Csor.00g012860 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g012860
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-type E3 ubiquitin transferase
Location	Csor_Chr02: 9548445 .. 9549503 (+)
RNA-Seq Expression	Csor.00g012860
Synteny	Csor.00g012860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATCTTATGGCACCCCAAAAACTTGGATACCATATATGAGCAACAAAGATTGCTCTCAAGGGTTCTGTAGTGTATATTGTCCTCAGTGGTGTTACATCATGTTTTCACCTCCACCACCTTTAGAGTTTCCAGATGATGATTCAGGCCCAAATTTTTCACCTCTTGTGATTGCAATTATTGGAATTCTGGCTAGTGCTTTTCTTCTTATAACCTATTACACCATCATTTCAAAGTATTATGGCAACACGAGCCGCTTGTCTAGGACTCAAGATCATGACCCAAATCAGGAGTTTGAAGATACTCACAACCCAACACTCCACGAGCCGTGGCATGTCGCCACTACTGGCTTGGATGAAGCATTGATCAAGTGCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGCCTCAGTGAGTTTCAAGAAGATGAGAACCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTGTGCCGTGCAAACATCGTCTCTGTCACTGCTTCTTCTCCACTTCAACTGCCTGCAACCACTGGAAACCCCACAACCAATGAGGCCATTCCAGAGACCTCTCAGGCAAATGACCATGAGGGTATTTCACAGGAACCTGGAAGAAGTTTTGGCAATGACAATGCTAAGAACTCAGTTCGCGCTTTCAGTGACCTTGGAAATTTGGTGAAAAGAGATACTGTCATTGAGCTTAGAGATGGAAGATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAACCATATCATTATCGCAGATGAGTTTGGAGGCATTGATGAAGCAGGAAGCTCAGGTGATGTTGGATCATCCAAACATTCAATGGGAGAAGACAGCAAGTCAAATCATAGAAAAAGAATCCTACATTGTGTGATGAGTCCTGTCTCAATGAAGAGATCATTCTCAAGTGGAAGATTTTCTCTCACGAAACATGGAAGAGAACACAGAGGACTTGCCCCTGTCTGA

mRNA sequence

ATGGGATCTTATGGCACCCCAAAAACTTGGATACCATATATGAGCAACAAAGATTGCTCTCAAGGGTTCTGTAGTGTATATTGTCCTCAGTGGTGTTACATCATGTTTTCACCTCCACCACCTTTAGAGTTTCCAGATGATGATTCAGGCCCAAATTTTTCACCTCTTGTGATTGCAATTATTGGAATTCTGGCTAGTGCTTTTCTTCTTATAACCTATTACACCATCATTTCAAAGTATTATGGCAACACGAGCCGCTTGTCTAGGACTCAAGATCATGACCCAAATCAGGAGTTTGAAGATACTCACAACCCAACACTCCACGAGCCGTGGCATGTCGCCACTACTGGCTTGGATGAAGCATTGATCAAGTGCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGCCTCAGTGAGTTTCAAGAAGATGAGAACCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTGTGCCGTGCAAACATCGTCTCTGTCACTGCTTCTTCTCCACTTCAACTGCCTGCAACCACTGGAAACCCCACAACCAATGAGGCCATTCCAGAGACCTCTCAGGCAAATGACCATGAGGGTATTTCACAGGAACCTGGAAGAAGTTTTGGCAATGACAATGCTAAGAACTCAGTTCGCGCTTTCAGTGACCTTGGAAATTTGGTGAAAAGAGATACTGTCATTGAGCTTAGAGATGGAAGATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAACCATATCATTATCGCAGATGAGTTTGGAGGCATTGATGAAGCAGGAAGCTCAGGTGATGTTGGATCATCCAAACATTCAATGGGAGAAGACAGCAAGTCAAATCATAGAAAAAGAATCCTACATTGTGTGATGAGTCCTGTCTCAATGAAGAGATCATTCTCAAGTGGAAGATTTTCTCTCACGAAACATGGAAGAGAACACAGAGGACTTGCCCCTGTCTGA

Coding sequence (CDS)

ATGGGATCTTATGGCACCCCAAAAACTTGGATACCATATATGAGCAACAAAGATTGCTCTCAAGGGTTCTGTAGTGTATATTGTCCTCAGTGGTGTTACATCATGTTTTCACCTCCACCACCTTTAGAGTTTCCAGATGATGATTCAGGCCCAAATTTTTCACCTCTTGTGATTGCAATTATTGGAATTCTGGCTAGTGCTTTTCTTCTTATAACCTATTACACCATCATTTCAAAGTATTATGGCAACACGAGCCGCTTGTCTAGGACTCAAGATCATGACCCAAATCAGGAGTTTGAAGATACTCACAACCCAACACTCCACGAGCCGTGGCATGTCGCCACTACTGGCTTGGATGAAGCATTGATCAAGTGCATTACGGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGCCTCAGTGAGTTTCAAGAAGATGAGAACCTTAGGTTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGTATTGATACTTGGCTCAAATCACACTCCAATTGCCCGTTGTGCCGTGCAAACATCGTCTCTGTCACTGCTTCTTCTCCACTTCAACTGCCTGCAACCACTGGAAACCCCACAACCAATGAGGCCATTCCAGAGACCTCTCAGGCAAATGACCATGAGGGTATTTCACAGGAACCTGGAAGAAGTTTTGGCAATGACAATGCTAAGAACTCAGTTCGCGCTTTCAGTGACCTTGGAAATTTGGTGAAAAGAGATACTGTCATTGAGCTTAGAGATGGAAGATTGCAGCAAATTAGAAGGTCCATTTCAATGGATCATTGCAGCCAAAACCATATCATTATCGCAGATGAGTTTGGAGGCATTGATGAAGCAGGAAGCTCAGGTGATGTTGGATCATCCAAACATTCAATGGGAGAAGACAGCAAGTCAAATCATAGAAAAAGAATCCTACATTGTGTGATGAGTCCTGTCTCAATGAAGAGATCATTCTCAAGTGGAAGATTTTCTCTCACGAAACATGGAAGAGAACACAGAGGACTTGCCCCTGTCTGA

Protein sequence

MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV

Homology

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BLAST of Csor.00g012860 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-62
Identity = 161/372 (43.28%), Postives = 203/372 (54.57%), Query Frame = 0


Query: 10  WIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEF----PDDDSGPNFSPLVIAIIGILA 69
           W+PY   +DCSQG CS+YCPQWCY +F PPPP +      DD SGP FSPLVIAIIG+LA
Sbjct: 8   WVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLA 67

Query: 70  SAFLLITYYTIISKYYGNTSRL--------SRTQDHDPNQEFEDTH---NPTLHEPWHVA 129
           SAFLL++YYT ISKY G  S L        S    +         H       HE W+V+
Sbjct: 68  SAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVS 127

Query: 130 -TTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDT 189
             +GLDE LI  ITVCKY+RGDG V  +DCSVCL EF + E+LRLLP+CSHAFH QCIDT
Sbjct: 128 PPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDT 187

Query: 190 WLKSHSNCPLCRANIVSVTA--SSPLQ---LPATTGNPTTNEAIPETSQANDHEGISQEP 249
           WLKSHSNCPLCRANI  VT   +SP      P  TG   T+E +      +  E + +E 
Sbjct: 188 WLKSHSNCPLCRANITFVTVGLASPEPEGCAPGETGGDNTHEVV---VVMDGLENLCEEQ 247

Query: 250 GRSFGNDNAKNSVRAFSDLG-NLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIA--- 309
             +    +  +      D+   + + +   E+R+      R + S D    N + IA   
Sbjct: 248 QEAVSRASTADDDHDAKDVAEGMEEANGAAEIREEGSPPKRGASSFDLHRDNRMCIADVL 307

Query: 310 -----DEFGGIDEAG-SSGDVGSSKHSMGEDSKS----NHRKRILHCVMSPVSMKRSFSS 345
                DE     E+G  +G  G+S+   GE+SK     + R   L   M  +  KR  S 
Sbjct: 308 QESMEDELTAARESGLLAGGAGTSRRCHGENSKGRGGRSRRALQLQDAMEALPGKRLPSG 367

[Close]

BLAST of Csor.00g012860 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.1e-59
Identity = 161/375 (42.93%), Postives = 214/375 (57.07%), Query Frame = 0


Query: 7   PKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDD---SGPNFSPLVIAIIGI 66
           P  W PY S  DCSQG C++YCPQWCY++F PPPP  F DDD   S  +FSPL+IA+IGI
Sbjct: 5   PNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGI 64

Query: 67  LASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATT--GLDEA 126
           L SA +L++YYT+ISKY     + S ++  + N   E   + T      ++T   GL+E+
Sbjct: 65  LTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSST----QRISTNGDGLNES 124

Query: 127 LIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSNC 186
           +IK ITV KYK GDG V+GSDCSVCLSEF+E+E+LRLLPKC+HAFHL CIDTWLKSHSNC
Sbjct: 125 MIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNC 184

Query: 187 PLCRANIVSV---TASSPLQLPATTGNPTTNE----AIPE--------TSQANDHEGISQ 246
           PLCRA +  V   TAS    +     N + +     ++ E         SQ  D + +  
Sbjct: 185 PLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVV 244

Query: 247 EPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADE 306
                 G+ N+     A S+L    +R    E +D     IRRS+S++  S   + IAD 
Sbjct: 245 IEDLEIGSRNSD----ARSELQLPEERR---ETKDEDSLPIRRSVSLN--SGVVVSIADV 304

Query: 307 FGGI-DEAGSSGDVGSS-KHSMGED--------SKSNHRKRILHCVMSPVS--MKRSFSS 348
              I DE G SG VG+S +   GED        +++N R          VS    RS S+
Sbjct: 305 LREIEDEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRS-------GGVSGFFVRSLST 359

[Close]

BLAST of Csor.00g012860 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-58
Identity = 146/328 (44.51%), Postives = 194/328 (59.15%), Query Frame = 0


Query: 1   MGSYGTPKTW-IPYMSNKDCSQGFCSVYCPQWCYIMFSPPPP--LEFPDDDSGPNFSPLV 60
           MGS G P  W   Y S +DCSQG CSVYCPQWCY++F PPP   L+  DD S  +FSPL+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 61  IAIIGILASAFLLITYYTIISKY----YGNTSRLSRTQDHDPNQEF--EDTHNPTLHEPW 120
           IA+IGILASAF+L++YYT+ISKY      N+S  S    +  + ++  + T+N   +   
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 121 HVATT-------GLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSH 180
           +   T       GLDE+LIK ITV KY++ DG VE SDCSVCLSEFQE+E+LRLLPKC+H
Sbjct: 121 NPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNH 180

Query: 181 AFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGI 240
           AFH+ CIDTWLKSHSNCPLCRA IV+ +A   + L        TN+ I           +
Sbjct: 181 AFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDL--------TNQQI-----------V 240

Query: 241 SQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVI---------ELRDGRLQQIRRSISMDH 300
           ++    S G+D+    V    DL N   R+  +         E++D R  + RRS S+ +
Sbjct: 241 TENNSISTGDDSV---VVVNLDLENSRSRNETVNEGSTPKPPEMQDSRDGEERRSASL-N 300

Query: 301 CSQNHIIIADEFGGIDEAGSSGDVGSSK 304
                + IAD    I++   S  VG+S+
Sbjct: 301 SGGGVVSIADILREIEDDEESAGVGTSR 305

[Close]

BLAST of Csor.00g012860 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 192.6 bits (488), Expect = 7.6e-48
Identity = 134/364 (36.81%), Postives = 184/364 (50.55%), Query Frame = 0


Query: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWC-YIMFSPPPPL--EFPDDD--SGPNFSP 60
           M S   P  W  Y++ +DC+QG CS +CPQWC YI FSPPP    +F +D   S PN SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNP---TLHEPWH 120
           LVIAI GI A+AFLL  YYT++SKY  N +      +   +    D ++P      +P+ 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 121 V--ATTGLDEALIKCITVCKYKRGDG--LVEGSDCSVCLSEFQEDENLRLLPKCSHAFHL 180
           +  +T GLD+ LIK I   K K+      + G+DCS+CL EF EDE+LRLLPKC+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 181 QCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEP 240
            CID WLKSHSNCPLCRA I+                      +P T Q   H  +    
Sbjct: 181 VCIDRWLKSHSNCPLCRAKII----------------------VPTTQQPEHHVVV---- 240

Query: 241 GRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDH---CSQNHIIIAD 300
                     N  R  S++G+  + + V+   D   +++  SIS  H    S   I++  
Sbjct: 241 ---------MNLDRFTSNVGS-AEGNVVV---DDHREEVSVSISSHHPSWFSAADIVLRI 300

Query: 301 EFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGRE 350
              G +E G+             D ++ +R+++       V +KRSFSSG   L   GR 
Sbjct: 301 SRDGEEEEGN------------YDLENGNREKL-------VDLKRSFSSGGLVLGTQGRT 306

[Close]

BLAST of Csor.00g012860 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 5.1e-36
Identity = 95/254 (37.40%), Postives = 137/254 (53.94%), Query Frame = 0


Query: 18  DCSQGFCSVYCPQWC-----YIMFSPPPP------------------LEFPDDDSGPNFS 77
           DCS G C   CP  C     Y   SP  P                  +  P  DS  +  
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 81

Query: 78  PL-VIAIIGILASAFLLITYYTIISKYYGNT-------SRLSRTQDHDP--NQEFEDTHN 137
            + +I I G + +  +L+T + +++K++ ++       +  S  +D+D    +EF+D   
Sbjct: 82  AISIITITGAVLA--ILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQ 141

Query: 138 PTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSH 197
              H  W + TTGL +++I  IT+C YKRGDGL+E +DC VCL+EF+EDE+LRLLPKC+H
Sbjct: 142 VD-HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNH 201

Query: 198 AFHLQCIDTWLKSHSNCPLCRANI--VSVTA---SSPLQL-PATTGNPTTNEAIPETSQA 233
           AFH+ CIDTWL SH+NCPLCRA I  +SVT    S P+++ P  +G+   N+ + E    
Sbjct: 202 AFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLENDGVDE---- 261

[Close]

BLAST of Csor.00g012860 vs. NCBI nr
Match: KAG6606257.1 (E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036198.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 719 bits (1857), Expect = 6.87e-262
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 60
           MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI
Sbjct: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 60

Query: 61  IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE 120
           IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE
Sbjct: 61  IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE 120

Query: 121 ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSN 180
           ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSN
Sbjct: 121 ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSN 180

Query: 181 CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS 240
           CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS
Sbjct: 181 CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS 240

Query: 241 VRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG 300
           VRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG
Sbjct: 241 VRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG 300

Query: 301 SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352
           SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV
Sbjct: 301 SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352

[Close]

BLAST of Csor.00g012860 vs. NCBI nr
Match: XP_022931173.1 (E3 ubiquitin-protein ligase Os04g0590900-like [Cucurbita moschata])

HSP 1 Score: 717 bits (1852), Expect = 3.97e-261
Identity = 351/352 (99.72%), Postives = 351/352 (99.72%), Query Frame = 0


Query: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 60
           MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI
Sbjct: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 60

Query: 61  IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE 120
           IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE
Sbjct: 61  IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE 120

Query: 121 ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSN 180
           ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSN
Sbjct: 121 ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSN 180

Query: 181 CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS 240
           CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS
Sbjct: 181 CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS 240

Query: 241 VRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG 300
           VRAFSDLGNLVKRDT IELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG
Sbjct: 241 VRAFSDLGNLVKRDTFIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG 300

Query: 301 SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352
           SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV
Sbjct: 301 SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352

[Close]

BLAST of Csor.00g012860 vs. NCBI nr
Match: XP_022996182.1 (E3 ubiquitin-protein ligase Os04g0590900-like [Cucurbita maxima])

HSP 1 Score: 716 bits (1847), Expect = 2.30e-260
Identity = 350/352 (99.43%), Postives = 351/352 (99.72%), Query Frame = 0


Query: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 60
           MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI
Sbjct: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 60

Query: 61  IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE 120
           IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE
Sbjct: 61  IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE 120

Query: 121 ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSN 180
           ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE+LRLLPKCSHAFHLQCIDTWLKSHSN
Sbjct: 121 ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSN 180

Query: 181 CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS 240
           CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS
Sbjct: 181 CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS 240

Query: 241 VRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG 300
           VRAFSDLGNLVKRD VIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG
Sbjct: 241 VRAFSDLGNLVKRDAVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG 300

Query: 301 SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352
           SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV
Sbjct: 301 SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352

[Close]

BLAST of Csor.00g012860 vs. NCBI nr
Match: XP_023533677.1 (E3 ubiquitin-protein ligase Os04g0590900-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 713 bits (1840), Expect = 2.68e-259
Identity = 348/352 (98.86%), Postives = 351/352 (99.72%), Query Frame = 0


Query: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 60
           MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI
Sbjct: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 60

Query: 61  IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE 120
           IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE
Sbjct: 61  IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE 120

Query: 121 ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSN 180
           ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE+LRLLPKCSHAFHLQCIDTWLKSHSN
Sbjct: 121 ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSN 180

Query: 181 CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS 240
           CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQAN+HE +SQEPGRSFGNDNAKNS
Sbjct: 181 CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANNHEAVSQEPGRSFGNDNAKNS 240

Query: 241 VRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG 300
           VRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG
Sbjct: 241 VRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG 300

Query: 301 SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352
           SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV
Sbjct: 301 SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352

[Close]

BLAST of Csor.00g012860 vs. NCBI nr
Match: KAA0038569.1 (E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK31174.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa])

HSP 1 Score: 626 bits (1615), Expect = 1.19e-224
Identity = 304/358 (84.92%), Postives = 330/358 (92.18%), Query Frame = 0


Query: 2   GSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAII 61
           GSYG PKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDD+SGPNFSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVIAII 63

Query: 62  GILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDEA 121
           GILASA LL+TYYTIISKY GNT+RLS T ++DP++E+ED HNPTLHEPWHVATTGLDEA
Sbjct: 64  GILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGLDEA 123

Query: 122 LIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           LIK ITVCKYKRGDGLVEGSDCSVCLSEFQEDE+LRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNSV 241
           PLCRANI+S+ A SP+QLPA+T  P TNE +PE+SQ NDHE +S + G+SF N++AKNSV
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAKNSV 243

Query: 242 RAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIAD-------EFGGIDEAG 301
           RAFSDLGNL KRDT+IELRDGRLQQIRRSISMDHCSQN +IIAD       EFGGIDEAG
Sbjct: 244 RAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGIDEAG 303

Query: 302 SSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352
           SSGDVGSSKHS+GEDS+S+HRKRILHCVMSPVSMKRSFSSGR SLTKHGREHRG+APV
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 361

[Close]

BLAST of Csor.00g012860 vs. ExPASy TrEMBL
Match: A0A6J1EXP0 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111437432 PE=3 SV=1)

HSP 1 Score: 717 bits (1852), Expect = 1.92e-261
Identity = 351/352 (99.72%), Postives = 351/352 (99.72%), Query Frame = 0


Query: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 60
           MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI
Sbjct: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 60

Query: 61  IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE 120
           IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE
Sbjct: 61  IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE 120

Query: 121 ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSN 180
           ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSN
Sbjct: 121 ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSN 180

Query: 181 CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS 240
           CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS
Sbjct: 181 CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS 240

Query: 241 VRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG 300
           VRAFSDLGNLVKRDT IELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG
Sbjct: 241 VRAFSDLGNLVKRDTFIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG 300

Query: 301 SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352
           SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV
Sbjct: 301 SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352

[Close]

BLAST of Csor.00g012860 vs. ExPASy TrEMBL
Match: A0A6J1K181 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111491489 PE=3 SV=1)

HSP 1 Score: 716 bits (1847), Expect = 1.11e-260
Identity = 350/352 (99.43%), Postives = 351/352 (99.72%), Query Frame = 0


Query: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 60
           MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI
Sbjct: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAI 60

Query: 61  IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE 120
           IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE
Sbjct: 61  IGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDE 120

Query: 121 ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSN 180
           ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDE+LRLLPKCSHAFHLQCIDTWLKSHSN
Sbjct: 121 ALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSN 180

Query: 181 CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS 240
           CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS
Sbjct: 181 CPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNS 240

Query: 241 VRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG 300
           VRAFSDLGNLVKRD VIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG
Sbjct: 241 VRAFSDLGNLVKRDAVIELRDGRLQQIRRSISMDHCSQNHIIIADEFGGIDEAGSSGDVG 300

Query: 301 SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352
           SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV
Sbjct: 301 SSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352

[Close]

BLAST of Csor.00g012860 vs. ExPASy TrEMBL
Match: A0A5D3E5F1 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004560 PE=3 SV=1)

HSP 1 Score: 626 bits (1615), Expect = 5.76e-225
Identity = 304/358 (84.92%), Postives = 330/358 (92.18%), Query Frame = 0


Query: 2   GSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAII 61
           GSYG PKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDD+SGPNFSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVIAII 63

Query: 62  GILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDEA 121
           GILASA LL+TYYTIISKY GNT+RLS T ++DP++E+ED HNPTLHEPWHVATTGLDEA
Sbjct: 64  GILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGLDEA 123

Query: 122 LIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           LIK ITVCKYKRGDGLVEGSDCSVCLSEFQEDE+LRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNSV 241
           PLCRANI+S+ A SP+QLPA+T  P TNE +PE+SQ NDHE +S + G+SF N++AKNSV
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAKNSV 243

Query: 242 RAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIAD-------EFGGIDEAG 301
           RAFSDLGNL KRDT+IELRDGRLQQIRRSISMDHCSQN +IIAD       EFGGIDEAG
Sbjct: 244 RAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGIDEAG 303

Query: 302 SSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352
           SSGDVGSSKHS+GEDS+S+HRKRILHCVMSPVSMKRSFSSGR SLTKHGREHRG+APV
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 361

[Close]

BLAST of Csor.00g012860 vs. ExPASy TrEMBL
Match: A0A1S4E5H2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103503554 PE=3 SV=1)

HSP 1 Score: 625 bits (1612), Expect = 1.65e-224
Identity = 304/358 (84.92%), Postives = 329/358 (91.90%), Query Frame = 0


Query: 2   GSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAII 61
           GSYG PKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDD+SGPNFSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVIAII 63

Query: 62  GILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDEA 121
           GILASA LL+TYYTIISKY GNT+RLS T ++DP++E+ED HNPTLHEPWHVATTGLDEA
Sbjct: 64  GILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGLDEA 123

Query: 122 LIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           LIK ITVCKYKRGDGLVEGSDCSVCLSEFQEDE+LRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNSV 241
           PLCRANI+S+ A SP+QLPA+T  P TNE +PE+SQ NDHE +S + G+SF N++AKNSV
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAKNSV 243

Query: 242 RAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIAD-------EFGGIDEAG 301
           RAFSDLGNL KRDT IELRDGRLQQIRRSISMDHCSQN +IIAD       EFGGIDEAG
Sbjct: 244 RAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGIDEAG 303

Query: 302 SSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352
           SSGDVGSSKHS+GEDS+S+HRKRILHCVMSPVSMKRSFSSGR SLTKHGREHRG+APV
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 361

[Close]

BLAST of Csor.00g012860 vs. ExPASy TrEMBL
Match: A0A0A0LH71 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G901190 PE=3 SV=1)

HSP 1 Score: 618 bits (1593), Expect = 1.25e-221
Identity = 302/358 (84.36%), Postives = 328/358 (91.62%), Query Frame = 0


Query: 2   GSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAII 61
           GSYG PKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPD+ SGP+FSPLVIAII
Sbjct: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDN-SGPHFSPLVIAII 63

Query: 62  GILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDEA 121
           GILASAFLL+TYYTIISKY GNT+RLS T +HDP++E+ED HNPT HEPWHVATTGLDEA
Sbjct: 64  GILASAFLLVTYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPTFHEPWHVATTGLDEA 123

Query: 122 LIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSNC 181
           LIK ITVCKYKR DGLVEGSDCSVCLSEFQEDE+LRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 124 LIKSITVCKYKREDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183

Query: 182 PLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNSV 241
           PLCRANI+S+ A SP+QLPA+T  P TNE +PETSQ ND+E +S + G+SF N++ KNSV
Sbjct: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPETSQDNDYEAVSLDSGQSFSNEDGKNSV 243

Query: 242 RAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIAD-------EFGGIDEAG 301
           RAFSDLGNL KRDT+IELRDGRLQQIRRSISMDHCSQNHIIIAD       +FGGIDEAG
Sbjct: 244 RAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNHIIIADVLRLNEDDFGGIDEAG 303

Query: 302 SSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352
           SSGDVGSSKHS+GEDS+S+HRKRILHCVMSPVSMKRSFSSGR SLTKHGREHRG+APV
Sbjct: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 360

[Close]

BLAST of Csor.00g012860 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 231.9 bits (590), Expect = 8.0e-61
Identity = 161/375 (42.93%), Postives = 214/375 (57.07%), Query Frame = 0


Query: 7   PKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDD---SGPNFSPLVIAIIGI 66
           P  W PY S  DCSQG C++YCPQWCY++F PPPP  F DDD   S  +FSPL+IA+IGI
Sbjct: 5   PNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGI 64

Query: 67  LASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATT--GLDEA 126
           L SA +L++YYT+ISKY     + S ++  + N   E   + T      ++T   GL+E+
Sbjct: 65  LTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSST----QRISTNGDGLNES 124

Query: 127 LIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSNC 186
           +IK ITV KYK GDG V+GSDCSVCLSEF+E+E+LRLLPKC+HAFHL CIDTWLKSHSNC
Sbjct: 125 MIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNC 184

Query: 187 PLCRANIVSV---TASSPLQLPATTGNPTTNE----AIPE--------TSQANDHEGISQ 246
           PLCRA +  V   TAS    +     N + +     ++ E         SQ  D + +  
Sbjct: 185 PLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVV 244

Query: 247 EPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDHCSQNHIIIADE 306
                 G+ N+     A S+L    +R    E +D     IRRS+S++  S   + IAD 
Sbjct: 245 IEDLEIGSRNSD----ARSELQLPEERR---ETKDEDSLPIRRSVSLN--SGVVVSIADV 304

Query: 307 FGGI-DEAGSSGDVGSS-KHSMGED--------SKSNHRKRILHCVMSPVS--MKRSFSS 348
              I DE G SG VG+S +   GED        +++N R          VS    RS S+
Sbjct: 305 LREIEDEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRS-------GGVSGFFVRSLST 359

[Close]

BLAST of Csor.00g012860 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-59
Identity = 146/328 (44.51%), Postives = 194/328 (59.15%), Query Frame = 0


Query: 1   MGSYGTPKTW-IPYMSNKDCSQGFCSVYCPQWCYIMFSPPPP--LEFPDDDSGPNFSPLV 60
           MGS G P  W   Y S +DCSQG CSVYCPQWCY++F PPP   L+  DD S  +FSPL+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 61  IAIIGILASAFLLITYYTIISKY----YGNTSRLSRTQDHDPNQEF--EDTHNPTLHEPW 120
           IA+IGILASAF+L++YYT+ISKY      N+S  S    +  + ++  + T+N   +   
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 121 HVATT-------GLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSH 180
           +   T       GLDE+LIK ITV KY++ DG VE SDCSVCLSEFQE+E+LRLLPKC+H
Sbjct: 121 NPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNH 180

Query: 181 AFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGI 240
           AFH+ CIDTWLKSHSNCPLCRA IV+ +A   + L        TN+ I           +
Sbjct: 181 AFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDL--------TNQQI-----------V 240

Query: 241 SQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVI---------ELRDGRLQQIRRSISMDH 300
           ++    S G+D+    V    DL N   R+  +         E++D R  + RRS S+ +
Sbjct: 241 TENNSISTGDDSV---VVVNLDLENSRSRNETVNEGSTPKPPEMQDSRDGEERRSASL-N 300

Query: 301 CSQNHIIIADEFGGIDEAGSSGDVGSSK 304
                + IAD    I++   S  VG+S+
Sbjct: 301 SGGGVVSIADILREIEDDEESAGVGTSR 305

[Close]

BLAST of Csor.00g012860 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 192.6 bits (488), Expect = 5.4e-49
Identity = 134/364 (36.81%), Postives = 184/364 (50.55%), Query Frame = 0


Query: 1   MGSYGTPKTWIPYMSNKDCSQGFCSVYCPQWC-YIMFSPPPPL--EFPDDD--SGPNFSP 60
           M S   P  W  Y++ +DC+QG CS +CPQWC YI FSPPP    +F +D   S PN SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LVIAIIGILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNP---TLHEPWH 120
           LVIAI GI A+AFLL  YYT++SKY  N +      +   +    D ++P      +P+ 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFA 120

Query: 121 V--ATTGLDEALIKCITVCKYKRGDG--LVEGSDCSVCLSEFQEDENLRLLPKCSHAFHL 180
           +  +T GLD+ LIK I   K K+      + G+DCS+CL EF EDE+LRLLPKC+H FH+
Sbjct: 121 LESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHV 180

Query: 181 QCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEP 240
            CID WLKSHSNCPLCRA I+                      +P T Q   H  +    
Sbjct: 181 VCIDRWLKSHSNCPLCRAKII----------------------VPTTQQPEHHVVV---- 240

Query: 241 GRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQIRRSISMDH---CSQNHIIIAD 300
                     N  R  S++G+  + + V+   D   +++  SIS  H    S   I++  
Sbjct: 241 ---------MNLDRFTSNVGS-AEGNVVV---DDHREEVSVSISSHHPSWFSAADIVLRI 300

Query: 301 EFGGIDEAGSSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGRE 350
              G +E G+             D ++ +R+++       V +KRSFSSG   L   GR 
Sbjct: 301 SRDGEEEEGN------------YDLENGNREKL-------VDLKRSFSSGGLVLGTQGRT 306

[Close]

BLAST of Csor.00g012860 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 3.6e-37
Identity = 95/254 (37.40%), Postives = 137/254 (53.94%), Query Frame = 0


Query: 18  DCSQGFCSVYCPQWC-----YIMFSPPPP------------------LEFPDDDSGPNFS 77
           DCS G C   CP  C     Y   SP  P                  +  P  DS  +  
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 81

Query: 78  PL-VIAIIGILASAFLLITYYTIISKYYGNT-------SRLSRTQDHDP--NQEFEDTHN 137
            + +I I G + +  +L+T + +++K++ ++       +  S  +D+D    +EF+D   
Sbjct: 82  AISIITITGAVLA--ILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQ 141

Query: 138 PTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDENLRLLPKCSH 197
              H  W + TTGL +++I  IT+C YKRGDGL+E +DC VCL+EF+EDE+LRLLPKC+H
Sbjct: 142 VD-HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNH 201

Query: 198 AFHLQCIDTWLKSHSNCPLCRANI--VSVTA---SSPLQL-PATTGNPTTNEAIPETSQA 233
           AFH+ CIDTWL SH+NCPLCRA I  +SVT    S P+++ P  +G+   N+ + E    
Sbjct: 202 AFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLENDGVDE---- 261

[Close]

BLAST of Csor.00g012860 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 1.7e-34
Identity = 92/247 (37.25%), Postives = 130/247 (52.63%), Query Frame = 0


Query: 30  QWCYIMFSPPPPLEFPDDDSG---PNFSPLVIAIIGILASAFLLITYYTIISKYYGNTSR 89
           ++C+  + PPPP   P  +     P    +V +II  L   F L  + T   +    +  
Sbjct: 19  RFCFRQYPPPPPPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRRISAASVT 78

Query: 90  LSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDEALIKCITVCKYKRGDGLVEGSDCSVC 149
              T   +   E E+      H  W + T GL  + I  ITV  +K+G+G+++G++CSVC
Sbjct: 79  PGDTNQQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVC 138

Query: 150 LSEFQEDENLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIVSVTASSPLQLPATTGNP 209
           L+EF+EDE+LRLLPKCSHAFHL CIDTWL SH NCPLCRA ++ +T       P      
Sbjct: 139 LNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITE------PPHQETE 198

Query: 210 TTNEAIPETSQANDHEGISQEPGRSFGNDNAKNSVRAFSDLGNLVKRDTVIELRDGRLQQ 269
           T ++  P++  +ND  G  Q+  RS  N N     RA SDL N            GR++ 
Sbjct: 199 TNHQ--PDSESSNDLRG-RQDSSRSRRNHNI-FLPRAQSDLANY--------CGSGRVEN 247

Query: 270 IRRSISM 274
           +RRS S+
Sbjct: 259 VRRSFSI 247

The following BLAST results are available for this feature:

BLAST of Csor.00g012860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XLY8	1.1e-62	43.28	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9LF64	1.1e-59	42.93	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	1.6e-58	44.51	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
P0C041	7.6e-48	36.81	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
Q8LFY8	5.1e-36	37.40	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]

BLAST of Csor.00g012860 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606257.1	6.87e-262	100.00	E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia] >KA...	[more]
XP_022931173.1	3.97e-261	99.72	E3 ubiquitin-protein ligase Os04g0590900-like [Cucurbita moschata]	[more]
XP_022996182.1	2.30e-260	99.43	E3 ubiquitin-protein ligase Os04g0590900-like [Cucurbita maxima]	[more]
XP_023533677.1	2.68e-259	98.86	E3 ubiquitin-protein ligase Os04g0590900-like [Cucurbita pepo subsp. pepo]	[more]
KAA0038569.1	1.19e-224	84.92	E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK31174.1 E3 ubiquitin-...	[more]

BLAST of Csor.00g012860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXP0	1.92e-261	99.72	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111437432...	[more]
A0A6J1K181	1.11e-260	99.43	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111491489 P...	[more]
A0A5D3E5F1	5.76e-225	84.92	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S4E5H2	1.65e-224	84.92	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103503554 PE=3 ...	[more]
A0A0A0LH71	1.25e-221	84.36	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G901190 PE...	[more]

BLAST of Csor.00g012860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17600.1	8.0e-61	42.93	RING/U-box superfamily protein	[more]
AT3G03550.1	1.2e-59	44.51	RING/U-box superfamily protein	[more]
AT4G17905.1	5.4e-49	36.81	RING/U-box superfamily protein	[more]
AT1G72220.1	3.6e-37	37.40	RING/U-box superfamily protein	[more]
AT5G10380.1	1.7e-34	37.25	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 143..184 e-value: 9.0E-8 score: 41.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 142..185 e-value: 1.1E-13 score: 51.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 143..185 score: 13.020386
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 118..193 e-value: 5.6E-21 score: 75.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..314
None	No IPR available	PANTHER	PTHR45676:SF108	E3 UBIQUITIN-PROTEIN LIGASE OS04G0590900-LIKE	coord: 265..344
None	No IPR available	PANTHER	PTHR45676:SF108	E3 UBIQUITIN-PROTEIN LIGASE OS04G0590900-LIKE	coord: 6..225
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 142..185 e-value: 2.21977E-17 score: 73.1049
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 137..192
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 6..225 coord: 265..344

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g012860.m01	Csor.00g012860.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane