Csor.00g011980 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAAACGGCGTCATTCATTTTGTGTACTTTCCTCCTCTTAGGAACACTAACTCTGATCCAGGTGATTATTCTCATTTTCTCTGAAACCTCTTTTTGTAATTGGATCCTCAATTTGGCGATAGGTTTTTCTACAAGGTAAAGAAGCGCTTATCTCGCCTTTTAGATCTGTTATCAAGTGCGATTCCAGTCAGTGGTTCAAGAATTGAGGTTTTAGATATTGACGTTCTATGTTTTCTTAGTTCTTTTGGATCAGAATGGGAGTGAGGTTTATAAAGCTGATAACAGAAAATTAATTTATGAATTTGTATGAATTCAGTTAGTGTTCCCGAGATTTTAGGTCATTTTGTTTTGTGTTCTTTTAAGTCGTTTAGATCATAATGGGAATGATGTTTATAAATTGAAAGCCAAAAATTAATTTATGAAATTTTTGTTCCAGGCCAAGAAGTCGAAGGAGAATCTGAAAGAAGTGACTCATAAAGTTTACTTCGATGTTGAAATTGACGGCAAGGCTGCTGGTATGGTCGATTTTGTTTTGTTTTAAATAAATAGATCCAACTAAATTTGCATTCAATGATCGATCCCCGTTCTCATGCTTTATCGATTTAGCTTTCTTACTTAAACATCGCTCAACTTCAATCCTCTTGTTTATCTGTATAATAAGCGTGCCCTGGTGGCACAGAGCAATGCCCTAACAGACTTGCATGCTTAATGCACCAATGGGTAGTAGTTTAGTGTGACTTAATGCTTAGACATTGTTTCATGAATTGTATGTTGTGTAATGTTCAACTGTTTGTCGAGATTGGCTGTACTTGAGATATTAGATGTTCTACCATGGGATACATGTGACCTGAATTATATTTGTCGCATAATTAAGTGAAGGACAGTATAAAGCACATTATTGCTTGAGGTCAATTATATGATGCTTAATTATCTTGTTGAGACTCGGTGTATTTGACACGTTAAAATTGCTTGCTACTGAAGAATGCGTGTTTCATGAATGATATTTGTCGCATTATTGTAAAGGGAAGTTTGACGCCCACGTCCATTTCGGCGAAGGCAATTGTAAACGGATACTTCATACTTTTAAGAGCTTAACTAAACACATTTTGTGGCGGTTGTTTAACTAAGAGTATTCTTAATATGACAATTTGGATTATAACTGTCTTTCAGGTCGTATTGAGATGGGTCTTTTCGGGAAGGCTGTTCCTAAAACCGCTGGTATGTTTATTTATTTTGTATTTAAGACCATCAATTTTTGCTGGATTAGATACACTGCATACTATATGATAGTAATATTTTATAATAATACTGACCTTTTCTCGTGTGAATATGCAGAAAATTTCCGAGCATTGTGCACTGGTAAGCAGATAACTCTGATTTTAATCATATTTTTGAGTATTTTCATCTTCGTGAGGTGTTTCTTACATCTATAATCAAATTAGGGAGGCCTTAACTTCCTATTTAAACCGAGTTACTGATGTCAAAGTAACGTGAGGATTTCAAAGTGATTAATTGAGAGCCAATAGGCAAAAGCTTACTGTTTAATATTAACTATCTTTACAGCATGCGATGGCTACTCAGACCTTTTTCTAATATTTGGGTCTCTAATTCTGCATGATTTCAATTTTCAGGTGAGAAGGGTGTTGGGCACAGCGGAAAACCCCTGCACTACAAGGGTAGTGCGTTCCACAGGATCATTCCCAGCTTCATGATTCAAGGAGGTGACTTTACCCTCGGCGATGGAAGAGGTGGAGAATCAATCTACGGAGAGAAGTTCGCGGACGAGAATTTCAAGCTGAAGCATACAGGGCCAGGTGAAGGATAAAATCTCTACCCGTCCGTTACGGCATTCTAAAAATGATCCGAAATTGAAAATACAATATATATATAATGTATGCTGCAGGGCTTCTGTCTATGGCAAACGCTGGTCCAGACACAAATGGCTCACAATTCTTCATCACTACAGTCACAACTAGCTGGTAAATTCCTGTCTGCCACGAGTTTGTTTCATGCTTGATTTGATTGATTACTAAAAGGAAGCTGCTTATGCTTTTGTTTATACACACAGGTTGGATGGTAGACACGTTGTATTTGGAAAGGTGCTGTCTGGGATGGACGTGGTTTATAAAATAGAAGCCGAGGGAAGGCAGAACGGAACCCCTAAGAGCAAAGTTGTGATTGCCGACAGCGGTGAGCTCCCTCTATGATTGACATCTGGTCTTTGTTTTATATATCTCAGCATAGCATATCCCCCAATATCCAACCCTCACTCACTGTGCTTTTCTTTCTTGTACTGTTTACGGTAGAATTGGTGCACATGTCACGGATCTCTTAATTAATGTTTTATGTTCCCAATTTACCATCTTTTATAGCCATTCTCGTTAACCCCTCATCCTGGCATTTGTCAACCATAGTTAATGAATTTACCTTTTCATTTGGCTTTTAAAGTTAAACTTCTACATTTATTTATCAGCATATTAGTTGCTATAAAAAATAGAAATTTAGTCAGATTATACATATAGGTAAATGATTATTTACCTACCTAACACAAGACTGTAAAATGCTTTGGATGATAAGATCCCACACCCACATCGGCTAATTTAAGAAATGATGGCAAGTTTATAGATAAAAAATACTCTCTCCATTGGTATGAGTCTTTTTTGGAGGCCCAAAGCAAAGCCATGGGCGTCCAGGTTCAAAGTGCACAATATTATACTATGGAGAGTGTCAATATTATACTATGGAGAGTGTGTTCATCAAATAAAATGAACAAATTAAGTTAAAACCAACGTCATGACTTGTCCTCAAGAGGATCCATTATTTTTGCACAACCAAACAGACACGATACACACTGTCAAAGTCAAACTTTTCAAAAGTCTCGAACACAGTATTACTTTTCAAGGCTAAGGAAAAACAGAATTACTGAGAATCGCCTCGCCGCCTTAGTTTCCACCGTCTGCCTTTACTCGTGAATTCCTCTGCCTCCGTTGTTTTCACCGGACTTCGACTCCGTAACACAACGCTTCTGCTGAATTGTAGTGAGGAAACTGGCAGACAAATCAGAGTAA ATGGCGAAAACGGCGTCATTCATTTTGTGTACTTTCCTCCTCTTAGGAACACTAACTCTGATCCAGGCCAAGAAGTCGAAGGAGAATCTGAAAGAAGTGACTCATAAAGTTTACTTCGATGTTGAAATTGACGGCAAGGCTGCTGGTCGTATTGAGATGGGTCTTTTCGGGAAGGCTGTTCCTAAAACCGCTGAAAATTTCCGAGCATTGTGCACTGGTGAGAAGGGTGTTGGGCACAGCGGAAAACCCCTGCACTACAAGGGTAGTGCGTTCCACAGGATCATTCCCAGCTTCATGATTCAAGGAGGTGACTTTACCCTCGGCGATGGAAGAGGTGGAGAATCAATCTACGGAGAGAAGTTCGCGGACGAGAATTTCAAGCTGAAGCATACAGGGCCAGGGCTTCTGTCTATGGCAAACGCTGGTCCAGACACAAATGGCTCACAATTCTTCATCACTACAGTCACAACTAGCTGGTTGGATGGTAGACACGTTGTATTTGGAAAGGTGCTGTCTGGGATGGACGTGGTTTATAAAATAGAAGCCGAGGGAAGGCAGAACGGAACCCCTAAGAGCAAAGTTGTGATTGCCGACAGCGTGAGGAAACTGGCAGACAAATCAGAGTAA ATGGCGAAAACGGCGTCATTCATTTTGTGTACTTTCCTCCTCTTAGGAACACTAACTCTGATCCAGGCCAAGAAGTCGAAGGAGAATCTGAAAGAAGTGACTCATAAAGTTTACTTCGATGTTGAAATTGACGGCAAGGCTGCTGGTCGTATTGAGATGGGTCTTTTCGGGAAGGCTGTTCCTAAAACCGCTGAAAATTTCCGAGCATTGTGCACTGGTGAGAAGGGTGTTGGGCACAGCGGAAAACCCCTGCACTACAAGGGTAGTGCGTTCCACAGGATCATTCCCAGCTTCATGATTCAAGGAGGTGACTTTACCCTCGGCGATGGAAGAGGTGGAGAATCAATCTACGGAGAGAAGTTCGCGGACGAGAATTTCAAGCTGAAGCATACAGGGCCAGGGCTTCTGTCTATGGCAAACGCTGGTCCAGACACAAATGGCTCACAATTCTTCATCACTACAGTCACAACTAGCTGGTTGGATGGTAGACACGTTGTATTTGGAAAGGTGCTGTCTGGGATGGACGTGGTTTATAAAATAGAAGCCGAGGGAAGGCAGAACGGAACCCCTAAGAGCAAAGTTGTGATTGCCGACAGCGTGAGGAAACTGGCAGACAAATCAGAGTAA MAKTASFILCTFLLLGTLTLIQAKKSKENLKEVTHKVYFDVEIDGKAAGRIEMGLFGKAVPKTAENFRALCTGEKGVGHSGKPLHYKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGEKFADENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKIEAEGRQNGTPKSKVVIADSVRKLADKSE Homology
BLAST of Csor.00g011980 vs. ExPASy Swiss-Prot
Match: Q9SP02 (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana OX=3702 GN=CYP20-1 PE=1 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 8.4e-95 Identity = 167/199 (83.92%), Postives = 182/199 (91.46%), Query Frame = 0
BLAST of Csor.00g011980 vs. ExPASy Swiss-Prot
Match: Q8LDP4 (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana OX=3702 GN=CYP19-4 PE=1 SV=2) HSP 1 Score: 335.9 bits (860), Expect = 3.3e-91 Identity = 165/199 (82.91%), Postives = 179/199 (89.95%), Query Frame = 0
BLAST of Csor.00g011980 vs. ExPASy Swiss-Prot
Match: Q8L8W5 (Peptidyl-prolyl cis-trans isomerase CYP21-2 OS=Arabidopsis thaliana OX=3702 GN=CYP21-2 PE=2 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 1.2e-77 Identity = 134/169 (79.29%), Postives = 154/169 (91.12%), Query Frame = 0
BLAST of Csor.00g011980 vs. ExPASy Swiss-Prot
Match: Q9TW32 (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum OX=44689 GN=cypB PE=1 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 2.5e-70 Identity = 127/187 (67.91%), Postives = 153/187 (81.82%), Query Frame = 0
BLAST of Csor.00g011980 vs. ExPASy Swiss-Prot
Match: P52015 (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans OX=6239 GN=cyn-7 PE=1 SV=2) HSP 1 Score: 259.6 bits (662), Expect = 3.0e-68 Identity = 119/163 (73.01%), Postives = 138/163 (84.66%), Query Frame = 0
BLAST of Csor.00g011980 vs. NCBI nr
Match: KAG6605413.1 (Peptidyl-prolyl cis-trans isomerase CYP19-4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 417 bits (1071), Expect = 6.62e-147 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Csor.00g011980 vs. NCBI nr
Match: XP_023007282.1 (peptidyl-prolyl cis-trans isomerase CYP20-1 [Cucurbita maxima] >XP_023532306.1 peptidyl-prolyl cis-trans isomerase CYP20-1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 401 bits (1030), Expect = 1.02e-140 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Csor.00g011980 vs. NCBI nr
Match: XP_022948226.1 (peptidyl-prolyl cis-trans isomerase CYP20-1 [Cucurbita moschata]) HSP 1 Score: 399 bits (1026), Expect = 4.17e-140 Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Csor.00g011980 vs. NCBI nr
Match: XP_038900337.1 (peptidyl-prolyl cis-trans isomerase CYP20-1 [Benincasa hispida]) HSP 1 Score: 398 bits (1022), Expect = 1.70e-139 Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Csor.00g011980 vs. NCBI nr
Match: XP_008464041.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-1 [Cucumis melo]) HSP 1 Score: 395 bits (1014), Expect = 2.82e-138 Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0
BLAST of Csor.00g011980 vs. ExPASy TrEMBL
Match: A0A6J1KY88 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita maxima OX=3661 GN=LOC111499824 PE=3 SV=1) HSP 1 Score: 401 bits (1030), Expect = 4.96e-141 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Csor.00g011980 vs. ExPASy TrEMBL
Match: A0A6J1G8P2 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111451864 PE=3 SV=1) HSP 1 Score: 399 bits (1026), Expect = 2.02e-140 Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Csor.00g011980 vs. ExPASy TrEMBL
Match: A0A1S3CKJ5 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103502021 PE=3 SV=1) HSP 1 Score: 395 bits (1014), Expect = 1.36e-138 Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0
BLAST of Csor.00g011980 vs. ExPASy TrEMBL
Match: A0A0A0KH44 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G185300 PE=3 SV=1) HSP 1 Score: 388 bits (997), Expect = 5.33e-136 Identity = 194/199 (97.49%), Postives = 194/199 (97.49%), Query Frame = 0
BLAST of Csor.00g011980 vs. ExPASy TrEMBL
Match: A0A6J1FSV7 (Peptidyl-prolyl cis-trans isomerase OS=Cucurbita moschata OX=3662 GN=LOC111448466 PE=3 SV=1) HSP 1 Score: 378 bits (971), Expect = 4.90e-132 Identity = 186/199 (93.47%), Postives = 194/199 (97.49%), Query Frame = 0
BLAST of Csor.00g011980 vs. TAIR 10
Match: AT5G58710.1 (rotamase CYP 7 ) HSP 1 Score: 347.8 bits (891), Expect = 5.9e-96 Identity = 167/199 (83.92%), Postives = 182/199 (91.46%), Query Frame = 0
BLAST of Csor.00g011980 vs. TAIR 10
Match: AT2G29960.1 (cyclophilin 5 ) HSP 1 Score: 335.9 bits (860), Expect = 2.3e-92 Identity = 165/199 (82.91%), Postives = 179/199 (89.95%), Query Frame = 0
BLAST of Csor.00g011980 vs. TAIR 10
Match: AT2G29960.2 (cyclophilin 5 ) HSP 1 Score: 313.5 bits (802), Expect = 1.2e-85 Identity = 158/199 (79.40%), Postives = 170/199 (85.43%), Query Frame = 0
BLAST of Csor.00g011980 vs. TAIR 10
Match: AT3G55920.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 290.8 bits (743), Expect = 8.6e-79 Identity = 134/169 (79.29%), Postives = 154/169 (91.12%), Query Frame = 0
BLAST of Csor.00g011980 vs. TAIR 10
Match: AT4G38740.1 (rotamase CYP 1 ) HSP 1 Score: 245.4 bits (625), Expect = 4.2e-65 Identity = 114/163 (69.94%), Postives = 132/163 (80.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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