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Csor.00g011480 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCATCACCAAAAGGAAGACAAGTTTGAGATTTTACTCTCCACTTTGGAGCTGAAGTTGCAGAGTTCTTGTTTTCGACACGAGGACGAGGACGAGGAAGAAGAAGAAGATTGTCGGGATGATTTCGTCAAGACTCCGAGATCTTTGGAGCCTCCAGCGGTTCTCGAGTGTCCTCCGCCGCCGAGAAAGCCGAGGAGGTTTCCATCGGCGAAACGGAAGGCCGGTGATAGCAGGTCGATCTTTATGTCGCATCATTGTCTCTTCGGCGAAATGGAGGTTGATTTGGAGCTGCTGTTTCCTTCGAACCAGCTTCATGGCGGTCGGATTGTTAAGAAGGTGAAACGACGACGTTTCTTTTGA ATGGAGCATCACCAAAAGGAAGACAAGTTTGAGATTTTACTCTCCACTTTGGAGCTGAAGTTGCAGAGTTCTTGTTTTCGACACGAGGACGAGGACGAGGAAGAAGAAGAAGATTGTCGGGATGATTTCGTCAAGACTCCGAGATCTTTGGAGCCTCCAGCGGTTCTCGAGTGTCCTCCGCCGCCGAGAAAGCCGAGGAGGTTTCCATCGGCGAAACGGAAGGCCGGTGATAGCAGGTCGATCTTTATGTCGCATCATTGTCTCTTCGGCGAAATGGAGGTTGATTTGGAGCTGCTGTTTCCTTCGAACCAGCTTCATGGCGGTCGGATTGTTAAGAAGGTGAAACGACGACGTTTCTTTTGA ATGGAGCATCACCAAAAGGAAGACAAGTTTGAGATTTTACTCTCCACTTTGGAGCTGAAGTTGCAGAGTTCTTGTTTTCGACACGAGGACGAGGACGAGGAAGAAGAAGAAGATTGTCGGGATGATTTCGTCAAGACTCCGAGATCTTTGGAGCCTCCAGCGGTTCTCGAGTGTCCTCCGCCGCCGAGAAAGCCGAGGAGGTTTCCATCGGCGAAACGGAAGGCCGGTGATAGCAGGTCGATCTTTATGTCGCATCATTGTCTCTTCGGCGAAATGGAGGTTGATTTGGAGCTGCTGTTTCCTTCGAACCAGCTTCATGGCGGTCGGATTGTTAAGAAGGTGAAACGACGACGTTTCTTTTGA MEHHQKEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAVLECPPPPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF Homology
BLAST of Csor.00g011480 vs. NCBI nr
Match: KAG6605463.1 (hypothetical protein SDJN03_02780, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 245 bits (625), Expect = 8.86e-82 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Csor.00g011480 vs. NCBI nr
Match: XP_022947800.1 (cyclin-dependent protein kinase inhibitor SMR10-like [Cucurbita moschata]) HSP 1 Score: 240 bits (613), Expect = 6.00e-80 Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0
BLAST of Csor.00g011480 vs. NCBI nr
Match: XP_023532326.1 (cyclin-dependent protein kinase inhibitor SMR14 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 226 bits (576), Expect = 2.56e-74 Identity = 113/120 (94.17%), Postives = 114/120 (95.00%), Query Frame = 0
BLAST of Csor.00g011480 vs. NCBI nr
Match: XP_023006801.1 (cyclin-dependent protein kinase inhibitor SMR14-like [Cucurbita maxima]) HSP 1 Score: 211 bits (536), Expect = 3.23e-68 Identity = 109/121 (90.08%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of Csor.00g011480 vs. NCBI nr
Match: KAG6570710.1 (hypothetical protein SDJN03_29625, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 115 bits (289), Expect = 2.44e-28 Identity = 63/104 (60.58%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of Csor.00g011480 vs. ExPASy TrEMBL
Match: A0A6J1G7X1 (cyclin-dependent protein kinase inhibitor SMR10-like OS=Cucurbita moschata OX=3662 GN=LOC111451555 PE=4 SV=1) HSP 1 Score: 240 bits (613), Expect = 2.91e-80 Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0
BLAST of Csor.00g011480 vs. ExPASy TrEMBL
Match: A0A6J1KYS4 (cyclin-dependent protein kinase inhibitor SMR14-like OS=Cucurbita maxima OX=3661 GN=LOC111499465 PE=4 SV=1) HSP 1 Score: 211 bits (536), Expect = 1.56e-68 Identity = 109/121 (90.08%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of Csor.00g011480 vs. ExPASy TrEMBL
Match: A0A0A0KHB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190470 PE=4 SV=1) HSP 1 Score: 105 bits (263), Expect = 6.71e-27 Identity = 72/122 (59.02%), Postives = 86/122 (70.49%), Query Frame = 0
BLAST of Csor.00g011480 vs. ExPASy TrEMBL
Match: A0A2P5AJJ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_326230 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.19e-11 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 0
BLAST of Csor.00g011480 vs. ExPASy TrEMBL
Match: A0A2P5EJ99 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_186180 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.22e-11 Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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