Csor.00g011480 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g011480
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR10-like
LocationCsor_Chr02: 4919551 .. 4919913 (+)
RNA-Seq ExpressionCsor.00g011480
SyntenyCsor.00g011480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCATCACCAAAAGGAAGACAAGTTTGAGATTTTACTCTCCACTTTGGAGCTGAAGTTGCAGAGTTCTTGTTTTCGACACGAGGACGAGGACGAGGAAGAAGAAGAAGATTGTCGGGATGATTTCGTCAAGACTCCGAGATCTTTGGAGCCTCCAGCGGTTCTCGAGTGTCCTCCGCCGCCGAGAAAGCCGAGGAGGTTTCCATCGGCGAAACGGAAGGCCGGTGATAGCAGGTCGATCTTTATGTCGCATCATTGTCTCTTCGGCGAAATGGAGGTTGATTTGGAGCTGCTGTTTCCTTCGAACCAGCTTCATGGCGGTCGGATTGTTAAGAAGGTGAAACGACGACGTTTCTTTTGA

mRNA sequence

ATGGAGCATCACCAAAAGGAAGACAAGTTTGAGATTTTACTCTCCACTTTGGAGCTGAAGTTGCAGAGTTCTTGTTTTCGACACGAGGACGAGGACGAGGAAGAAGAAGAAGATTGTCGGGATGATTTCGTCAAGACTCCGAGATCTTTGGAGCCTCCAGCGGTTCTCGAGTGTCCTCCGCCGCCGAGAAAGCCGAGGAGGTTTCCATCGGCGAAACGGAAGGCCGGTGATAGCAGGTCGATCTTTATGTCGCATCATTGTCTCTTCGGCGAAATGGAGGTTGATTTGGAGCTGCTGTTTCCTTCGAACCAGCTTCATGGCGGTCGGATTGTTAAGAAGGTGAAACGACGACGTTTCTTTTGA

Coding sequence (CDS)

ATGGAGCATCACCAAAAGGAAGACAAGTTTGAGATTTTACTCTCCACTTTGGAGCTGAAGTTGCAGAGTTCTTGTTTTCGACACGAGGACGAGGACGAGGAAGAAGAAGAAGATTGTCGGGATGATTTCGTCAAGACTCCGAGATCTTTGGAGCCTCCAGCGGTTCTCGAGTGTCCTCCGCCGCCGAGAAAGCCGAGGAGGTTTCCATCGGCGAAACGGAAGGCCGGTGATAGCAGGTCGATCTTTATGTCGCATCATTGTCTCTTCGGCGAAATGGAGGTTGATTTGGAGCTGCTGTTTCCTTCGAACCAGCTTCATGGCGGTCGGATTGTTAAGAAGGTGAAACGACGACGTTTCTTTTGA

Protein sequence

MEHHQKEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAVLECPPPPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Homology
BLAST of Csor.00g011480 vs. NCBI nr
Match: KAG6605463.1 (hypothetical protein SDJN03_02780, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 245 bits (625), Expect = 8.86e-82
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0

Query: 1   MEHHQKEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAVLECPP 60
           MEHHQKEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAVLECPP
Sbjct: 1   MEHHQKEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAVLECPP 60

Query: 61  PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120
           PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Sbjct: 61  PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120

BLAST of Csor.00g011480 vs. NCBI nr
Match: XP_022947800.1 (cyclin-dependent protein kinase inhibitor SMR10-like [Cucurbita moschata])

HSP 1 Score: 240 bits (613), Expect = 6.00e-80
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0

Query: 1   MEHHQKEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAVLECPP 60
           MEHHQKEDKFEILLSTLELKLQSSCFR EDEDE+EEEDCRDDFVKTPRSLEPPAVLECPP
Sbjct: 1   MEHHQKEDKFEILLSTLELKLQSSCFRREDEDEKEEEDCRDDFVKTPRSLEPPAVLECPP 60

Query: 61  PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120
           PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Sbjct: 61  PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120

BLAST of Csor.00g011480 vs. NCBI nr
Match: XP_023532326.1 (cyclin-dependent protein kinase inhibitor SMR14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226 bits (576), Expect = 2.56e-74
Identity = 113/120 (94.17%), Postives = 114/120 (95.00%), Query Frame = 0

Query: 1   MEHHQKEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAVLECPP 60
           MEHH KEDKFEILLSTLELKLQSSCFRHEDE EEEEEDCRDDFVKTPRSL+PPAVLECPP
Sbjct: 1   MEHHPKEDKFEILLSTLELKLQSSCFRHEDE-EEEEEDCRDDFVKTPRSLKPPAVLECPP 60

Query: 61  PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120
           PPRKPRR PS KRKAG  RSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Sbjct: 61  PPRKPRRLPSMKRKAGGGRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 119

BLAST of Csor.00g011480 vs. NCBI nr
Match: XP_023006801.1 (cyclin-dependent protein kinase inhibitor SMR14-like [Cucurbita maxima])

HSP 1 Score: 211 bits (536), Expect = 3.23e-68
Identity = 109/121 (90.08%), Postives = 112/121 (92.56%), Query Frame = 0

Query: 1   MEHH-QKEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAVLECP 60
           MEHH QKEDKFEILLSTLELKLQSSCFRHEDE  EEEEDCRDDFVKTPRSLEP  VL+CP
Sbjct: 1   MEHHPQKEDKFEILLSTLELKLQSSCFRHEDE--EEEEDCRDDFVKTPRSLEPAVVLQCP 60

Query: 61  PPPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRF 120
           PPPRKPRR PSAKRKAG  RSIFMSH+CLF EMEVDLELLFPSNQL+GGRIVKKVKRRRF
Sbjct: 61  PPPRKPRRLPSAKRKAGVGRSIFMSHNCLFREMEVDLELLFPSNQLYGGRIVKKVKRRRF 119

BLAST of Csor.00g011480 vs. NCBI nr
Match: KAG6570710.1 (hypothetical protein SDJN03_29625, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 115 bits (289), Expect = 2.44e-28
Identity = 63/104 (60.58%), Postives = 75/104 (72.12%), Query Frame = 0

Query: 6   KEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCR-DDFVKTPRSLEPPAVLECPPPPRK 65
           KEDKFEILLSTLEL+L  S F    E+EE+ ++ R DD VKTPRSLEP A+LECPPPPRK
Sbjct: 8   KEDKFEILLSTLELRLPLSSFCLRPEEEEDNDEARPDDLVKTPRSLEPAAILECPPPPRK 67

Query: 66  PRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGG 108
           PRR PS +++    R  FM H  +FGEM+  LE+LFPSN    G
Sbjct: 68  PRRLPSVRKRKAGGRLTFMPHDYVFGEMK-SLEVLFPSNLFDVG 110

BLAST of Csor.00g011480 vs. ExPASy TrEMBL
Match: A0A6J1G7X1 (cyclin-dependent protein kinase inhibitor SMR10-like OS=Cucurbita moschata OX=3662 GN=LOC111451555 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 2.91e-80
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0

Query: 1   MEHHQKEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAVLECPP 60
           MEHHQKEDKFEILLSTLELKLQSSCFR EDEDE+EEEDCRDDFVKTPRSLEPPAVLECPP
Sbjct: 1   MEHHQKEDKFEILLSTLELKLQSSCFRREDEDEKEEEDCRDDFVKTPRSLEPPAVLECPP 60

Query: 61  PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120
           PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF
Sbjct: 61  PPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRFF 120

BLAST of Csor.00g011480 vs. ExPASy TrEMBL
Match: A0A6J1KYS4 (cyclin-dependent protein kinase inhibitor SMR14-like OS=Cucurbita maxima OX=3661 GN=LOC111499465 PE=4 SV=1)

HSP 1 Score: 211 bits (536), Expect = 1.56e-68
Identity = 109/121 (90.08%), Postives = 112/121 (92.56%), Query Frame = 0

Query: 1   MEHH-QKEDKFEILLSTLELKLQSSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAVLECP 60
           MEHH QKEDKFEILLSTLELKLQSSCFRHEDE  EEEEDCRDDFVKTPRSLEP  VL+CP
Sbjct: 1   MEHHPQKEDKFEILLSTLELKLQSSCFRHEDE--EEEEDCRDDFVKTPRSLEPAVVLQCP 60

Query: 61  PPPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKKVKRRRF 120
           PPPRKPRR PSAKRKAG  RSIFMSH+CLF EMEVDLELLFPSNQL+GGRIVKKVKRRRF
Sbjct: 61  PPPRKPRRLPSAKRKAGVGRSIFMSHNCLFREMEVDLELLFPSNQLYGGRIVKKVKRRRF 119

BLAST of Csor.00g011480 vs. ExPASy TrEMBL
Match: A0A0A0KHB1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190470 PE=4 SV=1)

HSP 1 Score: 105 bits (263), Expect = 6.71e-27
Identity = 72/122 (59.02%), Postives = 86/122 (70.49%), Query Frame = 0

Query: 2   EHHQKEDKFEILLSTLELKLQ----SSCFRHEDEDEEEEEDCRDDFVKTPRSLEPPAV-L 61
           E  +K +KFEILLSTLEL+L     S C      D+E+E D  DD +KTPRSLEP +V L
Sbjct: 7   EDGKKLEKFEILLSTLELRLPLPLPSFCCLG---DKEKEVDRGDDLMKTPRSLEPTSVVL 66

Query: 62  ECPPPPRKPRRFPSA-KRKAGDS--RSIFMSHHCLFGEMEVDLELLFPSNQLHGGRIVKK 115
           +CPPPPRKPRRFPSA KRKAG    RSI MSH   F ++E+D   LFPSN + GG+IVKK
Sbjct: 67  QCPPPPRKPRRFPSAAKRKAGGGGGRSILMSHDYFFRDVELDW--LFPSNVV-GGKIVKK 122

BLAST of Csor.00g011480 vs. ExPASy TrEMBL
Match: A0A2P5AJJ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_326230 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.19e-11
Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 0

Query: 5   QKEDKFEILLSTLELKLQSSCFRHED--------EDEEEEEDC----RDDFVKTPRSLEP 64
           +KEDKFE+L+STL+LK+ S     E+        +D+E    C     DD  KTP SL+ 
Sbjct: 63  KKEDKFEMLVSTLKLKIPSHHHHVEEFITRDADHDDQENSNGCDNNNNDDGFKTPTSLDN 122

Query: 65  --PAVLECPPPPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLH--GG 116
             P VL CPP PRKP+   +  ++  + R +F+       ++  ++E LFP N L   GG
Sbjct: 123 KIPVVLPCPPAPRKPKSTIAKTKRKANRRRVFL-------DLSSEIESLFPHNVLADLGG 182

BLAST of Csor.00g011480 vs. ExPASy TrEMBL
Match: A0A2P5EJ99 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_186180 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.22e-11
Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = 0

Query: 5   QKEDKFEILLSTLELKLQSSCFRHE--------DEDEEEEEDCR-------DDFVKTPRS 64
           ++EDKFE+L+STL+LK+ S    H         D D +++E+         DD  KTP S
Sbjct: 63  KEEDKFEMLVSTLKLKIPSHHHHHHHVEEFITRDADHDDQENINGCDNNNNDDGFKTPTS 122

Query: 65  LEP--PAVLECPPPPRKPRRFPSAKRKAGDSRSIFMSHHCLFGEMEVDLELLFPSNQLH- 116
           L+   P VL CPP PRKP+   +  ++    R +F+       ++  ++E LFPSN L  
Sbjct: 123 LDNKIPVVLPCPPAPRKPKSTIAKTKRKAKRRRVFL-------DLSSEIESLFPSNVLAD 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6605463.18.86e-82100.00hypothetical protein SDJN03_02780, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022947800.16.00e-8098.33cyclin-dependent protein kinase inhibitor SMR10-like [Cucurbita moschata][more]
XP_023532326.12.56e-7494.17cyclin-dependent protein kinase inhibitor SMR14 [Cucurbita pepo subsp. pepo][more]
XP_023006801.13.23e-6890.08cyclin-dependent protein kinase inhibitor SMR14-like [Cucurbita maxima][more]
KAG6570710.12.44e-2860.58hypothetical protein SDJN03_29625, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1G7X12.91e-8098.33cyclin-dependent protein kinase inhibitor SMR10-like OS=Cucurbita moschata OX=36... [more]
A0A6J1KYS41.56e-6890.08cyclin-dependent protein kinase inhibitor SMR14-like OS=Cucurbita maxima OX=3661... [more]
A0A0A0KHB16.71e-2759.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190470 PE=4 SV=1[more]
A0A2P5AJJ22.19e-1137.50Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_326230 PE... [more]
A0A2P5EJ993.22e-1136.64Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_186180 PE=4 SV... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g011480.m01Csor.00g011480.m01mRNA