Csor.00g009650 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTCAGACCCTCTCTCACCGTGAGCCACGCCGCTTCAACCCCTTCTTTCGTCTCCTGCTTTTTGTAGGAGCATTATTCATTAATATCTGACTACCGCTGATAACGATATTGTGATGCATGCAGTCTGCGTGGAAATCAATGCTTAGGACCCAAGGGAAGCGTCGGTTAGCGTCGTCCAGCACCGCTTCCACCATTGAAAATGCTGCTACGACTTCTACGTTAATAAGCAAACCCACTATTATTGAATAGTTATAATATGTTGTGCTTGCTAATGAATGGTTGATTGTGGAACACAGGGGCAGTCCGAGTAGGAGCGAGTACATGAAGGGTGAGTACGCCCCAGTCTACATTGTGTTGGGGTTCGTAGGGATTGTTTTGATGATGGGAACCCACACGGCGAAGCAGCAGCTGCTGCATTCCCCGGTGGTCAATGTGAGCAAGAAGAAGAGGGAGAGCATCCCGGAGGTGGAGGAGCCCGACACCGTCATCAATTCCGCCGACAAGTTTATCAACAAATCCATTCTTAGGAAGGTGGCCCACATCCAGGACAACACCAAGACTGTGTAGTACGGGATCCCTTTTACCAGCTCACTTCAAGTTTACAATATTTATGTTGTTTAGTATAGTATGCCCTTTGGTTTCAGGCCCCCTAA ATGGCTTTCAGACCCTCTCTCACCTCTGCGTGGAAATCAATGCTTAGGACCCAAGGGAAGCGTCGGTTAGCGTCGTCCAGCACCGCTTCCACCATTGAAAATGCTGCTACGACTTCTACGGGCAGTCCGAGTAGGAGCGAGTACATGAAGGGTGAGTACGCCCCAGTCTACATTGTGTTGGGGTTCGTAGGGATTGTTTTGATGATGGGAACCCACACGGCGAAGCAGCAGCTGCTGCATTCCCCGGTGGTCAATGAAGGTGGCCCACATCCAGGACAACACCAAGACTGTGTAGCCCCCTAA ATGGCTTTCAGACCCTCTCTCACCTCTGCGTGGAAATCAATGCTTAGGACCCAAGGGAAGCGTCGGTTAGCGTCGTCCAGCACCGCTTCCACCATTGAAAATGCTGCTACGACTTCTACGGGCAGTCCGAGTAGGAGCGAGTACATGAAGGGTGAGTACGCCCCAGTCTACATTGTGTTGGGGTTCGTAGGGATTGTTTTGATGATGGGAACCCACACGGCGAAGCAGCAGCTGCTGCATTCCCCGGTGGTCAATGAAGGTGGCCCACATCCAGGACAACACCAAGACTGTGTAGCCCCCTAA MAFRPSLTSAWKSMLRTQGKRRLASSSTASTIENAATTSTGSPSRSEYMKGEYAPVYIVLGFVGIVLMMGTHTAKQQLLHSPVVNEGGPHPGQHQDCVAP Homology
BLAST of Csor.00g009650 vs. NCBI nr
Match: KAG6592829.1 (hypothetical protein SDJN03_12305, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 196 bits (498), Expect = 4.82e-63 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Csor.00g009650 vs. NCBI nr
Match: KAG7025237.1 (hypothetical protein SDJN02_11732 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 161 bits (407), Expect = 9.07e-49 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of Csor.00g009650 vs. NCBI nr
Match: XP_023513989.1 (uncharacterized protein LOC111778418 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 157 bits (397), Expect = 3.03e-47 Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of Csor.00g009650 vs. NCBI nr
Match: XP_023004241.1 (uncharacterized protein LOC111497635 [Cucurbita maxima]) HSP 1 Score: 152 bits (383), Expect = 4.11e-45 Identity = 80/85 (94.12%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of Csor.00g009650 vs. NCBI nr
Match: XP_022960397.1 (uncharacterized protein LOC111461134 [Cucurbita moschata]) HSP 1 Score: 142 bits (359), Expect = 1.54e-41 Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of Csor.00g009650 vs. ExPASy TrEMBL
Match: A0A6J1KRK6 (uncharacterized protein LOC111497635 OS=Cucurbita maxima OX=3661 GN=LOC111497635 PE=4 SV=1) HSP 1 Score: 152 bits (383), Expect = 1.99e-45 Identity = 80/85 (94.12%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of Csor.00g009650 vs. ExPASy TrEMBL
Match: A0A6J1H7A1 (uncharacterized protein LOC111461134 OS=Cucurbita moschata OX=3662 GN=LOC111461134 PE=4 SV=1) HSP 1 Score: 142 bits (359), Expect = 7.46e-42 Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of Csor.00g009650 vs. ExPASy TrEMBL
Match: A0A1S3CBE5 (uncharacterized protein LOC103498899 OS=Cucumis melo OX=3656 GN=LOC103498899 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.33e-19 Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of Csor.00g009650 vs. ExPASy TrEMBL
Match: A0A0A0KC39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091280 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.50e-19 Identity = 53/93 (56.99%), Postives = 67/93 (72.04%), Query Frame = 0
BLAST of Csor.00g009650 vs. ExPASy TrEMBL
Match: A0A6J1D5L1 (uncharacterized protein LOC111017496 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017496 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.32e-18 Identity = 52/89 (58.43%), Postives = 62/89 (69.66%), Query Frame = 0
BLAST of Csor.00g009650 vs. TAIR 10
Match: AT1G63060.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 4.0e-05 Identity = 31/85 (36.47%), Postives = 48/85 (56.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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