Csor.00g010540 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g010540
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionWD repeat-containing protein 91-like protein
LocationCsor_Chr15: 8217778 .. 8218302 (-)
RNA-Seq ExpressionCsor.00g010540
SyntenyCsor.00g010540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCATGGGGAGTTGAAGAGGAGGTTTAAGGAGTTGATAGATGTGAATGAGAAGCAAGAAACAAAAGTGTGTTACCATAAAAACAAAGTTCAGAACATTGTTTTTGGCTATCTCATTTGGGTTCGTTTGTTCATCTACGGTATTTCTCAGGCTTTGTCCTTCAAGTGCAATAATTGGTGGGTCATTTTGGCTTTAAGTCTTTTATGGAATTTCATTTACTTTTTACTTTTCCTGGATGCTATGACCATGTTACATCGGGCTCAGTACCAGCTAGACATAATCTGCAAGGAACTAATTGAATTTTGCCAACAAAATTTGATACCCAAAAACCGAGATGATATGGATCTAGTGGAGGCTGGTGAATCTCGTGATGGATTTGAATTCGGTTTCCATAAGAAGATGCTCATGCTTGATCATTCTACAATTGTTGGGAGGAATGTTTATATCTATTTCATTGTCTGTGCTTTGCTTGCTGTTGCTGCGATTGAATTATATGCTTATAAGTACTTGCTATGCAAATGA

mRNA sequence

ATGGCGCATGGGGAGTTGAAGAGGAGGTTTAAGGAGTTGATAGATGTGAATGAGAAGCAAGAAACAAAAGTGTGTTACCATAAAAACAAAGTTCAGAACATTGTTTTTGGCTATCTCATTTGGGTTCGTTTGTTCATCTACGGTATTTCTCAGGCTTTGTCCTTCAAGTGCAATAATTGGTGGGTCATTTTGGCTTTAAGTCTTTTATGGAATTTCATTTACTTTTTACTTTTCCTGGATGCTATGACCATGTTACATCGGGCTCAGTACCAGCTAGACATAATCTGCAAGGAACTAATTGAATTTTGCCAACAAAATTTGATACCCAAAAACCGAGATGATATGGATCTAGTGGAGGCTGGTGAATCTCGTGATGGATTTGAATTCGGTTTCCATAAGAAGATGCTCATGCTTGATCATTCTACAATTGTTGGGAGGAATGTTTATATCTATTTCATTGTCTGTGCTTTGCTTGCTGTTGCTGCGATTGAATTATATGCTTATAAGTACTTGCTATGCAAATGA

Coding sequence (CDS)

ATGGCGCATGGGGAGTTGAAGAGGAGGTTTAAGGAGTTGATAGATGTGAATGAGAAGCAAGAAACAAAAGTGTGTTACCATAAAAACAAAGTTCAGAACATTGTTTTTGGCTATCTCATTTGGGTTCGTTTGTTCATCTACGGTATTTCTCAGGCTTTGTCCTTCAAGTGCAATAATTGGTGGGTCATTTTGGCTTTAAGTCTTTTATGGAATTTCATTTACTTTTTACTTTTCCTGGATGCTATGACCATGTTACATCGGGCTCAGTACCAGCTAGACATAATCTGCAAGGAACTAATTGAATTTTGCCAACAAAATTTGATACCCAAAAACCGAGATGATATGGATCTAGTGGAGGCTGGTGAATCTCGTGATGGATTTGAATTCGGTTTCCATAAGAAGATGCTCATGCTTGATCATTCTACAATTGTTGGGAGGAATGTTTATATCTATTTCATTGTCTGTGCTTTGCTTGCTGTTGCTGCGATTGAATTATATGCTTATAAGTACTTGCTATGCAAATGA

Protein sequence

MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSFKCNNWWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDLVEAGESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK
Homology
BLAST of Csor.00g010540 vs. NCBI nr
Match: KAG6579338.1 (hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 351 bits (900), Expect = 5.87e-122
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0

Query: 1   MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSFKCNNW 60
           MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSFKCNNW
Sbjct: 1   MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSFKCNNW 60

Query: 61  WVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDLVEA 120
           WVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDLVEA
Sbjct: 61  WVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDLVEA 120

Query: 121 GESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK 174
           GESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK
Sbjct: 121 GESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK 174

BLAST of Csor.00g010540 vs. NCBI nr
Match: KAG7016840.1 (hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 341 bits (874), Expect = 1.85e-117
Identity = 170/174 (97.70%), Postives = 170/174 (97.70%), Query Frame = 0

Query: 1   MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSFKCNNW 60
           MAHGELKRR KELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLF YGISQALSFKCNNW
Sbjct: 36  MAHGELKRRIKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFFYGISQALSFKCNNW 95

Query: 61  WVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDLVEA 120
           WVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDLVEA
Sbjct: 96  WVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDLVEA 155

Query: 121 GESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK 174
           GES D FEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK
Sbjct: 156 GESCDRFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK 209

BLAST of Csor.00g010540 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])

HSP 1 Score: 229 bits (585), Expect = 6.27e-74
Identity = 123/176 (69.89%), Postives = 143/176 (81.25%), Query Frame = 0

Query: 1   MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQ-ALSFKCNN 60
           MA GEL+R+F+EL D+NEKQE++V Y++ KVQNIVFGYLI+ RLF +GISQ + SF C +
Sbjct: 1   MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60

Query: 61  WWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-V 120
           WWVILALSLL +FIYFLLFLDA+ ML R QYQLDIICKEL E  QQ L+ KN+DD+ L +
Sbjct: 61  WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120

Query: 121 EAGESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK 174
           E GES  GFEFGFH+KMLMLDH  IVGR VYIYF V ALLAV AIELY  KY+LC 
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176

BLAST of Csor.00g010540 vs. NCBI nr
Match: XP_022157176.1 (uncharacterized protein LOC111023953 isoform X2 [Momordica charantia])

HSP 1 Score: 223 bits (569), Expect = 1.65e-71
Identity = 115/175 (65.71%), Postives = 140/175 (80.00%), Query Frame = 0

Query: 1   MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSFKCNNW 60
           MA GEL+R+F EL D+NEKQE++V YH+ K Q IV GYLI  RLF +GISQ  S KC++W
Sbjct: 1   MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDW 60

Query: 61  WVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-VE 120
           WVIL+LSLL +F+YFLLFLDA T L++ + QLD+ICKELIE CQQ L+ +N+DD+DL +E
Sbjct: 61  WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAME 120

Query: 121 AGESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK 174
            G+  DGFEFGFH+KML+LDH   VGR VYIYF VCAL+AV AIELY  KYLLC 
Sbjct: 121 GGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175

BLAST of Csor.00g010540 vs. NCBI nr
Match: KAA0042579.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05983.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (476), Expect = 9.03e-57
Identity = 101/174 (58.05%), Postives = 126/174 (72.41%), Query Frame = 0

Query: 4   GELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSFKCNNWWVI 63
           G+L+R F  L D+N+ QET + Y + K+QN+V GYL W RLF +G+S   SFKC +WWVI
Sbjct: 48  GDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVS--FSFKCKDWWVI 107

Query: 64  LALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-VEAGE 123
           LAL+L + F YFLLF+DA+ ML R   QLDII KEL E CQQ L+ +N+D++ L +EAGE
Sbjct: 108 LALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEAGE 167

Query: 124 SRDGFEFGFHKKMLMLDHSTIV--GRNVYIYFIVCALLAVAAIELYAYKYLLCK 174
             DGFE  FH++M MLD   +V  GR VYIYFIVC LLA+ AIELYA K LLC 
Sbjct: 168 DSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219

BLAST of Csor.00g010540 vs. ExPASy TrEMBL
Match: A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)

HSP 1 Score: 229 bits (585), Expect = 3.04e-74
Identity = 123/176 (69.89%), Postives = 143/176 (81.25%), Query Frame = 0

Query: 1   MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQ-ALSFKCNN 60
           MA GEL+R+F+EL D+NEKQE++V Y++ KVQNIVFGYLI+ RLF +GISQ + SF C +
Sbjct: 1   MALGELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQTSSSFNCKD 60

Query: 61  WWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-V 120
           WWVILALSLL +FIYFLLFLDA+ ML R QYQLDIICKEL E  QQ L+ KN+DD+ L +
Sbjct: 61  WWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSM 120

Query: 121 EAGESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK 174
           E GES  GFEFGFH+KMLMLDH  IVGR VYIYF V ALLAV AIELY  KY+LC 
Sbjct: 121 ETGESSGGFEFGFHEKMLMLDHFRIVGRKVYIYFTVSALLAVTAIELYVSKYVLCN 176

BLAST of Csor.00g010540 vs. ExPASy TrEMBL
Match: A0A6J1DX74 (uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023953 PE=4 SV=1)

HSP 1 Score: 223 bits (569), Expect = 7.99e-72
Identity = 115/175 (65.71%), Postives = 140/175 (80.00%), Query Frame = 0

Query: 1   MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSFKCNNW 60
           MA GEL+R+F EL D+NEKQE++V YH+ K Q IV GYLI  RLF +GISQ  S KC++W
Sbjct: 1   MAVGELRRKFGELKDINEKQESRVRYHEAKFQKIVSGYLILTRLFFFGISQTSSSKCHDW 60

Query: 61  WVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-VE 120
           WVIL+LSLL +F+YFLLFLDA T L++ + QLD+ICKELIE CQQ L+ +N+DD+DL +E
Sbjct: 61  WVILSLSLLCSFVYFLLFLDAATRLYQTKGQLDMICKELIEVCQQILVAQNQDDVDLAME 120

Query: 121 AGESRDGFEFGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK 174
            G+  DGFEFGFH+KML+LDH   VGR VYIYF VCAL+AV AIELY  KYLLC 
Sbjct: 121 GGDFSDGFEFGFHEKMLVLDHFRFVGRKVYIYFTVCALVAVTAIELYVSKYLLCN 175

BLAST of Csor.00g010540 vs. ExPASy TrEMBL
Match: A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)

HSP 1 Score: 187 bits (476), Expect = 4.37e-57
Identity = 101/174 (58.05%), Postives = 126/174 (72.41%), Query Frame = 0

Query: 4   GELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQALSFKCNNWWVI 63
           G+L+R F  L D+N+ QET + Y + K+QN+V GYL W RLF +G+S   SFKC +WWVI
Sbjct: 48  GDLRRNFVLLKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVS--FSFKCKDWWVI 107

Query: 64  LALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDMDL-VEAGE 123
           LAL+L + F YFLLF+DA+ ML R   QLDII KEL E CQQ L+ +N+D++ L +EAGE
Sbjct: 108 LALTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQILVAQNQDNVGLSMEAGE 167

Query: 124 SRDGFEFGFHKKMLMLDHSTIV--GRNVYIYFIVCALLAVAAIELYAYKYLLCK 174
             DGFE  FH++M MLD   +V  GR VYIYFIVC LLA+ AIELYA K LLC 
Sbjct: 168 DSDGFELSFHERMFMLDQFRVVETGRKVYIYFIVCPLLAITAIELYACKCLLCN 219

BLAST of Csor.00g010540 vs. ExPASy TrEMBL
Match: A0A5A7TLI0 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00770 PE=4 SV=1)

HSP 1 Score: 184 bits (468), Expect = 2.17e-56
Identity = 106/181 (58.56%), Postives = 133/181 (73.48%), Query Frame = 0

Query: 1   MAHGELKRRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQ-ALSFKCNN 60
           MA G+L R F+E+  + ++QE KVCYH+NKVQN+V GYL++ RL I+G +Q +L FKC +
Sbjct: 1   MASGDL-RSFEEVTVIYKEQEEKVCYHENKVQNLVIGYLVFGRLLIFGFTQTSLPFKCKD 60

Query: 61  WWVILALSLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKN-RDDMDL- 120
           WWVILAL+L    +YF L LDA+TML R +Y+LDII KELIE CQ+ L+ +N RD +DL 
Sbjct: 61  WWVILALTLSCTLVYFSLLLDAVTMLCRTEYELDIIRKELIEICQRILVSQNQRDLVDLT 120

Query: 121 ---VEAGESRDGFEFGF--HKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLL 173
              +EA ES DGF+FGF  H+KMLMLDH   V R V+IYF V ALL V  IELY  KYLL
Sbjct: 121 QLTMEAEESSDGFDFGFGFHQKMLMLDHFRTVRRKVHIYFTVSALLVVVVIELYVSKYLL 180

BLAST of Csor.00g010540 vs. ExPASy TrEMBL
Match: A0A0A0KND2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139800 PE=4 SV=1)

HSP 1 Score: 183 bits (465), Expect = 6.20e-56
Identity = 104/175 (59.43%), Postives = 130/175 (74.29%), Query Frame = 0

Query: 8   RRFKELIDVNEKQETKVCYHKNKVQNIVFGYLIWVRLFIYGISQA-LSFKCNNWWVILAL 67
           R F+EL  + ++QE +VC+H +KVQN+V GYLI+ RL I+GI+Q  L FKC +WWVILAL
Sbjct: 7   RSFQELKVIYKEQEERVCHHDSKVQNLVIGYLIFGRLLIFGIAQTFLPFKCKDWWVILAL 66

Query: 68  SLLWNFIYFLLFLDAMTMLHRAQYQLDIICKELIEFCQQNLIPKNRDDM-DL----VEAG 127
           +L    IYF L LDA+TML RAQYQLDII +ELIE CQ+ L  +N+ ++ DL    +EAG
Sbjct: 67  TLSCTLIYFSLLLDAVTMLRRAQYQLDIIREELIEICQRILETQNQKELVDLTQLTMEAG 126

Query: 128 ESRDGFE--FGFHKKMLMLDHSTIVGRNVYIYFIVCALLAVAAIELYAYKYLLCK 174
           ES DGF+  FGFHKKMLMLDHS+IV R V++YF V  LL V  IELY  KYL+C 
Sbjct: 127 ESNDGFDYNFGFHKKMLMLDHSSIVRRKVHMYFTVSVLLVVIVIELYVSKYLVCN 181

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6579338.15.87e-122100.00hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7016840.11.85e-11797.70hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022157182.16.27e-7469.89uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... [more]
XP_022157176.11.65e-7165.71uncharacterized protein LOC111023953 isoform X2 [Momordica charantia][more]
KAA0042579.19.03e-5758.05WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... [more]
Match NameE-valueIdentityDescription
A0A6J1DSQ03.04e-7469.89uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DX747.99e-7265.71uncharacterized protein LOC111023953 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A5A7TMJ14.37e-5758.05WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5A7TLI02.17e-5658.56WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... [more]
A0A0A0KND26.20e-5659.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139800 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33287:SF8SUBFAMILY NOT NAMEDcoord: 3..174
NoneNo IPR availablePANTHERPTHR33287OS03G0453550 PROTEINcoord: 3..174

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g010540.m01Csor.00g010540.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane