Csor.00g012020 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g012020
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr02: 4636579 .. 4637167 (-)
RNA-Seq ExpressionCsor.00g012020
SyntenyCsor.00g012020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAACTGGTACTGAACTTTTATGTACATTTTAGAAATGATTCTATTTTCCAAAAGAATCAAACTCATTTCCTCTTGCTTTCTCTTATTCAGGTGTTCTGTACACAATAGGTGGGAAGTTTCATACGCAGTTGACTTGCCTGTTGAAGAGCATGGCAGTAAAATTTCGTCACATCCGGTATGTTTTTCTAGCAGCAGAGATATTAATAATTCAGTATGGTAGGTTTTTCATTGTCTTGTTGGGATAATCCAATTAGTCGTATAAATTGAAATAATGGCTAATGAAATAATTCCATTGAAAAGTACTGATTGAAGTCTCAGTACAAAGCTTATAATACCAATGATTGGCTTTATTTTAGTTTCTATCAACATATACAATAGTATGGTTTGGATTTAACCCAATAACAGTTTGATTGAAATAAACTGAACTGTGAGCTTCTGCTGAGAAATTGCAATATGACAGCCATTATTCAGATCTTCATGTGAACCCAGAAGAATCTGATAATTCGGCTGCAGATCTCATGCAGCAAGATGTTATTGTCTTGGTGAACAACTTGCAACTTTTGGTACTAATGAACTTAAAATGA

mRNA sequence

ATGATGAACTGGTGTTCTGTACACAATAGGTGGGAAGTTTCATACGCAGTTGACTTGCCTGTTGAAGAGCATGGCAGTAAAATTTCGTCACATCCGGTATGTTTTTCTAGCAGCAGAGATATTAATAATTCAGTATGCCATTATTCAGATCTTCATGTGAACCCAGAAGAATCTGATAATTCGGCTGCAGATCTCATGCAGCAAGATGTTATTGTCTTGGTGAACAACTTGCAACTTTTGGTACTAATGAACTTAAAATGA

Coding sequence (CDS)

ATGATGAACTGGTGTTCTGTACACAATAGGTGGGAAGTTTCATACGCAGTTGACTTGCCTGTTGAAGAGCATGGCAGTAAAATTTCGTCACATCCGGTATGTTTTTCTAGCAGCAGAGATATTAATAATTCAGTATGCCATTATTCAGATCTTCATGTGAACCCAGAAGAATCTGATAATTCGGCTGCAGATCTCATGCAGCAAGATGTTATTGTCTTGGTGAACAACTTGCAACTTTTGGTACTAATGAACTTAAAATGA

Protein sequence

MMNWCSVHNRWEVSYAVDLPVEEHGSKISSHPVCFSSSRDINNSVCHYSDLHVNPEESDNSAADLMQQDVIVLVNNLQLLVLMNLK
Homology
[Close]
BLAST of Csor.00g012020 vs. NCBI nr
Match: KAG6605409.1 (hypothetical protein SDJN03_02726, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174 bits (441), Expect = 8.71e-55
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MMNWCSVHNRWEVSYAVDLPVEEHGSKISSHPVCFSSSRDINNSVCHYSDLHVNPEESDN 60
          MMNWCSVHNRWEVSYAVDLPVEEHGSKISSHPVCFSSSRDINNSVCHYSDLHVNPEESDN
Sbjct: 1  MMNWCSVHNRWEVSYAVDLPVEEHGSKISSHPVCFSSSRDINNSVCHYSDLHVNPEESDN 60

Query: 61 SAADLMQQDVIVLVNNLQLLVLMNLK 86
          SAADLMQQDVIVLVNNLQLLVLMNLK
Sbjct: 61 SAADLMQQDVIVLVNNLQLLVLMNLK 86

[Close]
BLAST of Csor.00g012020 vs. NCBI nr
Match: KAG7035360.1 (hypothetical protein SDJN02_02155, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 64.7 bits (156), Expect = 1.74e-11
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0 

Query: 5  CSVHNRWEVSYAVDLPVEEHGSKISSHP 32
          CSVHNRWEVSYAVDLPVEEHGSKISSHP
Sbjct: 48 CSVHNRWEVSYAVDLPVEEHGSKISSHP 75

The following BLAST results are available for this feature:
BLAST of Csor.00g012020 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g012020 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6605409.18.71e-55100.00hypothetical protein SDJN03_02726, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7035360.11.74e-11100.00hypothetical protein SDJN02_02155, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g012020 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g012020 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g012020.m01Csor.00g012020.m01mRNA