Csor.00g010690 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCTACTTTCCTGGGATACTGGAGAAGGCGTTTTCTTGGCTTCTCTTGTTCTTCAAAGCTTTGGAAATGTATGCTGAAACTGAGCATTTGCTTCCTTATTTCCAGAATTTCTCTGATGAATTTCAACTAGCAAAGGATTTCTGCAAGACCCACAAGCTTGATTCTCCATTGGTACTCTTTTTGCTTCTGGGTTGCATTTTTTTTGGATGATTATGAACTGGGTTTGTGTTTAAACTTGCTGATTGCCTTGTTTTTGGATGATTATGAACTGGGTTTGTGTTTAAACTTGCTGAATGCCTTGTTTTTGGGCTTGATTCTGTGTTTTGGTTGCTGTTTTTGTTGGATTATGACTTCTAATGCTTAGTTCATTGAGAAATTGAGAAGAAAAGCCTCAGAGAATACTTTCTTTGGTACACCATTGTTTCTGTGTCTGCTTTACATGCTGGATCTGGTAAAGGATGTGTGCAAAAAGGCATATAAAAGGAGACTGAAAAACAGAACAGCTTCAATCATTCTTCCTTTTGAATCCATTATTTTCTACTGTTCTTTTGCTTAATCTTCATGGAAAAGTGTTTTTAAGAGAGGAAAATGGCCTGAGAGAGCTGGTGGAGATATGTTCTTAGTGATGGAAGTGGTAATGTTTGTTTATGAGAGCTGTTTAAGCTATGATATCTGCAAAGGTTCAGTATAAATAGTTTTGATTCCTTATCTGTTCATCATAGAATATGTTCACCTGTTTGTTGTATCCTTTAGGTAGCATTAAGGATTAGTTTGATTGTTTATGTTCATCTGGAAAAGAGAGCTCTTCTTTGGTTGGTTTCGTTTTTCATCCTTCGAATTCGTTCTTCTAATGCAGAGCAACATGGTTCAAACGTCGACGGTATGTGAATACAACATGGGTGGTGAAGGGGATCTATTCAAAGCTCCAGAGCCAATTATTGAGGAATCGTTTTCGGGTCTCGATCCTATGATGGCTGCGATTTCTATGATGTCGTGTGGCAACACGAATATCTCGTTGGAGGGACTTGAAGATGCTGATTTTGAATCACTTCAAAGTGATCAGCTCTTGAGTGAGGTTTACTATGAATGTGAGAAGGATCTTTTAGAGAAAGCAGCTATACAAACACCGATATCTGAAGTTCTCGATCTTAAGGATCAGATTTCAAAGACGGACGAACACCGAATTCCAGAAAACAAACCAGTTCTTGATGCAACACTTCAGAAGAGTGTTAGCTCTGGATGCTTAAGATCAATGGAATGGATTCCAGGCCCTGCCATGAAGTCAAGTCTTTTAGATTTTAGTGGAATGGATATCAATGAGGTCTATGGGATGCGACGGGCGTATAGCGAAAACGATATCAAGGTAAGACTTTGTTTCTAACTTCATCATCAAAAGTTCTTTACATGTTGTCGAGCTATTTAATATTTCGGAAACGAAGCATTCACAAATTTGATACAGAAACCGACATGAAGAAGAATTGAAACATTCATGATTCGAGTAAAATAGGTGTTATATGTTGTCTTAAATCATCTTCACATGTTAATTGGTGGCTTTTTGTTGTTTCTGAACTTCTGTTGCAGACTCTTAACAATGGCAATAGGAGCCAGTTCCATTCTCCTCTTGAACGGCCATTGTTAGTCAGCAATTGCACAGCCGAAGAACGCAAAGAAAAGCTCTCAAGATATCGAAATAAAAAGACAAAAAGGAACTTCGGGAGAAAGATCAAGGTAACTAATTTATACAGTCGAACGAGTTAGTAACACTCAAAGGGGATCGTTCACTTCTATCAATGGATTCGGTTCATACCAGATATATTCATCAATGTCGTGTTTAAATCTATAGACTACACAATGCAGCAGCATGTTTAGCGATTATTTTTCCGAAAAAAACGATTGATGAGACGAATGCTAAGAACAGAATGGTTTTTTTTTGTTGACAGTATGCTTGCAGAAAGGCTCTGGCTGACAGTCAACCAAGAATCAGAGGAAGGTTTGCGAAGACTGAAGAATGTTAGATGAGGAACATCAGGAAAAGCATGAATCTGCAGTTAGAAGGATAGTTGATTTGTAAATATTGTTTGCTTAATAAGAACAAGAACGAGAACGAGAACGAGAACGAGAACGAGAAGCATGAAGGAAGTGTTTGTTGATAGTAGTAGTCTAAAGCTGTGCACTGTTAATGTATTATTAAGAGTCTGTATTGTTGTAATTCAAGTGTTCTCTAATCATCCTTCTAAGAACATTCTCTCAAACAATGTCTATGTTCATTTCTTTTCGATCCTCTCATCTCCAACCACTAAATTCTTCACTTTTTTTATATTTTATATATAAGTGAAAATCAAATGAAGGGTAGTTTAGGTATTACACAAAAGAAGTGAGGTTAGTGTTGTCCAACAAAGTTTCTTTGACCCGCTCACAAAACTTAAGGGACCAATCATCATTAAGTTGCACTCCATTCTTAAACTTAAAAAAATGTTTAATATAATACTAAACTTTCAATTCTGTATTTTATCGATGTCTTTGTTTTTCATCCATATATATTAAAAAACATTGTTTTAAAAAAAAATCTATTTATAATAATTTCAAATTTTCAAGGTAGAAAATAATTATAACTAACCTAAAACATTTTTTTTAAAATATATTTATTTATTATTATATTAATATCTAAAAGTGAGGCATGGGAAGGAGGAAGAATATTCCGGATCCCCATTTCCGGTTAGCTAACAAAGAAAAATCTCTCCTCACTTCCTTCTTGATTTCCAAACGGAGAATTCCCACTATATTTCTAACAAAAATACGCTCTCTATCATCTTATTCACAAGCATTTTAGTCCAGTTAGTTCACTACTATATGAACAGCATCAGAACTCAAAAGAAAGCTGGAATTAGTGACATTTTCAAAACACTTAAAAGAGTTTAGATATTACCTTGCAGGTCGAAGCTCCCCAGCTCGGCGGTTGTGTTTGGCTCCTGAGAATGGACAACTTCCTTGGAGGGGATTACTAAGAGTAACTGACCAAGAACAAAAGCAAGCAACCTCAAGACACACTATGCACCAATGTGCAGAAGAACAGTAG ATGACCTACTTTCCTGGGATACTGGAGAAGGCGTTTTCTTGGCTTCTCTTGTTCTTCAAAGCTTTGGAAATGTATGCTGAAACTGAGCATTTGCTTCCTTATTTCCAGAATTTCTCTGATGAATTTCAACTAGCAAAGGATTTCTGCAAGACCCACAAGCTTGATTCTCCATTGAGCAACATGGTTCAAACGTCGACGGTATGTGAATACAACATGGGTGGTGAAGGGGATCTATTCAAAGCTCCAGAGCCAATTATTGAGGAATCGTTTTCGGGTCTCGATCCTATGATGGCTGCGATTTCTATGATGTCGTGTGGCAACACGAATATCTCGTTGGAGGGACTTGAAGATGCTGATTTTGAATCACTTCAAAGTGATCAGCTCTTGAGTGAGGTTTACTATGAATGTGAGAAGGATCTTTTAGAGAAAGCAGCTATACAAACACCGATATCTGAAGTTCTCGATCTTAAGGATCAGATTTCAAAGACGGACGAACACCGAATTCCAGAAAACAAACCAGTTCTTGATGCAACACTTCAGAAGAGTGTTAGCTCTGGATGCTTAAGATCAATGGAATGGATTCCAGGCCCTGCCATGAAGTCAAGTCTTTTAGATTTTAGTGGAATGGATATCAATGAGGTCTATGGGATGCGACGGGCGTATAGCGAAAACGATATCAAGACTCTTAACAATGGCAATAGGAGCCAGTTCCATTCTCCTCTTGAACGGCCATTGTTAGTCAGCAATTGCACAGCCGAAGAACGCAAAGAAAAGCTCTCAAGATATCGAAATAAAAAGACAAAAAGGAACTTCGGGAGAAAGATCAAGTATGCTTGCAGAAAGGCTCTGGCTGACAGTCAACCAAGAATCAGAGGAAGGTTTGCGAAGACTGAAGAATGTCGAAGCTCCCCAGCTCGGCGGTTGTGTTTGGCTCCTGAGAATGGACAACTTCCTTGGAGGGGATTACTAAGAGTAACTGACCAAGAACAAAAGCAAGCAACCTCAAGACACACTATGCACCAATGTGCAGAAGAACAGTAG ATGACCTACTTTCCTGGGATACTGGAGAAGGCGTTTTCTTGGCTTCTCTTGTTCTTCAAAGCTTTGGAAATGTATGCTGAAACTGAGCATTTGCTTCCTTATTTCCAGAATTTCTCTGATGAATTTCAACTAGCAAAGGATTTCTGCAAGACCCACAAGCTTGATTCTCCATTGAGCAACATGGTTCAAACGTCGACGGTATGTGAATACAACATGGGTGGTGAAGGGGATCTATTCAAAGCTCCAGAGCCAATTATTGAGGAATCGTTTTCGGGTCTCGATCCTATGATGGCTGCGATTTCTATGATGTCGTGTGGCAACACGAATATCTCGTTGGAGGGACTTGAAGATGCTGATTTTGAATCACTTCAAAGTGATCAGCTCTTGAGTGAGGTTTACTATGAATGTGAGAAGGATCTTTTAGAGAAAGCAGCTATACAAACACCGATATCTGAAGTTCTCGATCTTAAGGATCAGATTTCAAAGACGGACGAACACCGAATTCCAGAAAACAAACCAGTTCTTGATGCAACACTTCAGAAGAGTGTTAGCTCTGGATGCTTAAGATCAATGGAATGGATTCCAGGCCCTGCCATGAAGTCAAGTCTTTTAGATTTTAGTGGAATGGATATCAATGAGGTCTATGGGATGCGACGGGCGTATAGCGAAAACGATATCAAGACTCTTAACAATGGCAATAGGAGCCAGTTCCATTCTCCTCTTGAACGGCCATTGTTAGTCAGCAATTGCACAGCCGAAGAACGCAAAGAAAAGCTCTCAAGATATCGAAATAAAAAGACAAAAAGGAACTTCGGGAGAAAGATCAAGTATGCTTGCAGAAAGGCTCTGGCTGACAGTCAACCAAGAATCAGAGGAAGGTTTGCGAAGACTGAAGAATGTCGAAGCTCCCCAGCTCGGCGGTTGTGTTTGGCTCCTGAGAATGGACAACTTCCTTGGAGGGGATTACTAAGAGTAACTGACCAAGAACAAAAGCAAGCAACCTCAAGACACACTATGCACCAATGTGCAGAAGAACAGTAG MTYFPGILEKAFSWLLLFFKALEMYAETEHLLPYFQNFSDEFQLAKDFCKTHKLDSPLSNMVQTSTVCEYNMGGEGDLFKAPEPIIEESFSGLDPMMAAISMMSCGNTNISLEGLEDADFESLQSDQLLSEVYYECEKDLLEKAAIQTPISEVLDLKDQISKTDEHRIPENKPVLDATLQKSVSSGCLRSMEWIPGPAMKSSLLDFSGMDINEVYGMRRAYSENDIKTLNNGNRSQFHSPLERPLLVSNCTAEERKEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEECRSSPARRLCLAPENGQLPWRGLLRVTDQEQKQATSRHTMHQCAEEQ Homology
BLAST of Csor.00g010690 vs. ExPASy Swiss-Prot
Match: O82117 (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.8e-07 Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = 0
BLAST of Csor.00g010690 vs. ExPASy Swiss-Prot
Match: Q96502 (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 4.6e-05 Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 0
BLAST of Csor.00g010690 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2) HSP 1 Score: 50.1 bits (118), Expect = 6.0e-05 Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of Csor.00g010690 vs. ExPASy Swiss-Prot
Match: Q39057 (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.0e-04 Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0
BLAST of Csor.00g010690 vs. ExPASy Swiss-Prot
Match: O23379 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2) HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04 Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
BLAST of Csor.00g010690 vs. NCBI nr
Match: KAG6579323.1 (Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 685 bits (1767), Expect = 2.26e-248 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0
BLAST of Csor.00g010690 vs. NCBI nr
Match: KAG7016824.1 (Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 593 bits (1529), Expect = 7.62e-213 Identity = 299/300 (99.67%), Postives = 299/300 (99.67%), Query Frame = 0
BLAST of Csor.00g010690 vs. NCBI nr
Match: XP_022922436.1 (uncharacterized protein LOC111430429 isoform X1 [Cucurbita moschata]) HSP 1 Score: 593 bits (1529), Expect = 7.62e-213 Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 0
BLAST of Csor.00g010690 vs. NCBI nr
Match: XP_022973053.1 (uncharacterized protein LOC111471557 isoform X1 [Cucurbita maxima]) HSP 1 Score: 587 bits (1513), Expect = 2.09e-210 Identity = 295/300 (98.33%), Postives = 299/300 (99.67%), Query Frame = 0
BLAST of Csor.00g010690 vs. NCBI nr
Match: XP_023551225.1 (uncharacterized protein LOC111809106 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 584 bits (1506), Expect = 2.44e-209 Identity = 295/300 (98.33%), Postives = 297/300 (99.00%), Query Frame = 0
BLAST of Csor.00g010690 vs. ExPASy TrEMBL
Match: A0A6J1E446 (uncharacterized protein LOC111430429 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430429 PE=4 SV=1) HSP 1 Score: 593 bits (1529), Expect = 3.69e-213 Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 0
BLAST of Csor.00g010690 vs. ExPASy TrEMBL
Match: A0A6J1IBX4 (uncharacterized protein LOC111471557 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471557 PE=4 SV=1) HSP 1 Score: 587 bits (1513), Expect = 1.01e-210 Identity = 295/300 (98.33%), Postives = 299/300 (99.67%), Query Frame = 0
BLAST of Csor.00g010690 vs. ExPASy TrEMBL
Match: A0A0A0KN81 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139450 PE=4 SV=1) HSP 1 Score: 499 bits (1285), Expect = 2.91e-176 Identity = 250/276 (90.58%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Csor.00g010690 vs. ExPASy TrEMBL
Match: A0A1S3AU23 (two-component response regulator-like APRR7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482962 PE=4 SV=1) HSP 1 Score: 498 bits (1281), Expect = 1.18e-175 Identity = 251/276 (90.94%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Csor.00g010690 vs. ExPASy TrEMBL
Match: A0A5A7TH31 (Two-component response regulator-like APRR7 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00500 PE=4 SV=1) HSP 1 Score: 497 bits (1280), Expect = 1.68e-175 Identity = 250/276 (90.58%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Csor.00g010690 vs. TAIR 10
Match: AT5G53420.1 (CCT motif family protein ) HSP 1 Score: 226.9 bits (577), Expect = 2.5e-59 Identity = 136/279 (48.75%), Postives = 189/279 (67.74%), Query Frame = 0
BLAST of Csor.00g010690 vs. TAIR 10
Match: AT4G27900.1 (CCT motif family protein ) HSP 1 Score: 223.0 bits (567), Expect = 3.7e-58 Identity = 139/281 (49.47%), Postives = 183/281 (65.12%), Query Frame = 0
BLAST of Csor.00g010690 vs. TAIR 10
Match: AT4G27900.2 (CCT motif family protein ) HSP 1 Score: 223.0 bits (567), Expect = 3.7e-58 Identity = 139/281 (49.47%), Postives = 183/281 (65.12%), Query Frame = 0
BLAST of Csor.00g010690 vs. TAIR 10
Match: AT5G53420.2 (CCT motif family protein ) HSP 1 Score: 165.6 bits (418), Expect = 7.0e-41 Identity = 105/200 (52.50%), Postives = 137/200 (68.50%), Query Frame = 0
BLAST of Csor.00g010690 vs. TAIR 10
Match: AT5G53420.3 (CCT motif family protein ) HSP 1 Score: 140.2 bits (352), Expect = 3.1e-33 Identity = 88/211 (41.71%), Postives = 130/211 (61.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|