Csor.00g009720 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g009720
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Coiled-coil domain-containing protein SCD2
Location	Csor_Chr08: 118719 .. 120530 (+)
RNA-Seq Expression	Csor.00g009720
Synteny	Csor.00g009720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGGTTCTTCTCGGTGCGGCAAATCCAAACTCAATGCGACTCTTCCCACTCAATCATGCTTGTTTCAGGGCCTCCTTCCTGGTACTGCCCCATATCCCTCTCTCGCTTCTTCTTCATTTCGTTGAATTCATTCTAGTTTCCCTCAAAATTTTGCAGCGGAAAGACTTCCTTGCTTTTTCAGTTTGCTTTTAATTTGGGTTTGGAGGGAAATGTTGCCTTCATCTGCAACCGCCGCAAATTAGAGAATAAACCTCCATATCTCTCGCAGGCATCTCTCTCCTTGTTTCTGTCTGTGTGTGTTGTGGTCATATTGAATAGAATGTTGCATATTTGCTGAAACTTAGAACCCTTTGGGCCTAACATCCAGGGAGTTGATCCAGCATCCGAAACCTTTCAGCGCATACAAATGAAGTCGGTGGTCATTCCATTCTTTATCCTAATTAAATGACGATCGTCCTTCACTTGCTTTACTTGAACGTGTGAATTCTCTAATTCTGACTTCAGGTATTTGGAGGACGACGAGGGAATTAACAAGTACTTCTCTGCATTTCACCTGCATCGTACACTTCCCGTGGCAGTTGTTATTGACGATTTTGGAGATTTTTTCGAGGAAAGGTCTTCATATTTTCCCATGTTTTTTTTTATCTTTCCAACTTCTATCCACTGGTACTCTGTGCATTACTATGTATTTCTGTAGGTTTTTATTCCCTTTTTCATTTCACCTTCTCTTTGTAAGGCGATGTCAGGAAAAATATGCCAATCCTCGCGGAAGAGACCTAGCAATGGTTAGAACACTAGCACTTTGTCATAATGCCATGAGCCTAGCGAAGTGGGTTTGCATCTCTCAGAACTTCCAATGAATAAATTACTCTCCTAGATGACACCCTCTTCTTTGCTGCTTCTAACTTGAAAGATTTTTCAGTCAGTGTAGGCCTTGCCAGCTTGTGTTGTCTGATACCCACCACGGAGAGTCCCCAAGGTTGATATTCATTTATAAGAGATGGGTTCCAACCATTTTCACCATTAGAGGTTAGTTTAAGCTGAGTGACTGCTCAACCCAAATTCAAAGCAGTTGACCCCATTTTTTGTTATTTGTGTATTGCATGGCAATTTCAGAAAATACAAATGATAAGTGGTGCAAAGTGATTGTGTTGTCTTCTTGATGGTGGTTAACTGATATGCCCTTTTGGCCACCTGTATTGAACTATTTATGTTTATGTTGAAGGTGATGGGTCTGGATGGTTCATCCTGAGAAGTATTAACAATTGTGGAAATGACTGTTGTTTGAGGACTAAAAGTGCAAAATACTCGATTGCTCTTCAGTTCCTGAGTTTGGAGGAAGTTTCTGAAGACATTACAGAATAATGGATTTCCTTGCAGCTTGAGTACTTCATCATTTGTAAGTCTGTAGGTTGACCTATTCTTTTTAGGAATTATACGCTGATATATTAGTATTTGTTTATGAAGAACAATCTTCTGATATTAGTATCATTATTATATAAACTTGGTGTCTGTTCAACTTTTATGATGGGTGGTTAATTGTTGCCTGTATAATCTTACTAATCAATCAAGTTTTTCCATCATCTCAATTTTGAAACAGCATGAAATTCTTTCAGTTTTCTCACTAAACCAGCAAGCAGTTTTGAGTATTGTTTATGGTAGATTATTGCCTTTCAGCTCCCTGTATTTATCTGAGAAGAGGTGGTCTTATGTTCTTTCAGAATATCTAACTCTGTTTTCTACTAATCATTCACAAGCACAGGGGAAAGCCAGCAGAAAAGAAAAGAACAGAAAAGAAAACAACTGA

mRNA sequence

ATGGAAAGGTTCTTCTCGGTGCGGCAAATCCAAACTCAATGCGACTCTTCCCACTCAATCATGCTTGTTTCAGGGCCTCCTTCCTGCGGAAAGACTTCCTTGCTTTTTCAGTTTGCTTTTAATTTGGGTTTGGAGGGAAATGTTGCCTTCATCTGCAACCGCCGCAAATTAGAGAATAAACCTCCATATCTCTCGCAGGGAGTTGATCCAGCATCCGAAACCTTTCAGCGCATACAAATGAAGTATTTGGAGGACGACGAGGGAATTAACAAGTACTTCTCTGCATTTCACCTGCATCGTACACTTCCCGTGGCAGTTGTTATTGACGATTTTGGAGATTTTTTCGAGGAAAGGCGATGTCAGGAAAAATATGCCAATCCTCGCGGAAGAGACCTAGCAATGGTTAGAACACTAGCACTTTGTCATAATGCCATGAGCCTAGCGAATCAGTGTAGGCCTTGCCAGCTTGTGTTGTCTGATACCCACCACGGAGAGTCCCCAAGGTTGATATTCATTTATAAGAGATGGGTTCCAACCATTTTCACCATTAGAGGTGATGGGTCTGGATGCTTGAGTACTTCATCATTTGGGAAAGCCAGCAGAAAAGAAAAGAACAGAAAAGAAAACAACTGA

Coding sequence (CDS)

ATGGAAAGGTTCTTCTCGGTGCGGCAAATCCAAACTCAATGCGACTCTTCCCACTCAATCATGCTTGTTTCAGGGCCTCCTTCCTGCGGAAAGACTTCCTTGCTTTTTCAGTTTGCTTTTAATTTGGGTTTGGAGGGAAATGTTGCCTTCATCTGCAACCGCCGCAAATTAGAGAATAAACCTCCATATCTCTCGCAGGGAGTTGATCCAGCATCCGAAACCTTTCAGCGCATACAAATGAAGTATTTGGAGGACGACGAGGGAATTAACAAGTACTTCTCTGCATTTCACCTGCATCGTACACTTCCCGTGGCAGTTGTTATTGACGATTTTGGAGATTTTTTCGAGGAAAGGCGATGTCAGGAAAAATATGCCAATCCTCGCGGAAGAGACCTAGCAATGGTTAGAACACTAGCACTTTGTCATAATGCCATGAGCCTAGCGAATCAGTGTAGGCCTTGCCAGCTTGTGTTGTCTGATACCCACCACGGAGAGTCCCCAAGGTTGATATTCATTTATAAGAGATGGGTTCCAACCATTTTCACCATTAGAGGTGATGGGTCTGGATGCTTGAGTACTTCATCATTTGGGAAAGCCAGCAGAAAAGAAAAGAACAGAAAAGAAAACAACTGA

Protein sequence

MERFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGSGCLSTSSFGKASRKEKNRKENN

Homology

[Close]

BLAST of Csor.00g009720 vs. NCBI nr
Match: KAG6592822.1 (hypothetical protein SDJN03_12298, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 437 bits (1123), Expect = 9.07e-155
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MERFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENK 60
           MERFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENK
Sbjct: 1   MERFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENK 60

Query: 61  PPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           QEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGSGCLSTSSFGKASRKEKNRKENN 210
           FTIRGDGSGCLSTSSFGKASRKEKNRKENN
Sbjct: 181 FTIRGDGSGCLSTSSFGKASRKEKNRKENN 210

[Close]

BLAST of Csor.00g009720 vs. NCBI nr
Match: XP_022959968.1 (uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_022959970.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_022959971.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata])

HSP 1 Score: 392 bits (1008), Expect = 7.08e-137
Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 3   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENKPP 62
           RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNV FICNRRKLENKPP
Sbjct: 6   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 65

Query: 63  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 122
           YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE
Sbjct: 66  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 125

Query: 123 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 182
           KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT
Sbjct: 126 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 185

Query: 183 IRGDGSG 189
           IRGDGSG
Sbjct: 186 IRGDGSG 192

[Close]

BLAST of Csor.00g009720 vs. NCBI nr
Match: XP_023005109.1 (uncharacterized protein LOC111498201 isoform X1 [Cucurbita maxima] >XP_023005110.1 uncharacterized protein LOC111498201 isoform X1 [Cucurbita maxima])

HSP 1 Score: 390 bits (1001), Expect = 7.42e-136
Identity = 186/191 (97.38%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 1   MERFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENK 60
           MERFFSVRQIQTQCD SHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNV FICNRRKLENK
Sbjct: 1   MERFFSVRQIQTQCDPSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPASETFQRIQMKYLED+EGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPASETFQRIQMKYLEDNEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           QEKYANPRGRDLAMVRTLAL HNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QEKYANPRGRDLAMVRTLALSHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGSGCL 191
           FTIRGDGSG L
Sbjct: 181 FTIRGDGSGWL 191

[Close]

BLAST of Csor.00g009720 vs. NCBI nr
Match: XP_023514984.1 (uncharacterized protein LOC111779141 [Cucurbita pepo subsp. pepo] >XP_023514985.1 uncharacterized protein LOC111779141 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382 bits (982), Expect = 5.24e-133
Identity = 184/189 (97.35%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MERFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENK 60
           MERFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNV FICNRRKLENK
Sbjct: 1   MERFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           QEKYANPRGRDLAMVRTLALCHNAMSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QEKYANPRGRDLAMVRTLALCHNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGSG 189
           FTIRGDGSG
Sbjct: 181 FTIRGDGSG 186

[Close]

BLAST of Csor.00g009720 vs. NCBI nr
Match: XP_022959972.1 (uncharacterized protein LOC111460863 isoform X2 [Cucurbita moschata])

HSP 1 Score: 379 bits (972), Expect = 1.95e-131
Identity = 182/187 (97.33%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 3   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENKPP 62
           RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNV FICNRRKLENKPP
Sbjct: 6   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 65

Query: 63  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 122
           YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE
Sbjct: 66  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 125

Query: 123 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 182
           KYANPRGRDLAMVRTLALCHNAMSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFT
Sbjct: 126 KYANPRGRDLAMVRTLALCHNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 185

Query: 183 IRGDGSG 189
           IRGDGSG
Sbjct: 186 IRGDGSG 189

[Close]

BLAST of Csor.00g009720 vs. ExPASy TrEMBL
Match: A0A6J1H6C8 (uncharacterized protein LOC111460863 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460863 PE=4 SV=1)

HSP 1 Score: 392 bits (1008), Expect = 3.43e-137
Identity = 186/187 (99.47%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 3   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENKPP 62
           RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNV FICNRRKLENKPP
Sbjct: 6   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 65

Query: 63  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 122
           YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE
Sbjct: 66  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 125

Query: 123 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 182
           KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT
Sbjct: 126 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 185

Query: 183 IRGDGSG 189
           IRGDGSG
Sbjct: 186 IRGDGSG 192

[Close]

BLAST of Csor.00g009720 vs. ExPASy TrEMBL
Match: A0A6J1KWJ2 (uncharacterized protein LOC111498201 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498201 PE=4 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 3.59e-136
Identity = 186/191 (97.38%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 1   MERFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENK 60
           MERFFSVRQIQTQCD SHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNV FICNRRKLENK
Sbjct: 1   MERFFSVRQIQTQCDPSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPASETFQRIQMKYLED+EGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPASETFQRIQMKYLEDNEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           QEKYANPRGRDLAMVRTLAL HNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QEKYANPRGRDLAMVRTLALSHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGSGCL 191
           FTIRGDGSG L
Sbjct: 181 FTIRGDGSGWL 191

[Close]

BLAST of Csor.00g009720 vs. ExPASy TrEMBL
Match: A0A6J1H622 (uncharacterized protein LOC111460863 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460863 PE=4 SV=1)

HSP 1 Score: 379 bits (972), Expect = 9.43e-132
Identity = 182/187 (97.33%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 3   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENKPP 62
           RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNV FICNRRKLENKPP
Sbjct: 6   RFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPP 65

Query: 63  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 122
           YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE
Sbjct: 66  YLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQE 125

Query: 123 KYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 182
           KYANPRGRDLAMVRTLALCHNAMSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTIFT
Sbjct: 126 KYANPRGRDLAMVRTLALCHNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTIFT 185

Query: 183 IRGDGSG 189
           IRGDGSG
Sbjct: 186 IRGDGSG 189

[Close]

BLAST of Csor.00g009720 vs. ExPASy TrEMBL
Match: A0A6J1KU11 (uncharacterized protein LOC111498201 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498201 PE=4 SV=1)

HSP 1 Score: 376 bits (965), Expect = 9.89e-131
Identity = 182/191 (95.29%), Postives = 184/191 (96.34%), Query Frame = 0


Query: 1   MERFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENK 60
           MERFFSVRQIQTQCD SHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNV FICNRRKLENK
Sbjct: 1   MERFFSVRQIQTQCDPSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDPASETFQRIQMKYLED+EGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPASETFQRIQMKYLEDNEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           QEKYANPRGRDLAMVRTLAL HNAMSLA   +PCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QEKYANPRGRDLAMVRTLALSHNAMSLA---KPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGSGCL 191
           FTIRGDGSG L
Sbjct: 181 FTIRGDGSGWL 188

[Close]

BLAST of Csor.00g009720 vs. ExPASy TrEMBL
Match: A0A0A0K9H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091880 PE=4 SV=1)

HSP 1 Score: 373 bits (957), Expect = 1.89e-129
Identity = 175/189 (92.59%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MERFFSVRQIQTQCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLEGNVAFICNRRKLENK 60
           ME+FFSV+QI T C+SSHSI LVSGPPSCGKTSLLFQFAFNLGLEGNV FICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 61  PPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRTLPVAVVIDDFGDFFEERRC 120
           PPYLSQGVDP SETFQRIQMKYLEDD+GI KYFSAFHLH TLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 121 QEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180
           QEKYANPRGRDLAMVRTLALC NA+SLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 181 FTIRGDGSG 189
           FTIRGDG+G
Sbjct: 181 FTIRGDGAG 189

[Close]

BLAST of Csor.00g009720 vs. TAIR 10
Match: AT3G23255.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. )

HSP 1 Score: 225.3 bits (573), Expect = 4.5e-59
Identity = 113/212 (53.30%), Postives = 149/212 (70.28%), Query Frame = 0


Query: 1   MERFFSVRQIQTQCDSSH---SIMLVSGPPSCGKTSLLFQFAFNLGLEG---NVAFICNR 60
           +ERFF  +  ++  D +H   ++ L+SGP S GKTSLLFQ A N+        V FIC+R
Sbjct: 2   VERFFPTK--RSSGDENHRRGNLSLLSGPISSGKTSLLFQLALNVASASTTTRVVFICHR 61

Query: 61  RKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRT--LPVAVVIDDFG 120
           +K+E+ PP+LSQG+DP+S+ F RIQ+KY++DDEGI KYF+AFHLH    LP AV+IDDFG
Sbjct: 62  KKIESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDFG 121

Query: 121 DFFEERRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFI 180
           D+F +        N R RD+AMVRTLALCHNA+  AN+   C+LVLS+T+HG+SPR +FI
Sbjct: 122 DYFSK---LNSVMNSRARDMAMVRTLALCHNAIVDANRKALCELVLSETNHGDSPRSLFI 181

Query: 181 YKRWVPTIFTIRGDGSGCLSTSSFGKASRKEK 205
           YKRW+P IFTI+G G G    +S   + R  K
Sbjct: 182 YKRWIPKIFTIKGHGDGSFLLTSNDTSERSAK 208

[Close]

BLAST of Csor.00g009720 vs. TAIR 10
Match: AT3G23255.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 52 Blast hits to 52 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-57
Identity = 112/212 (52.83%), Postives = 148/212 (69.81%), Query Frame = 0


Query: 1   MERFFSVRQIQTQCDSSH---SIMLVSGPPSCGKTSLLFQFAFNLGLEG---NVAFICNR 60
           +ERFF  +  ++  D +H   ++ L+SGP S GKTSLLFQ A N+        V FIC+R
Sbjct: 2   VERFFPTK--RSSGDENHRRGNLSLLSGPISSGKTSLLFQLALNVASASTTTRVVFICHR 61

Query: 61  RKLENKPPYLSQGVDPASETFQRIQMKYLEDDEGINKYFSAFHLHRT--LPVAVVIDDFG 120
           +K+E+ PP+LSQG+DP+S+ F RIQ+KY++DDEGI KYF+AFHLH    LP AV+IDDFG
Sbjct: 62  KKIESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDFG 121

Query: 121 DFFEERRCQEKYANPRGRDLAMVRTLALCHNAMSLANQCRPCQLVLSDTHHGESPRLIFI 180
           D+F +        N R RD+AMVRTLALCHNA+  A +   C+LVLS+T+HG+SPR +FI
Sbjct: 122 DYFSK---LNSVMNSRARDMAMVRTLALCHNAIVDAKKAL-CELVLSETNHGDSPRSLFI 181

Query: 181 YKRWVPTIFTIRGDGSGCLSTSSFGKASRKEK 205
           YKRW+P IFTI+G G G    +S   + R  K
Sbjct: 182 YKRWIPKIFTIKGHGDGSFLLTSNDTSERSAK 207

The following BLAST results are available for this feature:

BLAST of Csor.00g009720 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g009720 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6592822.1	9.07e-155	100.00	hypothetical protein SDJN03_12298, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022959968.1	7.08e-137	99.47	uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata] >XP_0229599...	[more]
XP_023005109.1	7.42e-136	97.38	uncharacterized protein LOC111498201 isoform X1 [Cucurbita maxima] >XP_023005110...	[more]
XP_023514984.1	5.24e-133	97.35	uncharacterized protein LOC111779141 [Cucurbita pepo subsp. pepo] >XP_023514985....	[more]
XP_022959972.1	1.95e-131	97.33	uncharacterized protein LOC111460863 isoform X2 [Cucurbita moschata]	[more]

BLAST of Csor.00g009720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6C8	3.43e-137	99.47	uncharacterized protein LOC111460863 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KWJ2	3.59e-136	97.38	uncharacterized protein LOC111498201 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H622	9.43e-132	97.33	uncharacterized protein LOC111460863 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KU11	9.89e-131	95.29	uncharacterized protein LOC111498201 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0K9H1	1.89e-129	92.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091880 PE=4 SV=1	[more]

BLAST of Csor.00g009720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23255.2	4.5e-59	53.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G23255.1	1.4e-57	52.83	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 16..188 e-value: 2.3E-7 score: 32.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 19..135
None	No IPR available	PANTHER	PTHR28653	FAMILY NOT NAMED	coord: 1..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g009720.m01	Csor.00g009720.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation