Csor.00g010780 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAATCAGAGCACCTGCTTGTCCTATGAGAAGCTCAACGGAGTGGCGACCTGGGTAGGCACCAGCGTCGCCTCCGCCTTCTTCGCCTCTCTCGAGAGTTGTTCCTGCATCAATCTCTCTACCTCCGACGACCACGAAGATCCCGACGAGGCTCACGATCGCCCTCTAATGTACTGCACCTCCACTTCTTCCTCCATCATCCGCAGCTTTGAACCGCTTCCCCCGCCGGTCAACGACGTCGCCAATCTTCCTGTCTGA ATGGAGAATCAGAGCACCTGCTTGTCCTATGAGAAGCTCAACGGAGTGGCGACCTGGGTAGGCACCAGCGTCGCCTCCGCCTTCTTCGCCTCTCTCGAGAGTTGTTCCTGCATCAATCTCTCTACCTCCGACGACCACGAAGATCCCGACGAGGCTCACGATCGCCCTCTAATGTACTGCACCTCCACTTCTTCCTCCATCATCCGCAGCTTTGAACCGCTTCCCCCGCCGGTCAACGACGTCGCCAATCTTCCTGTCTGA ATGGAGAATCAGAGCACCTGCTTGTCCTATGAGAAGCTCAACGGAGTGGCGACCTGGGTAGGCACCAGCGTCGCCTCCGCCTTCTTCGCCTCTCTCGAGAGTTGTTCCTGCATCAATCTCTCTACCTCCGACGACCACGAAGATCCCGACGAGGCTCACGATCGCCCTCTAATGTACTGCACCTCCACTTCTTCCTCCATCATCCGCAGCTTTGAACCGCTTCCCCCGCCGGTCAACGACGTCGCCAATCTTCCTGTCTGA MENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSIIRSFEPLPPPVNDVANLPV Homology
BLAST of Csor.00g010780 vs. NCBI nr
Match: XP_023551548.1 (uncharacterized protein LOC111809337 [Cucurbita pepo subsp. pepo] >XP_023551549.1 uncharacterized protein LOC111809337 [Cucurbita pepo subsp. pepo] >KAG6579314.1 hypothetical protein SDJN03_23762, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 175 bits (443), Expect = 4.31e-55 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Csor.00g010780 vs. NCBI nr
Match: XP_022922222.1 (uncharacterized protein LOC111430272 [Cucurbita moschata] >XP_022922223.1 uncharacterized protein LOC111430272 [Cucurbita moschata]) HSP 1 Score: 174 bits (442), Expect = 6.13e-55 Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Csor.00g010780 vs. NCBI nr
Match: KAG7016815.1 (hypothetical protein SDJN02_21926, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 175 bits (443), Expect = 6.63e-55 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Csor.00g010780 vs. NCBI nr
Match: XP_022972977.1 (uncharacterized protein LOC111471501 [Cucurbita maxima] >XP_022972979.1 uncharacterized protein LOC111471501 [Cucurbita maxima]) HSP 1 Score: 174 bits (440), Expect = 1.24e-54 Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Csor.00g010780 vs. NCBI nr
Match: XP_031742148.1 (uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus]) HSP 1 Score: 170 bits (430), Expect = 1.36e-52 Identity = 82/86 (95.35%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Csor.00g010780 vs. ExPASy TrEMBL
Match: A0A6J1E5Z9 (uncharacterized protein LOC111430272 OS=Cucurbita moschata OX=3662 GN=LOC111430272 PE=4 SV=1) HSP 1 Score: 174 bits (442), Expect = 2.97e-55 Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Csor.00g010780 vs. ExPASy TrEMBL
Match: A0A6J1ID63 (uncharacterized protein LOC111471501 OS=Cucurbita maxima OX=3661 GN=LOC111471501 PE=4 SV=1) HSP 1 Score: 174 bits (440), Expect = 5.99e-55 Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Csor.00g010780 vs. ExPASy TrEMBL
Match: A0A0A0KLU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139175 PE=4 SV=1) HSP 1 Score: 170 bits (430), Expect = 2.01e-53 Identity = 82/86 (95.35%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Csor.00g010780 vs. ExPASy TrEMBL
Match: A0A6J1H0Y4 (uncharacterized protein LOC111459420 OS=Cucurbita moschata OX=3662 GN=LOC111459420 PE=4 SV=1) HSP 1 Score: 165 bits (418), Expect = 1.41e-51 Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Csor.00g010780 vs. ExPASy TrEMBL
Match: A0A1S3AU63 (uncharacterized protein LOC103482984 OS=Cucumis melo OX=3656 GN=LOC103482984 PE=4 SV=1) HSP 1 Score: 165 bits (418), Expect = 3.91e-51 Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Csor.00g010780 vs. TAIR 10
Match: AT4G10810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24026.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 1.3e-12 Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0
BLAST of Csor.00g010780 vs. TAIR 10
Match: AT4G24026.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 1.9e-11 Identity = 32/57 (56.14%), Postives = 41/57 (71.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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