Csor.00g012830 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g012830
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	PLATZ transcription factor family protein
Location	Csor_Chr02: 9541804 .. 9542882 (+)
RNA-Seq Expression	Csor.00g012830
Synteny	Csor.00g012830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATAATTTCTCTGGGTTTTTTTAATTCTTTGTGTTTTGAGTTATGGGCATTCTGTTTTCTAGTGTTTTTCTCAATTCTGGGTTTGTTTGTGTTTCAATGGTGGATTTTGATTTGGGGTTTGTTTGTTTGTTTTGTGGAACAGGGCGCTGGAGGACCTGAGGATGAAGATAATAGATGGCCGCCATGGCTGAAACCTCTGCTTCGAGAAAGATTCTTTGTTCAATGCAAGTTCCATGCCGATTCCCACAAGAGTGAATGTAATATGTACTGTTTGGATTGCATGAATGGCGCCTTATGTTCTCTCTGTCTCGCTTATCACAAAGACCATCGCGCTATTCAGGTTCGATTTATTTCTCTTTTATTTTTGGTAATTTTTCATTTCAAGGGAAAAACTCGTGGGGGATTTTCCCTTTCATCACTGGTTTCATCAAATGCACTATTTCTAAATCAAATTCTCGCACAAACCCATTACTAACCGTTCGAAATCACTGACAGGGTTGCTCTGTTTTTTCCATTCTGATTCTATTTGCCACAGATTAGAAGGTCCTCATACCACGATGTGATAAGGGTATCGGAGATTCAGAAAGTCCTCGACATTACCGGCGTCCAAACCTACATTATTAACAGCGCCAGAGTCGTATTCTTGAATGAACGCCCTCAGCCTAGGCCCGGCAAAGGCGTCACCAACACCTGTGAAGTCTGCGAACGCAGCCTCCTCGATTCTTTCCGATTCTGCTCTCTTGGCTGCAAGGTAACTCCACCTAAAATTTCTCATCAATGCCATTCATGAGTTCTTCAATAAATTGAATTGTGGGGATTTTCTGTGCTGTTTTAGATTGTGGGAACATCGAAGAATTTCGAGAAGAAACCGCGAGTGATGGGGGGGTCGGATTCCGAGGATTCGTGTTACAGCAGTAGCAGCCAAGGAAGAGCGATGAACAAAAACAAGAACAAAGTGGTGCAGAGCTTCACGCCGTCAACGCCACCCCCAACTTTGGTCAGTTACAGAACGGCGAAACGACGAAAAGGGATTCCACATAGAGCTCCAATGAGTGGACTCATGATCGAATATTGA

mRNA sequence

ATGGGCGCTGGAGGACCTGAGGATGAAGATAATAGATGGCCGCCATGGCTGAAACCTCTGCTTCGAGAAAGATTCTTTGTTCAATGCAAGTTCCATGCCGATTCCCACAAGAGTGAATGTAATATGTACTGTTTGGATTGCATGAATGGCGCCTTATGTTCTCTCTGTCTCGCTTATCACAAAGACCATCGCGCTATTCAGATTAGAAGGTCCTCATACCACGATGTGATAAGGGTATCGGAGATTCAGAAAGTCCTCGACATTACCGGCGTCCAAACCTACATTATTAACAGCGCCAGAGTCGTATTCTTGAATGAACGCCCTCAGCCTAGGCCCGGCAAAGGCGTCACCAACACCTGTGAAGTCTGCGAACGCAGCCTCCTCGATTCTTTCCGATTCTGCTCTCTTGGCTGCAAGATTGTGGGAACATCGAAGAATTTCGAGAAGAAACCGCGAGTGATGGGGGGGTCGGATTCCGAGGATTCGTGTTACAGCAGTAGCAGCCAAGGAAGAGCGATGAACAAAAACAAGAACAAAGTGGTGCAGAGCTTCACGCCGTCAACGCCACCCCCAACTTTGGTCAGTTACAGAACGGCGAAACGACGAAAAGGGATTCCACATAGAGCTCCAATGAGTGGACTCATGATCGAATATTGA

Coding sequence (CDS)

ATGGGCGCTGGAGGACCTGAGGATGAAGATAATAGATGGCCGCCATGGCTGAAACCTCTGCTTCGAGAAAGATTCTTTGTTCAATGCAAGTTCCATGCCGATTCCCACAAGAGTGAATGTAATATGTACTGTTTGGATTGCATGAATGGCGCCTTATGTTCTCTCTGTCTCGCTTATCACAAAGACCATCGCGCTATTCAGATTAGAAGGTCCTCATACCACGATGTGATAAGGGTATCGGAGATTCAGAAAGTCCTCGACATTACCGGCGTCCAAACCTACATTATTAACAGCGCCAGAGTCGTATTCTTGAATGAACGCCCTCAGCCTAGGCCCGGCAAAGGCGTCACCAACACCTGTGAAGTCTGCGAACGCAGCCTCCTCGATTCTTTCCGATTCTGCTCTCTTGGCTGCAAGATTGTGGGAACATCGAAGAATTTCGAGAAGAAACCGCGAGTGATGGGGGGGTCGGATTCCGAGGATTCGTGTTACAGCAGTAGCAGCCAAGGAAGAGCGATGAACAAAAACAAGAACAAAGTGGTGCAGAGCTTCACGCCGTCAACGCCACCCCCAACTTTGGTCAGTTACAGAACGGCGAAACGACGAAAAGGGATTCCACATAGAGCTCCAATGAGTGGACTCATGATCGAATATTGA

Protein sequence

MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY

Homology

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BLAST of Csor.00g012830 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.7e-32
Identity = 63/134 (47.01%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 14  PPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSY 73
           P WL  L  E+FFV C +H  + K+E N+ CLDC   +LC  C+  H+ HR +Q+RR  Y
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCT-SLCPHCVPSHRFHRLLQVRRYVY 65

Query: 74  HDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRF 133
           HDV+R+ ++QK++D + VQ Y INSA+VVF+ +RPQ R  KG  N C  C+RSL + +  
Sbjct: 66  HDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEPYIH 125

Query: 134 CSLGCKIVGTSKNF 148
           CSLGCK+    K +
Sbjct: 126 CSLGCKVDFVMKRY 138

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BLAST of Csor.00g012830 vs. NCBI nr
Match: XP_022930997.1 (uncharacterized protein LOC111437323 [Cucurbita moschata] >KAG6606254.1 hypothetical protein SDJN03_03571, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036196.1 hypothetical protein SDJN02_02997 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 454 bits (1168), Expect = 2.31e-161
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH
Sbjct: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKV 180
           EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKV
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKV 180

Query: 181 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218
           VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY
Sbjct: 181 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218

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BLAST of Csor.00g012830 vs. NCBI nr
Match: XP_023532351.1 (uncharacterized protein LOC111794550 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451 bits (1159), Expect = 5.44e-160
Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH
Sbjct: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKV 180
           EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKV
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKV 180

Query: 181 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218
           VQSFTPSTPP TLVSYRTAKRRKGIPHRAPMSGLMIEY
Sbjct: 181 VQSFTPSTPPRTLVSYRTAKRRKGIPHRAPMSGLMIEY 218

[Close]

BLAST of Csor.00g012830 vs. NCBI nr
Match: XP_022995236.1 (uncharacterized protein LOC111490843 [Cucurbita maxima])

HSP 1 Score: 448 bits (1152), Expect = 6.36e-159
Identity = 215/218 (98.62%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH
Sbjct: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKV 180
           EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVM GSDSEDSCYSSSSQGR MNKNKNKV
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMVGSDSEDSCYSSSSQGRVMNKNKNKV 180

Query: 181 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218
           VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLM+EY
Sbjct: 181 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMMEY 218

[Close]

BLAST of Csor.00g012830 vs. NCBI nr
Match: XP_038888735.1 (uncharacterized protein LOC120078532 [Benincasa hispida])

HSP 1 Score: 414 bits (1063), Expect = 2.54e-145
Identity = 206/221 (93.21%), Postives = 209/221 (94.57%), Query Frame = 0


Query: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MG G PEDEDNRWPPWLKPLLRE FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+H
Sbjct: 1   MGVGCPEDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSS--QGRAM-NKNK 180
           EVCERSLLDSFRFCSLGCKIVGTSKNFEKK RVMG SDSEDS YSSSS  QGR M N NK
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKRRVMG-SDSEDSSYSSSSSSQGRIMKNNNK 180

Query: 181 NKVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218
           N+VVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPM GL+IEY
Sbjct: 181 NRVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 220

[Close]

BLAST of Csor.00g012830 vs. NCBI nr
Match: XP_004136189.1 (uncharacterized protein LOC101209912 [Cucumis sativus] >XP_008465982.1 PREDICTED: uncharacterized protein LOC103503550 [Cucumis melo] >KAE8651437.1 hypothetical protein Csa_000726 [Cucumis sativus] >TYK31172.1 putative zinc-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 408 bits (1049), Expect = 3.46e-143
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 3   AGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKD 62
           AG P DEDNRWPPWLKPLLRE FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+HKD
Sbjct: 4   AGSPVDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKD 63

Query: 63  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 122
           HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV
Sbjct: 64  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 123

Query: 123 CERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSS-SSQGRAM-NKNKNKV 182
           CERSLLDSFRFCSLGCKIVGTSKN+EKK RVMG SDSEDS YSS SSQGR M N NKN+V
Sbjct: 124 CERSLLDSFRFCSLGCKIVGTSKNYEKKRRVMG-SDSEDSSYSSNSSQGRIMKNSNKNRV 183

Query: 183 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218
           VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPM GL+IEY
Sbjct: 184 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 220

[Close]

BLAST of Csor.00g012830 vs. ExPASy TrEMBL
Match: A0A6J1ES91 (uncharacterized protein LOC111437323 OS=Cucurbita moschata OX=3662 GN=LOC111437323 PE=4 SV=1)

HSP 1 Score: 454 bits (1168), Expect = 1.12e-161
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH
Sbjct: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKV 180
           EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKV
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKV 180

Query: 181 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218
           VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY
Sbjct: 181 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218

[Close]

BLAST of Csor.00g012830 vs. ExPASy TrEMBL
Match: A0A6J1K1F4 (uncharacterized protein LOC111490843 OS=Cucurbita maxima OX=3661 GN=LOC111490843 PE=4 SV=1)

HSP 1 Score: 448 bits (1152), Expect = 3.08e-159
Identity = 215/218 (98.62%), Postives = 216/218 (99.08%), Query Frame = 0


Query: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH
Sbjct: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKV 180
           EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVM GSDSEDSCYSSSSQGR MNKNKNKV
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMVGSDSEDSCYSSSSQGRVMNKNKNKV 180

Query: 181 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218
           VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLM+EY
Sbjct: 181 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMMEY 218

[Close]

BLAST of Csor.00g012830 vs. ExPASy TrEMBL
Match: A0A5D3E5J1 (Putative zinc-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004540 PE=4 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 1.68e-143
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 3   AGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKD 62
           AG P DEDNRWPPWLKPLLRE FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+HKD
Sbjct: 4   AGSPVDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKD 63

Query: 63  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 122
           HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV
Sbjct: 64  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 123

Query: 123 CERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSS-SSQGRAM-NKNKNKV 182
           CERSLLDSFRFCSLGCKIVGTSKN+EKK RVMG SDSEDS YSS SSQGR M N NKN+V
Sbjct: 124 CERSLLDSFRFCSLGCKIVGTSKNYEKKRRVMG-SDSEDSSYSSNSSQGRIMKNSNKNRV 183

Query: 183 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218
           VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPM GL+IEY
Sbjct: 184 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 220

[Close]

BLAST of Csor.00g012830 vs. ExPASy TrEMBL
Match: A0A1S3CQ58 (uncharacterized protein LOC103503550 OS=Cucumis melo OX=3656 GN=LOC103503550 PE=4 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 1.68e-143
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 3   AGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKD 62
           AG P DEDNRWPPWLKPLLRE FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+HKD
Sbjct: 4   AGSPVDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKD 63

Query: 63  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 122
           HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV
Sbjct: 64  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 123

Query: 123 CERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSS-SSQGRAM-NKNKNKV 182
           CERSLLDSFRFCSLGCKIVGTSKN+EKK RVMG SDSEDS YSS SSQGR M N NKN+V
Sbjct: 124 CERSLLDSFRFCSLGCKIVGTSKNYEKKRRVMG-SDSEDSSYSSNSSQGRIMKNSNKNRV 183

Query: 183 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218
           VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPM GL+IEY
Sbjct: 184 VQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 220

[Close]

BLAST of Csor.00g012830 vs. ExPASy TrEMBL
Match: A0A6J1DZX6 (uncharacterized protein LOC111026143 OS=Momordica charantia OX=3673 GN=LOC111026143 PE=4 SV=1)

HSP 1 Score: 407 bits (1047), Expect = 2.10e-142
Identity = 200/215 (93.02%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 5   GPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHR 64
           GP++ED+RWPPWLKPLLRE FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHR
Sbjct: 58  GPDEEDHRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHR 117

Query: 65  AIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE 124
           AIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE
Sbjct: 118 AIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCE 177

Query: 125 RSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKN-KNKVVQS 184
           RSLLDSFRFCSLGCKIVGTSKNF KK R M GSDSEDS YSSSSQG++MNKN KNKVVQS
Sbjct: 178 RSLLDSFRFCSLGCKIVGTSKNFVKKRR-MTGSDSEDSSYSSSSQGKSMNKNNKNKVVQS 237

Query: 185 FTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218
           FTPSTPPPTLV+YRTAKRRKGIPHRAPM GL+IEY
Sbjct: 238 FTPSTPPPTLVNYRTAKRRKGIPHRAPMGGLIIEY 271

[Close]

BLAST of Csor.00g012830 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 318.9 bits (816), Expect = 3.1e-87
Identity = 161/215 (74.88%), Postives = 180/215 (83.72%), Query Frame = 0


Query: 5   GPEDEDNR-WPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDH 64
           G E+E N+ +P WLKPLLRE+FFVQCK HADSHKSECNMYCLDC NG LCSLCL++HKDH
Sbjct: 2   GAEEETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDH 61

Query: 65  RAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC 124
            AIQIRRSSYHDVIRVSEIQK LDITGVQTY+INSA+VVFLNERPQPRPGKGV NTCEVC
Sbjct: 62  HAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVC 121

Query: 125 ERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKVVQS 184
            RSL+DSFRFCSLGCKI G SK  ++K      SDS+DS YSS+S GR + KN + +  S
Sbjct: 122 YRSLVDSFRFCSLGCKISGISKK-KRKEWTNNLSDSDDS-YSSTSIGR-LKKNDDIMNNS 181

Query: 185 FTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 219
           FTPSTPP + V+ R AKRRKGIPHRAP  GL+IEY
Sbjct: 182 FTPSTPPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 213

[Close]

BLAST of Csor.00g012830 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 311.2 bits (796), Expect = 6.5e-85
Identity = 155/213 (72.77%), Postives = 173/213 (81.22%), Query Frame = 0


Query: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAGGPE+E+NRWPPWLKPLL+E+FFV CKFH DSHKSECNMYCLDC NG LCSLCLA+H
Sbjct: 21  MGAGGPEEEENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHH 80

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHR IQIRRSSYHDVIRV+EIQK LDI G+QTY+INSA+VVFLNERPQPRPGKGVTNTC
Sbjct: 81  KDHRTIQIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTC 140

Query: 121 EVCERSLL-DSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNK 180
           +VC RSL+ DSFRFCSLGCKI GTS+ FEK      G ++       SS   A+ KN   
Sbjct: 141 KVCYRSLVDDSFRFCSLGCKIAGTSRGFEK------GRENLLMETEDSSSSIAIGKNITN 200

Query: 181 VVQSFTPSTPPPTLVS-YRTAKRRKGIPHRAPM 212
            +QSF+PSTPP T  S  R  KRRKGIPHR+PM
Sbjct: 201 -LQSFSPSTPPLTTSSNCRIVKRRKGIPHRSPM 226

[Close]

BLAST of Csor.00g012830 vs. TAIR 10
Match: AT1G32700.2 (PLATZ transcription factor family protein )

HSP 1 Score: 255.4 bits (651), Expect = 4.2e-68
Identity = 132/177 (74.58%), Postives = 147/177 (83.05%), Query Frame = 0


Query: 42  MYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARV 101
           MYCLDC NG LCSLCL++HKDH AIQIRRSSYHDVIRVSEIQK LDITGVQTY+INSA+V
Sbjct: 1   MYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKV 60

Query: 102 VFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSED 161
           VFLNERPQPRPGKGV NTCEVC RSL+DSFRFCSLGCKI G SK  ++K      SDS+D
Sbjct: 61  VFLNERPQPRPGKGVINTCEVCYRSLVDSFRFCSLGCKISGISKK-KRKEWTNNLSDSDD 120

Query: 162 SCYSSSSQGRAMNKNKNKVVQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 219
           S YSS+S GR + KN + +  SFTPSTPP + V+ R AKRRKGIPHRAP  GL+IEY
Sbjct: 121 S-YSSTSIGR-LKKNDDIMNNSFTPSTPPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 174

[Close]

BLAST of Csor.00g012830 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 233.8 bits (595), Expect = 1.3e-61
Identity = 122/239 (51.05%), Postives = 155/239 (64.85%), Query Frame = 0


Query: 7   EDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAI 66
           E+ED   PPWL P+LR  +FV C  H DS+K+ECN++CLDC   A CS CL  HKDHR +
Sbjct: 9   EEEDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVV 68

Query: 67  QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 126
           QIRRSSYH+V+RV+EIQK +DI  VQTYIINSA++VFLNERPQPR GKGVTNTCE+C RS
Sbjct: 69  QIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRS 128

Query: 127 LLDSFRFCSLGCKIVG-----TSKNFEKKPR----VMGGSDSEDS-----CYSSSSQGRA 186
           LLDSFRFCSLGCK+ G      S  F  K +     +GGS+S+++        +++  R 
Sbjct: 129 LLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRL 188

Query: 187 MNKNKNKVVQ---------------------SFTPSTPPPTLVSYRTAKRRKGIPHRAP 211
           M+      V+                     SF+P TPP  + ++R + RRKG+PHRAP
Sbjct: 189 MSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPP--IYNHRNSSRRKGVPHRAP 245

[Close]

BLAST of Csor.00g012830 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein )

HSP 1 Score: 233.8 bits (595), Expect = 1.3e-61
Identity = 122/239 (51.05%), Postives = 155/239 (64.85%), Query Frame = 0


Query: 7   EDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAI 66
           E+ED   PPWL P+LR  +FV C  H DS+K+ECN++CLDC   A CS CL  HKDHR +
Sbjct: 6   EEEDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVV 65

Query: 67  QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 126
           QIRRSSYH+V+RV+EIQK +DI  VQTYIINSA++VFLNERPQPR GKGVTNTCE+C RS
Sbjct: 66  QIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRS 125

Query: 127 LLDSFRFCSLGCKIVG-----TSKNFEKKPR----VMGGSDSEDS-----CYSSSSQGRA 186
           LLDSFRFCSLGCK+ G      S  F  K +     +GGS+S+++        +++  R 
Sbjct: 126 LLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRL 185

Query: 187 MNKNKNKVVQ---------------------SFTPSTPPPTLVSYRTAKRRKGIPHRAP 211
           M+      V+                     SF+P TPP  + ++R + RRKG+PHRAP
Sbjct: 186 MSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPP--IYNHRNSSRRKGVPHRAP 242

The following BLAST results are available for this feature:

BLAST of Csor.00g012830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	4.7e-32	47.01	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Csor.00g012830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930997.1	2.31e-161	100.00	uncharacterized protein LOC111437323 [Cucurbita moschata] >KAG6606254.1 hypothet...	[more]
XP_023532351.1	5.44e-160	99.54	uncharacterized protein LOC111794550 [Cucurbita pepo subsp. pepo]	[more]
XP_022995236.1	6.36e-159	98.62	uncharacterized protein LOC111490843 [Cucurbita maxima]	[more]
XP_038888735.1	2.54e-145	93.21	uncharacterized protein LOC120078532 [Benincasa hispida]	[more]
XP_004136189.1	3.46e-143	93.12	uncharacterized protein LOC101209912 [Cucumis sativus] >XP_008465982.1 PREDICTED...	[more]

BLAST of Csor.00g012830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ES91	1.12e-161	100.00	uncharacterized protein LOC111437323 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1K1F4	3.08e-159	98.62	uncharacterized protein LOC111490843 OS=Cucurbita maxima OX=3661 GN=LOC111490843...	[more]
A0A5D3E5J1	1.68e-143	93.12	Putative zinc-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CQ58	1.68e-143	93.12	uncharacterized protein LOC103503550 OS=Cucumis melo OX=3656 GN=LOC103503550 PE=...	[more]
A0A6J1DZX6	2.10e-142	93.02	uncharacterized protein LOC111026143 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]

BLAST of Csor.00g012830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32700.1	3.1e-87	74.88	PLATZ transcription factor family protein	[more]
AT4G17900.1	6.5e-85	72.77	PLATZ transcription factor family protein	[more]
AT1G32700.2	4.2e-68	74.58	PLATZ transcription factor family protein	[more]
AT1G21000.1	1.3e-61	51.05	PLATZ transcription factor family protein	[more]
AT1G21000.2	1.3e-61	51.05	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 69..140 e-value: 3.8E-30 score: 104.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..175
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 1..214
None	No IPR available	PANTHER	PTHR31065:SF64	SUBFAMILY NOT NAMED	coord: 1..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g012830.m01	Csor.00g012830.m01	mRNA