Csor.00g009680 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g009680
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr08: 131450 .. 131737 (-)
RNA-Seq ExpressionCsor.00g009680
SyntenyCsor.00g009680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTGGTGGTCGAGGCAGGCAGGCATTGCAGAAGGTTGGGTCGAAAGCTGTATGTCCCTCCAGAGCTGGAAGGGGAAGCGCAGGAGGAGGAAGAATTGAAGGAATTCCCTGGCGAGATTGGGAGGCCTCGCCTGAGAAAAGAGAGAGAATTGGGTTTCTGTTTTGGTTTTGTTGTTTGTTGTTTGTTGTTTGTTGTTTGTTGTTTGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGGTTAGAAAGAAGTTGGGTGGGGGGGTGA

mRNA sequence

ATGGTGTTGGTGGTCGAGGCAGGCAGGCATTGCAGAAGGTTGGGTCGAAAGCTGTATGTCCCTCCAGAGCTGGAAGGGGAAGCGCAGGAGGAGGAAGAATTGAAGGAATTCCCTGGCGAGATTGGGAGGCCTCGCCTGAGAAAAGAGAGAGAATTGGGTTTCTGTTTTGGTTTTGTTGTTTGTTGTTTGTTGTTTGTTGTTTGTTGTTTGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGGTTAGAAAGAAGTTGGGTGGGGGGGTGA

Coding sequence (CDS)

ATGGTGTTGGTGGTCGAGGCAGGCAGGCATTGCAGAAGGTTGGGTCGAAAGCTGTATGTCCCTCCAGAGCTGGAAGGGGAAGCGCAGGAGGAGGAAGAATTGAAGGAATTCCCTGGCGAGATTGGGAGGCCTCGCCTGAGAAAAGAGAGAGAATTGGGTTTCTGTTTTGGTTTTGTTGTTTGTTGTTTGTTGTTTGTTGTTTGTTGTTTGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATGGTTAGAAAGAAGTTGGGTGGGGGGGTGA

Protein sequence

MVLVVEAGRHCRRLGRKLYVPPELEGEAQEEEELKEFPGEIGRPRLRKERELGFCFGFVVCCLLFVVCCLLKKKKKKKKKKKKKKKWLERSWVGG
Homology
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BLAST of Csor.00g009680 vs. NCBI nr
Match: KAG6592826.1 (hypothetical protein SDJN03_12302, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 190 bits (482), Expect = 9.26e-61
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MVLVVEAGRHCRRLGRKLYVPPELEGEAQEEEELKEFPGEIGRPRLRKERELGFCFGFVV 60
          MVLVVEAGRHCRRLGRKLYVPPELEGEAQEEEELKEFPGEIGRPRLRKERELGFCFGFVV
Sbjct: 1  MVLVVEAGRHCRRLGRKLYVPPELEGEAQEEEELKEFPGEIGRPRLRKERELGFCFGFVV 60

Query: 61 CCLLFVVCCLLKKKKKKKKKKKKKKKWLERSWVGG 95
          CCLLFVVCCLLKKKKKKKKKKKKKKKWLERSWVGG
Sbjct: 61 CCLLFVVCCLLKKKKKKKKKKKKKKKWLERSWVGG 95

The following BLAST results are available for this feature:
BLAST of Csor.00g009680 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g009680 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6592826.19.26e-61100.00hypothetical protein SDJN03_12302, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g009680 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g009680 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g009680.m01Csor.00g009680.m01mRNA