGAATCTTTAGCTTAGCTATGGGATTTTGTTAACACTCAACTATTTAGAGCCATCTCTCAAGCATATTTATCAATTTGTAGGTGGTGATAGATCTGAATCGCCTGGCAACAGCCCACCCTTCTCCAAATCTTCTCAACCCCTCAGAAAAAGACATTCACATAGTCACAAAGGATGGGTATGAGTTCTGGTTCGTAGGATTTTTATCGTTCAGCAGTGCTCTGAAGAGTTTAAACGAGGCACTAAAGCACTCCCATGCCCAGTTTGGATGA ATGAGCAACCGATCTGAACGTGGGAAGGATAATCCCTATGTTCAATTCTCTGCTGCCTCATCGTCATCTGCTCAACCTGGGAAGCGAGATAAGATGTGGGATACGTTAGGTCGCTGCGGGAAGATGTTGGAAGATTATGGAAAAATGGCAGGGGAGGCTGTGGGAAACGTCTGGCATCACATAAAAGTTAGTCCAAGCATTGCTGATGCTGCAAAGGCCCGGCTTGTCCAAGGGACAAAATTACTTGCCGAAGGAGGACCTGAAGGACTATTCCAGAGTACGTTTGGGGTTCTTCCTGGAGAGAAATACTTGCACTCCTATGCTTGCTATCTGTATGCCCCCTCTGGCCCTGTGAATGGGACTCTTTACATATCCACAAAAAGACTGGCTTTCTGTAGTGAATCCCCTGTCGGTAACTCTCCATCTCCTGGCCAGCCACAGAGTGCCTACTACAAGGTGGTGATAGATCTGAATCGCCTGGCAACAGCCCACCCTTCTCCAAATCTTCTCAACCCCTCAGAAAAAGACATTCACATAGTCACAAAGGATGGGTATGAGTTCTGGTTCGTAGGATTTTTATCGTTCAGCAGTGCTCTGAAGAGTTTAAACGAGGCACTAAAGCACTCCCATGCCCAGTTTGGATGA ATGAGCAACCGATCTGAACGTGGGAAGGATAATCCCTATGTTCAATTCTCTGCTGCCTCATCGTCATCTGCTCAACCTGGGAAGCGAGATAAGATGTGGGATACGTTAGGTCGCTGCGGGAAGATGTTGGAAGATTATGGAAAAATGGCAGGGGAGGCTGTGGGAAACGTCTGGCATCACATAAAAGTTAGTCCAAGCATTGCTGATGCTGCAAAGGCCCGGCTTGTCCAAGGGACAAAATTACTTGCCGAAGGAGGACCTGAAGGACTATTCCAGAGTACGTTTGGGGTTCTTCCTGGAGAGAAATACTTGCACTCCTATGCTTGCTATCTGTATGCCCCCTCTGGCCCTGTGAATGGGACTCTTTACATATCCACAAAAAGACTGGCTTTCTGTAGTGAATCCCCTGTCGGTAACTCTCCATCTCCTGGCCAGCCACAGAGTGCCTACTACAAGGTGGTGATAGATCTGAATCGCCTGGCAACAGCCCACCCTTCTCCAAATCTTCTCAACCCCTCAGAAAAAGACATTCACATAGTCACAAAGGATGGGTATGAGTTCTGGTTCGTAGGATTTTTATCGTTCAGCAGTGCTCTGAAGAGTTTAAACGAGGCACTAAAGCACTCCCATGCCCAGTTTGGATGA MSNRSERGKDNPYVQFSAASSSSAQPGKRDKMWDTLGRCGKMLEDYGKMAGEAVGNVWHHIKVSPSIADAAKARLVQGTKLLAEGGPEGLFQSTFGVLPGEKYLHSYACYLYAPSGPVNGTLYISTKRLAFCSESPVGNSPSPGQPQSAYYKVVIDLNRLATAHPSPNLLNPSEKDIHIVTKDGYEFWFVGFLSFSSALKSLNEALKHSHAQFG Homology
BLAST of Csor.00g013290 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 6.5e-50 Identity = 98/201 (48.76%), Postives = 139/201 (69.15%), Query Frame = 0
BLAST of Csor.00g013290 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 7.4e-46 Identity = 93/199 (46.73%), Postives = 130/199 (65.33%), Query Frame = 0
BLAST of Csor.00g013290 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 2.9e-42 Identity = 85/204 (41.67%), Postives = 130/204 (63.73%), Query Frame = 0
BLAST of Csor.00g013290 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2) HSP 1 Score: 135.6 bits (340), Expect = 6.7e-31 Identity = 74/204 (36.27%), Postives = 114/204 (55.88%), Query Frame = 0
BLAST of Csor.00g013290 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.7e-29 Identity = 66/191 (34.55%), Postives = 104/191 (54.45%), Query Frame = 0
BLAST of Csor.00g013290 vs. NCBI nr
Match: KAG6606299.1 (GEM-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 437 bits (1123), Expect = 1.24e-154 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of Csor.00g013290 vs. NCBI nr
Match: XP_023533770.1 (GEM-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 434 bits (1115), Expect = 2.05e-153 Identity = 212/214 (99.07%), Postives = 213/214 (99.53%), Query Frame = 0
BLAST of Csor.00g013290 vs. NCBI nr
Match: XP_022931233.1 (GEM-like protein 2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 431 bits (1108), Expect = 2.39e-152 Identity = 211/214 (98.60%), Postives = 212/214 (99.07%), Query Frame = 0
BLAST of Csor.00g013290 vs. NCBI nr
Match: XP_023533771.1 (GEM-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 425 bits (1092), Expect = 6.13e-150 Identity = 210/214 (98.13%), Postives = 211/214 (98.60%), Query Frame = 0
BLAST of Csor.00g013290 vs. NCBI nr
Match: XP_022931234.1 (GEM-like protein 2 isoform X2 [Cucurbita moschata]) HSP 1 Score: 422 bits (1085), Expect = 7.16e-149 Identity = 209/214 (97.66%), Postives = 210/214 (98.13%), Query Frame = 0
BLAST of Csor.00g013290 vs. ExPASy TrEMBL
Match: A0A6J1EXW0 (GEM-like protein 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437472 PE=3 SV=1) HSP 1 Score: 431 bits (1108), Expect = 1.16e-152 Identity = 211/214 (98.60%), Postives = 212/214 (99.07%), Query Frame = 0
BLAST of Csor.00g013290 vs. ExPASy TrEMBL
Match: A0A6J1ETR6 (GEM-like protein 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437472 PE=3 SV=1) HSP 1 Score: 422 bits (1085), Expect = 3.47e-149 Identity = 209/214 (97.66%), Postives = 210/214 (98.13%), Query Frame = 0
BLAST of Csor.00g013290 vs. ExPASy TrEMBL
Match: A0A6J1K9Z7 (GEM-like protein 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491446 PE=3 SV=1) HSP 1 Score: 414 bits (1064), Expect = 5.52e-146 Identity = 204/212 (96.23%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of Csor.00g013290 vs. ExPASy TrEMBL
Match: A0A6J1K7V6 (GEM-like protein 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491446 PE=3 SV=1) HSP 1 Score: 405 bits (1041), Expect = 1.65e-142 Identity = 202/212 (95.28%), Postives = 205/212 (96.70%), Query Frame = 0
BLAST of Csor.00g013290 vs. ExPASy TrEMBL
Match: A0A6J1HGG7 (GEM-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111463872 PE=3 SV=1) HSP 1 Score: 331 bits (849), Expect = 3.11e-113 Identity = 164/211 (77.73%), Postives = 176/211 (83.41%), Query Frame = 0
BLAST of Csor.00g013290 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 198.7 bits (504), Expect = 4.6e-51 Identity = 98/201 (48.76%), Postives = 139/201 (69.15%), Query Frame = 0
BLAST of Csor.00g013290 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein ) HSP 1 Score: 190.7 bits (483), Expect = 1.3e-48 Identity = 97/201 (48.26%), Postives = 137/201 (68.16%), Query Frame = 0
BLAST of Csor.00g013290 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 ) HSP 1 Score: 185.3 bits (469), Expect = 5.3e-47 Identity = 93/199 (46.73%), Postives = 130/199 (65.33%), Query Frame = 0
BLAST of Csor.00g013290 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein ) HSP 1 Score: 173.3 bits (438), Expect = 2.1e-43 Identity = 85/204 (41.67%), Postives = 130/204 (63.73%), Query Frame = 0
BLAST of Csor.00g013290 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein ) HSP 1 Score: 131.0 bits (328), Expect = 1.2e-30 Identity = 66/191 (34.55%), Postives = 104/191 (54.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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