Csor.00g009530 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g009530
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionpre-mRNA-processing factor 39-like
LocationCsor_Chr08: 203037 .. 212517 (+)
RNA-Seq ExpressionCsor.00g009530
SyntenyCsor.00g009530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGGGAAAACGGTAATCTCCATCGCCCTTCTGCCCTCGACTCCTCAAAAATCAAGCAGAGGGAGTCTCAGCTCCTTTTCTCTCGAATTCTCAATTAGCTTCGCATTTCAAGGGCACACCCATTTGTTTTTTTCTTCCATCAACTTCCACTCCTCTCTCCACTCCACACCCTCGTCTTCTTCTTCCTTTCGGTAAGTTCTTCTGCTTCCTCTTGTACAACTGCTCCTCGATTGGATGTTCTGGAAGTTTCATCTTTTTCTATGGCTATTATGTTTGTTGGTCATGTTACTGCTCTGTTATGTTCGCAACTGATTGTATGTTATGCTATGCTCTTCTGCGCCATTAATTTTTTTGTTTTATCGTTAAATTTCCATGTCTTCTTTGTTTTTGGGTTTGATTCAAACTAATGTACATACCAGAGTTGATGCTTCTGAAGTAAAGGGGCTGCTGTTTAATTCAAGCACATTGTCTTTTGTTTTTCTGGGTTTAGGATTCTAGCTCAATTTTTGAAGGCCACCTCCTTCTTCTTTGTCTTTTGTTCTATGCGATAGTTGTTTAAATGCATGCAGTTAGGCTAGCAAAGAATTATTTTTGTAGTTTAAGCATGGGGGACAGTGAAACTATAGTTGCCCAAACATCTGAATTTATGAGGTATACATATGCTGGCTATGTTTCGAGTGGCTATGCTGATAGCAGTACAAATCTAATTCCTCATCCCGGCGTTTTTCTATCTGTGATCACTGGAGACTTTAAAGATACACCTATGTATGCAGATATGAGTGATGGCAATGCGTATGTTACGGATCCCAATTCTATTCAGCAAGGAAATCATGTTGGTGAGGTAGATGAGGCGATGGTATCTGTAGGAGTGACTGACCATAGTCAGAATAATGCTGTATCAGAAAATTCAGCAATGGAAACTGCTGAAGTAGTCAGTCATGATTCTTCTTTAAATGGAAGTGTTGCAGCCGTATCGGACAATGCCTTTTCTGTTGAGAACGGGAATGCTGTTGAGAATACCAACGAGGCTTCTGAGGAACAACACTTTGTTGATGGTTCTGGTATGTGTCTCTCGTTTTTCGTTTCCTGCATTTCATGAGAATTTCATTTGGCAATAAGCATTTTAACGAATGGGGCAGGCAAAAAAAAAAAAAAGAAGAAAAAAAAATCAATCTAAAAGGTTCTGCAATTTTGAGGGCACACGAAGCAAAAGTGTTATGTTTCTGAACTCTTAATAGTAATGAAGCTTCTTGAGAAGCAATGAAGAATTCTGCATTTTGTTTCTTAAAGATGTGTCCTCCTATCTTTTCAAAATCTTAAAAAGCTTTTCCTTCTAAGCTTCCTATTGTATTAAAGTCTTCAGGCTAGTTTTTCGTCCTATTGTTATAAAGGCAAGTAGATAGTACCCAAACACCTTCGACTATGAGGCTATGAGATATCCAAAATATGCATATATTCGTAATTAAATATCAGAGGGACCTAAATACTTAAAATCAAGCATCTGATGGATAAAAAAAGCACATATATTGTGATCAATGATCCTAACAGTGCTTTAGAAGCGGTATTTGAATTTCATTCAGATAGTTCTGCTCTTTAATGGATCTTGTATCTGGATACAGTTTAGACTGTCGGTAGCTAAAAATGGATTTTTCCTTAGAATGGAAAGGAAAGTAACTAGAAATTGATGGTGCTCTTTATCTGGATGATTAGTCTCTCGATGGTAGCATTGTTTCTCTTAGTATTAGTTAGTCACTTGGGATGGTATATGCTTCATGCTTTTAAAGAGGTTCTGGAGTACTTATTGCTAGGATCCTGCTCATGTCTTGGTAGATACAGCCTCGTCATTTACTTCCGTACGCTTCAGCCAAATTATTTACTCTCATAAAAAAAATTATTTCTTGTGTGAAATAAAATAAGCTTGTAAGGTTCGCTGAAAAGGGGCTTGAAAGAACATCAAATTTACATTTTATGTTAAAAGTTAATGGTTTTCCGGTTTTCATTCATAGATGAATTTTCGATGAAACAGTCTTCAAAAGGAGAATTCAAAAACTTAAAACTAGCAACCATAAATCCCAGAAATAACAACTACCTAGACCTCAAGTCCACTTGCAGCCGTCTTTTTATTTGATAGGAAGAAGAGTAATACCAACTTGATTAACGTAATCTAAAAGATCTTTTTCTTCGAGAACTAGAGGTTAAGGGCCTTGGCTTAGAACCACTCTCAGTGGGATTAGATGAACAAGAAGGATTGCTGAGAAATAGGGTTTAAATCCCTGTCTTGAACTTCGTTGGAAAGAGAAAATAAACCACCTTCAAAGTTGTCTTCCATAAAGCCAACATTATAATAAAGAGAAGACTGTAATTGCAAAATAATTCAGGGTGGTTTGAGACATTATATATTATTCTACTCTCTTCTTAACAAGTTCTCGACTTTCTAGCATTAGCTTAGCTTTAGCTTAGGTTCTAGTCACATTATCATTTCCATGATTATGAAACATTTACACGTTTCTTCCTGGATCTGAGGAACCTTTAGTTTGGCTTATGTTGCTGCTCATCTTCTCTTTTGGTTTCCTCGTTATCATTATTATGACTCAATTACTGCCTCCAAGCGCATTTTGATCCATTATTGTCTTTGACTTTTTGTTTGATACCTTGGTTTATGGACGTGAGGCATTATTCACTCTCATGTTGCTGCTCAGGGTGAGAGCTTGTTCTCGACCTTTATAAATATATGAAGAAAATAATGTGCATATTTAGGTTACATGGTCGCTAAACTTCTTTCTATTTGATTACTGTTATCAGTAATAACTTCTTTTTGTTGCCTAATATTTCCTCACCTTTTTTTGGCAGTACCTCCATTATCTGCTGAAGAAGATAGACTGTGGAACATTGTGAGGGCCAATTCTCTAGATTTTAATGCTTGGACTTCTTTGATCGAAGAGACAGAGAAGGTGGCAGAGGTATGCAAGAATGAATATTAAAAAGTATTATGGTTTATCATTTTATGGAAAGACTTATTCCAGTTTTGGCTTCTTTTCAGGATAACATACTCAAAATCCGGCGAGTTTATGATGCCTTTTTAGCAGAATTTCCTTTATGCTATGGTTATTGGAAGAAGTATGCAGATCATGAGGCACGGTTTGGTTCAACTGACAAAGTTGTTGAGGTGTATGAACGAGCAGTGCATGGGGTCACCTACTCGGTTGATATTTGGCTGCATTATTGCATATTCACTCTTAGTACATATGGAGATCCAGAGACCATTAGAAGGTATAGCATTCTGTTTTCCTATTTGCATTTCCTGGTGTACCAATACTATGACTCTTAGTTACTTGGACCTGATAACAATCTTCTTCTCTTTGCTTGTAACCTCTGTTTAGATGGCTGTACCAGTGATTTCCTACATGTAAGGTGGAAAGATTTGATTGAAATATAGATTGGAATTGCATGTTCCAATGTGCATCCCCTGATATGGGGTTACAACGTTATATGCCTTTTTTAAAGTTATTTTTAATAAAAGATATAGTGTCAATTTCCCATCGTCTATTGTGGATTATGCCTTAGTCTGTAGTTATGGTGAACTACAGCAGTTGTTTAACCTTGGTCCACTGAGATGCATCAATATACAAATTGCTGCTGGGAATATCACGTTCAGTTATGGGCTAAGATGGCCTCTATCATTGCTTCATTCACGGACATAATTTGATTTTTAGGAAGGTAATTGAAGCATGCTGAAGTGTCATATGCTGTTAGAGTAAATTGTTCCTTCACCTTCAACGTTAGTGCAGTTGTTTCTGTTTTGTGAATACTTTGCACCACTTGATGATCTTTAGTTACTTAATAACCTTTTCCTGGTTGATGATATTTCAGGCTTTTTGAGAGAGGATTAGCGTATGTTGGGACAGATTACCTCTCCTTTCCCCTTTGGGATAAATATATTGAATACGAGTACACGCAGCAGGAGTGGGGTCGACTGGCTATGATATACACACGTATACTAGAAAATCCAAATCAACAGTTGGATCGGTATTTCAATAGGTGAGTCTTGCGAATCCGGACAATATTACTGTCTGTCATAATAATTTGGTATTGCCTTTTCCGGTGATCTTAATTCTTTTGCTTTTGAACATGGATGCTACTCTTAGATGTACTTGTCATACTTGCTAAGTCAACATTTTGTTGCTGGCTGGGGGTTATACACCCTTTTGTTGTCTGAATTACATTCTGTGTCAGGGAAAGCTATTCAGATAGATGGTTGTATGGGATTGATACTAATCCATATAGCTTTGTTAAACTTCTTTCCTTAATAAATAATCTAAAGTGTCCTTTTCCCTTTGGATCATGATGCAAATGTGTTGCAGCTTCAAGGAGTTGGCTGCAAATCGGCCATTGTCAGAGTTGAAGAGTTCTGAGGAGGCTGTATTAGATGTGCAATCAGAGGCTGGTGATCAAGTAAATGGGGAGGAAGGTCATCCTGATGCCACGGAACCATCATCTAAAACTGTAAGTGCTGGCTTAACAGAAGCAGAGGAGTTGGAGAAGTATATCGCCATTAGAGAAGAAATCTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGAAGGCCCTACTTTCATGTTAGACCACTAAATGTTGCAGAGCTTGATAATTGGCATAGTTACTTGGATTTTATAGAACAAGAAGGAGACTTAAACAAGGTACTTTAGTTTGTTTCTTGTTTTAAATATGTTTATTTTTTTTCGTTTTTAGTCGTCCTTGTTATATATTGACTTACAGTTAAAAAATATCTGCTGCATCATATGCTTTACTGGCTAAACCATTGGATGAAGCAACTATTTAATCGGGAATTTGAACTGAGACTAAAGCAGGGCCCTTCAATTTGGTTTCTTTAAGGCTAAGTACTTCGAACTCTCATTTATCAGTGGAGATTCTAGGTTCATGATGTGTTTGTACAGTAACTTTTTATTCTTTTTAAAATTCCAATGTTATGCATGCAGGTATCTTATCTTCCTAACCATCTGTCTGTCAGGCAAGGAGGGTCCCTCATTTCATATTTGAGGGGCCTCTCTATTCTACTGAGGAGTATTTCTGTTGCATATCTCTTTTCTGTTTCTTATCACATCTTTACATAAGGAATTTTAAATGTGAAGACCGTTTTATATGTTTTTCCTTTTTTCTTGTTTGAATTTTTTGTGAATAGGTGGTGAAGTTATACGAGAGATGCGTTATTGCTTGTGCCAACTATCCTGAATACTGGGTTCGGTATATTTTATACATGCAAGCAAGCGACAGTATGGATCTTTCCAATAATGCGCTTGCTCGAGCAAGCCAAGTTTTTGTCAAGGTAGGGAATACATGCATCTACCATTTACCTAATCTTATGATAATTGGTTGTAGTTATCATGATTAAGGACATGCATCTACCATTTACCTAATCTTATGATAATTGGTTGTAGTTATCATGATTAAGGATGACCTATTCATGATCCTACATAACTTATAATGTATCAAGATGCTTACTAGTCAAAAGGTTTTGGCTGGGCCACACAAGTTGTGGGCTTCCACTGGTGTACTTAGGGTTGTTTCCTCTTCCTGCATCCTCTTTAAGTGAGAAACTCAACTATCATTAACTAGTACAATTATCACCTAATGTATGCTTACAAATTATAATATTTGGTTGCAACAATGATTAGTACAGTAAAATGTGCATTGATCAATTTATTTTCACAAAAGGTTTGGTTGAAGCATTTTGAGAAAGACAGAGCATAGTCAACCTAAGTCCACAAGTAAATCAATATGGCATGACACAGTCAATGTTAGTGCATTTTCCAAATAATCAAAAGACAGCACCAGTTTCCAAAAATTTATGACCTAGCTTGTTTTGACCAAGATACTAAGACATTGTTGACAGAAATATTTGTTTGTACTTTTTTAAACGTTTCAATATTCTCATACAGTCACATTGTTGACAGAAATATTTGTTTGTACTTTATGAGTTACGAGAGACATTAAGATGTATGCTTTTACGTATATTCACTCCAATTTATATTATTTGGGAAATTGGAGATTCAAGGCATAAAAACATCCTTATTTTCATGGGCTGTATTGTATGTGAAAAAGGTACTTAAATATCTCTAGCCCTTGTGTCCTTCTCCTGTGTACATAACCCTATCTCATCTTGGCCACCAAATCCTTTCTCAGTCCAACCAAGTGGTTGACTAATACAAACATCTCGATTGTAAGCTCTGTTAATGTGGATTCATTTTTCCTCCCTATATGCAATTATTTTGCTTTATGAATTATTGCTATATCTTCTTTTTGAAGAAAAGTCCCAGTATATTATTTTATACATTTTCTTAATTAAACAAGTTCGAATAATGTTTGACAGCTTGCTGGAGACTATGTTAGTCAGCTGGTATCCCTAGATATTGATGTCTATGATGCATGGAATGGTAGACCTTTTTTAAAAAAGTTATTTAGTTTGGATTTTAAGTTAAAATGTACATGCATCCCAAACTTCAACAGAGACGACCGGAGATCCATTTATTTTCTGCTCGGTTCAAGGAGCAGAACGGGGATATTGCTGGTGCTCGAGCCTCTTATCAACTCGTGCATACTGAAATTTCACCTGGCCTTCTTGAAGCAATAATTAAGCATGCTAATATGGAACATCGTCTGGTAAGATGTCTTAAATAAGTTGTGATACATAGTGATGCATGGATTTTTAAATTTGGCCGTTTGAATTTTCAGGGAAACCTGGAAGAGGCATACTCTGTATATGAACAGGCCATCGCCATCGAAAGAGGAAAAGAACATTCTCGTGCATTACCGCTGTTATATGCTCAGTACTCGAGATTTCTGAACTTGGTATGTTTGCTGAAATTATGGTCCCTCTGCTTGGAGATTGTTCACATAATTAAGCATTCTGCATTTGTCCTTTCATAGTTTTCATTATGCTTCTTTACACCTCTAACTTAAATGGGGAACACTAAACGCATTTTGATTAATAATATAGGTTTCTAAGGATTTTGGATGTTACTGTTTATCTAGAGTTTACACCAAAAAAGTGCAACAAAAATAAAAGAGTCCAAACAGAAAATTGGGGTTTTTGTTCATTGTTTTTGCAAAAAAGAAAAAAAGAAAAATTGCCACCACAACGAAGGGTCTCAAGGAGCGGATACTCGAAGTAGATAGGACACGATGCAACCTAGCATCAAAGGAGAAAATCTTCTGAAACCCTTGAATGAGAATTTATTATGATTCAAAAAGTCTGCCAATGCAAAGGAGGAACCACATATTTATTGAGGATTTAAGCTAAGTAATTAAACTAACCTAACTATAAGCCTTACTTAAAAAGTGTCTTTTGGTGTATTTCTGTGTGTATTTTCTATCTTATTTAGAAAATTCGGCTATTTCATATTTTTGTTGTACCTAGTATTGCTGAGGTGGAAATGTTTTTAAACTACTGGCCTTTTTTCTTTTTTTGTTGATACTGATGCACAGCTTTTGAAGGGAAGTATTCCCCAGTTGTGCAAGACATTTCGTTTATATTAAAATAAAGAAGCTTGCTATTTTTTCTTTGGTCTTCTCAATTTTTTGAGCAGTCTCTTCTGGGGGCATGCGGTTAGTTGAATCAGCCTTTTTCTTGATTTCTGGAGCGTTGTTTTCTTAGAATCTTGTCTCTTCACTGTGTTGACAGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATTCTTGATAAGGCAGTTGAGCATGGTGAATTATCCAAACCGCTCATTGAGGTACTCCCTCTCTTTCCATATTTTGAAATATTTGAATTTAATCTCATAACTGTTGCTTTCCTGCGGTTAAATGAATACCTTTTTGCCTCCATGATTCATCCAGGCCTTGATTCATTTTGAGTCAATTCAGTCAGCAGCAAAGAGAATTGATTATTTAGATTCATTAGTTGAGAAGGTCATAGTGCCCAATACAGAGAATGCATCGGTCGTGAGTGCTTCAATGAGGGAGGAGTTATCAAGCATTTTCTTGGAGGTACGAATAAAGTTCATTATGTTTGCAGGGATAAGGCTTTTGAGGGTTGATAGACGTAATTGCAAGTTAAATATGAAGAATTAACTTCTTGGTCATGAGTATACTAGGAATTGTTCATTTGTTTTGGTTGACCTTACATTGATACAGATTGATAAGATTATTTAGTAGAAAGGTCCCTTGTTTTTCCACCATAATTTGGGTCGCACTCCTCTTTGGAGTTGTCAATATCTCCATTGCATGTATAATATTTTGGTACAGAGCAACACCAAGTTGAAGTATTTTAAAGGTAGAAAGTTCTTATTTGATGATGCTGAATACGGGAAGTAGATGCTCACGACATGAAATCTTTCTGACATTTTCTTGATCAGAAAATCTTTCTTCCATTAAAATACGTTTGGATTGTACTTTCCTGAATGCGCTCATGAATGATTTTGCAGTTTCTGAATCTCTTTGGAGATGTTCAGTCAATCAAGAAGGCGGAGGACAGACATGCAAAGCTATTCATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATTTAGCTTCTGAAAAAGCAAAAATGGCCAAATCCTATCCTAGTGTTGCTTCGCCAGCACAATCTGTGATGGGTGCTTATCCAACTGGTCAAAACCAGTGGGCAGCTAGCTATGGCTTACAACCGCAAGCCTGGCCACCTGTTGCTCAAGCACAGGGGCAACAATGGGCACCTGGTTATACCCAATCGGTAAATGCCTTTTTATCTTTCACCCTTTTTATTCTTCATATAACAAATAATGGAAACATTTCACACAAAAGGTCTAATTGCCCTTGTTATGTTTAGTAAATCCCGTCACTACTTGTGGAAGGTAAAGGCGAACTCACTTGTTTCTTTTTCCATTCCATGTTTTCTGGTTTCTATATACTTCATTTCTACCCTTCCAGTCACATAACACAGTCATTTGGCTTGCGTTATTTCCACACGAAGTAAAGAGCAGAAAAGAAATAACCCTTCTATTGTTTCCTCCCGTCTACACGAATACAGGCCTCGTACAGTGGGTATGGAAGCACATACACGAATCCACCAGTGTCCACATCAGTGTCACAAGCCTCCAGTTATGCGACCTATCCTCCTACATACCCTGTCCAGGTATTAAATCCTTCTCATCTCTTGTTAATTCCACAATATTTTGTTAGTTGGCCGGTTTCAAGAGACGTAGAACAATCATCTGTTTTGAGTTTGATGTGTTTGATGAGTACTTGAACTCAAAAATCATATTTTTCATGAAATGTTGTGTTTATTTACAGCAGCAGGCATATTCTGCACAGAGTTACGCCCAACCGACTGCTCAAGCAACAATTACACCATCACAGCAGCCAGCTTCAGTGGCTCAGCCGTATTACGGGAGTTACTATATGAATGGATGA

mRNA sequence

ATGGAGAAGGGGAAAACGGGCACACCCATTTGTTTTTTTCTTCCATCAACTTCCACTCCTCTCTCCACTCCACACCCTCGTCTTCTTCTTCCTTTCGATATGAGTGATGGCAATGCGTATGTTACGGATCCCAATTCTATTCAGCAAGGAAATCATGTTGGTGAGGTAGATGAGGCGATGGTATCTGTAGGAGTGACTGACCATAGTCAGAATAATGCTGTATCAGAAAATTCAGCAATGGAAACTGCTGAAGTAGTCAGTCATGATTCTTCTTTAAATGGAAGTGTTGCAGCCGTATCGGACAATGCCTTTTCTGTTGAGAACGGGAATGCTGTTGAGAATACCAACGAGGCTTCTGAGGAACAACACTTTGTTGATGGTTCTGTACCTCCATTATCTGCTGAAGAAGATAGACTGTGGAACATTGTGAGGGCCAATTCTCTAGATTTTAATGCTTGGACTTCTTTGATCGAAGAGACAGAGAAGGTGGCAGAGGATAACATACTCAAAATCCGGCGAGTTTATGATGCCTTTTTAGCAGAATTTCCTTTATGCTATGGTTATTGGAAGAAGTATGCAGATCATGAGGCACGGTTTGGTTCAACTGACAAAGTTGTTGAGGTGTATGAACGAGCAGTGCATGGGGTCACCTACTCGGTTGATATTTGGCTGCATTATTGCATATTCACTCTTAGTACATATGGAGATCCAGAGACCATTAGAAGGCTTTTTGAGAGAGGATTAGCGTATGTTGGGACAGATTACCTCTCCTTTCCCCTTTGGGATAAATATATTGAATACGAGTACACGCAGCAGGAGTGGGGTCGACTGGCTATGATATACACACGTATACTAGAAAATCCAAATCAACAGTTGGATCGGTATTTCAATAGCTTCAAGGAGTTGGCTGCAAATCGGCCATTGTCAGAGTTGAAGAGTTCTGAGGAGGCTGTATTAGATGTGCAATCAGAGGCTGGTGATCAAGTAAATGGGGAGGAAGGTCATCCTGATGCCACGGAACCATCATCTAAAACTGTAAGTGCTGGCTTAACAGAAGCAGAGGAGTTGGAGAAGTATATCGCCATTAGAGAAGAAATCTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGAAGGCCCTACTTTCATGTTAGACCACTAAATGTTGCAGAGCTTGATAATTGGCATAGTTACTTGGATTTTATAGAACAAGAAGGAGACTTAAACAAGGTGGTGAAGTTATACGAGAGATGCGTTATTGCTTGTGCCAACTATCCTGAATACTGGGTTCGGTATATTTTATACATGCAAGCAAGCGACAGTATGGATCTTTCCAATAATGCGCTTGCTCGAGCAAGCCAAGTTTTTGTCAAGAGACGACCGGAGATCCATTTATTTTCTGCTCGGTTCAAGGAGCAGAACGGGGATATTGCTGGTGCTCGAGCCTCTTATCAACTCGTGCATACTGAAATTTCACCTGGCCTTCTTGAAGCAATAATTAAGCATGCTAATATGGAACATCGTCTGGGAAACCTGGAAGAGGCATACTCTGTATATGAACAGGCCATCGCCATCGAAAGAGGAAAAGAACATTCTCGTGCATTACCGCTGTTATATGCTCAGTACTCGAGATTTCTGAACTTGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATTCTTGATAAGGCAGTTGAGCATGGTGAATTATCCAAACCGCTCATTGAGGCCTTGATTCATTTTGAGTCAATTCAGTCAGCAGCAAAGAGAATTGATTATTTAGATTCATTAGTTGAGAAGGTCATAGTGCCCAATACAGAGAATGCATCGGTCGTGAGTGCTTCAATGAGGGAGGAGTTATCAAGCATTTTCTTGGAGTTTCTGAATCTCTTTGGAGATGTTCAGTCAATCAAGAAGGCGGAGGACAGACATGCAAAGCTATTCATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATTTAGCTTCTGAAAAAGCAAAAATGGCCAAATCCTATCCTAGTGTTGCTTCGCCAGCACAATCTGTGATGGGTGCTTATCCAACTGGTCAAAACCAGTGGGCAGCTAGCTATGGCTTACAACCGCAAGCCTGGCCACCTGTTGCTCAAGCACAGGGGCAACAATGGGCACCTGGTTATACCCAATCGGCCTCGTACAGTGGGTATGGAAGCACATACACGAATCCACCAGTGTCCACATCAGTGTCACAAGCCTCCAGTTATGCGACCTATCCTCCTACATACCCTGTCCAGCAGCAGGCATATTCTGCACAGAGTTACGCCCAACCGACTGCTCAAGCAACAATTACACCATCACAGCAGCCAGCTTCAGTGGCTCAGCCGTATTACGGGAGTTACTATATGAATGGATGA

Coding sequence (CDS)

ATGGAGAAGGGGAAAACGGGCACACCCATTTGTTTTTTTCTTCCATCAACTTCCACTCCTCTCTCCACTCCACACCCTCGTCTTCTTCTTCCTTTCGATATGAGTGATGGCAATGCGTATGTTACGGATCCCAATTCTATTCAGCAAGGAAATCATGTTGGTGAGGTAGATGAGGCGATGGTATCTGTAGGAGTGACTGACCATAGTCAGAATAATGCTGTATCAGAAAATTCAGCAATGGAAACTGCTGAAGTAGTCAGTCATGATTCTTCTTTAAATGGAAGTGTTGCAGCCGTATCGGACAATGCCTTTTCTGTTGAGAACGGGAATGCTGTTGAGAATACCAACGAGGCTTCTGAGGAACAACACTTTGTTGATGGTTCTGTACCTCCATTATCTGCTGAAGAAGATAGACTGTGGAACATTGTGAGGGCCAATTCTCTAGATTTTAATGCTTGGACTTCTTTGATCGAAGAGACAGAGAAGGTGGCAGAGGATAACATACTCAAAATCCGGCGAGTTTATGATGCCTTTTTAGCAGAATTTCCTTTATGCTATGGTTATTGGAAGAAGTATGCAGATCATGAGGCACGGTTTGGTTCAACTGACAAAGTTGTTGAGGTGTATGAACGAGCAGTGCATGGGGTCACCTACTCGGTTGATATTTGGCTGCATTATTGCATATTCACTCTTAGTACATATGGAGATCCAGAGACCATTAGAAGGCTTTTTGAGAGAGGATTAGCGTATGTTGGGACAGATTACCTCTCCTTTCCCCTTTGGGATAAATATATTGAATACGAGTACACGCAGCAGGAGTGGGGTCGACTGGCTATGATATACACACGTATACTAGAAAATCCAAATCAACAGTTGGATCGGTATTTCAATAGCTTCAAGGAGTTGGCTGCAAATCGGCCATTGTCAGAGTTGAAGAGTTCTGAGGAGGCTGTATTAGATGTGCAATCAGAGGCTGGTGATCAAGTAAATGGGGAGGAAGGTCATCCTGATGCCACGGAACCATCATCTAAAACTGTAAGTGCTGGCTTAACAGAAGCAGAGGAGTTGGAGAAGTATATCGCCATTAGAGAAGAAATCTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGAAGGCCCTACTTTCATGTTAGACCACTAAATGTTGCAGAGCTTGATAATTGGCATAGTTACTTGGATTTTATAGAACAAGAAGGAGACTTAAACAAGGTGGTGAAGTTATACGAGAGATGCGTTATTGCTTGTGCCAACTATCCTGAATACTGGGTTCGGTATATTTTATACATGCAAGCAAGCGACAGTATGGATCTTTCCAATAATGCGCTTGCTCGAGCAAGCCAAGTTTTTGTCAAGAGACGACCGGAGATCCATTTATTTTCTGCTCGGTTCAAGGAGCAGAACGGGGATATTGCTGGTGCTCGAGCCTCTTATCAACTCGTGCATACTGAAATTTCACCTGGCCTTCTTGAAGCAATAATTAAGCATGCTAATATGGAACATCGTCTGGGAAACCTGGAAGAGGCATACTCTGTATATGAACAGGCCATCGCCATCGAAAGAGGAAAAGAACATTCTCGTGCATTACCGCTGTTATATGCTCAGTACTCGAGATTTCTGAACTTGGTATGTAAGAATGAAGGAAAAGCTAGAGAAATTCTTGATAAGGCAGTTGAGCATGGTGAATTATCCAAACCGCTCATTGAGGCCTTGATTCATTTTGAGTCAATTCAGTCAGCAGCAAAGAGAATTGATTATTTAGATTCATTAGTTGAGAAGGTCATAGTGCCCAATACAGAGAATGCATCGGTCGTGAGTGCTTCAATGAGGGAGGAGTTATCAAGCATTTTCTTGGAGTTTCTGAATCTCTTTGGAGATGTTCAGTCAATCAAGAAGGCGGAGGACAGACATGCAAAGCTATTCATTTCACATAAGAGTACATCAGAACTGAAAAAACGCCTTGCGGATGATTATTTAGCTTCTGAAAAAGCAAAAATGGCCAAATCCTATCCTAGTGTTGCTTCGCCAGCACAATCTGTGATGGGTGCTTATCCAACTGGTCAAAACCAGTGGGCAGCTAGCTATGGCTTACAACCGCAAGCCTGGCCACCTGTTGCTCAAGCACAGGGGCAACAATGGGCACCTGGTTATACCCAATCGGCCTCGTACAGTGGGTATGGAAGCACATACACGAATCCACCAGTGTCCACATCAGTGTCACAAGCCTCCAGTTATGCGACCTATCCTCCTACATACCCTGTCCAGCAGCAGGCATATTCTGCACAGAGTTACGCCCAACCGACTGCTCAAGCAACAATTACACCATCACAGCAGCCAGCTTCAGTGGCTCAGCCGTATTACGGGAGTTACTATATGAATGGATGA

Protein sequence

MEKGKTGTPICFFLPSTSTPLSTPHPRLLLPFDMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASSYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG
Homology
BLAST of Csor.00g009530 vs. ExPASy Swiss-Prot
Match: Q4KLU2 (Pre-mRNA-processing factor 39 OS=Xenopus laevis OX=8355 GN=prpf39 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.8e-75
Identity = 188/564 (33.33%), Postives = 296/564 (52.48%), Query Frame = 0

Query: 129 VPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGY 188
           +PPL  + ++ W  V+A   DFN WT L++  E+  E+++   R+ +DAFLA +P CYGY
Sbjct: 49  LPPLPPDFEKYWKSVQAYPEDFNTWTYLLQYVEQ--ENHLFAARKAFDAFLAHYPYCYGY 108

Query: 189 WKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY--GDPE---TIRRL 248
           WKKYAD E +  +  +  EVY R +  +T SVD+W+HY  F   T    DPE   T+R  
Sbjct: 109 WKKYADLEKKNNNILEADEVYRRGIQAITLSVDLWMHYLNFLKETLDPADPETSLTLRGT 168

Query: 249 FERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELA 308
           FE  +   G D+ S  LW+ YI +E  Q     +  IY+R+L  P Q    +F  FKE  
Sbjct: 169 FEHAVVSAGLDFRSDKLWEMYINWETEQGNLSGVTSIYSRLLGIPTQFYSLHFQRFKEHI 228

Query: 309 ANRPLSELKSSEEAV------LDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEEL- 368
                 E  +SE+ +        +    G   +   G  +  +P+ +T     TE E + 
Sbjct: 229 QGHLPREFLTSEKFIELRKELASMTLHGGTNDDIPSGLEEIKDPAKRT-----TEVENMR 288

Query: 369 EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLN 428
            + I + +EI+   +   SKI  FE  I+RPYFHV+PL  A+L+NW  YL+F  + G   
Sbjct: 289 HRIIEVHQEIFNLNEHEVSKIWNFEEEIKRPYFHVKPLEKAQLNNWKEYLEFELENGSNE 348

Query: 429 KVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSAR 488
           ++V L+ERCVIACA Y E+W++Y  YM+ + S++   +   RA  V + ++P +HL  A 
Sbjct: 349 RIVILFERCVIACACYEEFWIKYAKYME-NHSVEGVRHVYNRACHVHLAKKPMVHLLWAA 408

Query: 489 FKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGK 548
           F+EQ G++  AR   + + T I  GL    ++  N+E R GN++EA  + E+A+     K
Sbjct: 409 FEEQQGNLEEARRILKNIETAIE-GLAMVRLRRVNLERRHGNVKEAEHLLEEAM----NK 468

Query: 549 EHSRALPLLYA-QYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAK 608
             + +    YA + +R L  V  N  KAR++L  A++  + +  L   L+  E      +
Sbjct: 469 TKTSSESSFYAIKLARHLFKVQANVVKARKVLSNAIQKDKENTKLYLNLLEMEYNCDIKQ 528

Query: 609 RIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFG-DVQSIKKAEDRHAKLF 668
             + + +  +K I       S +S +MR + S   +EFL  FG DV  +    + H KL 
Sbjct: 529 NEENILAAFDKAI------KSPMSIAMRVKFSQRKVEFLEDFGSDVNKLLDTYNEHQKL- 588

Query: 669 ISHKSTSELKKRLADDYLASEKAK 679
           + H+   ++ KR A++ L   +AK
Sbjct: 589 LKHQ---DIVKRKAENGLEQPEAK 589

BLAST of Csor.00g009530 vs. ExPASy Swiss-Prot
Match: Q1JPZ7 (Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2)

HSP 1 Score: 271.9 bits (694), Expect = 2.3e-71
Identity = 202/656 (30.79%), Postives = 321/656 (48.93%), Query Frame = 0

Query: 100 SDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEE 159
           S++  ++E  +A +   E + E        P L  E +RL  +V  N  DFN W  L++ 
Sbjct: 116 SESPSNMELEDAPKEPAEPAAEADPAAPQEPELPTEYERLSKVVEDNPEDFNGWVYLLQY 175

Query: 160 TEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYS 219
            E+  E+++L  R+ +DAF   +P CYGYWKKYAD E + G      EVY R +  +  S
Sbjct: 176 VEQ--ENHLLGSRKAFDAFFLHYPYCYGYWKKYADIERKHGYIQMADEVYRRGLQAIPLS 235

Query: 220 VDIWLHYCIFTL----STYGDPET-IRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEW 279
           VD+WLHY  F      ++ G+ E+ IR  +E  +   GTD+ S  LW+ YI +E  Q + 
Sbjct: 236 VDLWLHYITFLRENQDTSDGEAESRIRASYEHAVLACGTDFRSDRLWEAYIAWETEQGKL 295

Query: 280 GRLAMIYTRILENPNQQLDRYFNSFKE-LAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 339
             +  IY R+L  P Q   ++F  FK+ + +N P   L   E   L V+    ++ +G+E
Sbjct: 296 ANVTAIYDRLLCIPTQLYSQHFQKFKDHVQSNNPKHFLSEEEFVSLRVELANANKPSGDE 355

Query: 340 -------------GHPDATEPSSKTVSAGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIG 399
                        G  D  +P+ +     +TE E +  K I  R+E++   +   SK   
Sbjct: 356 DAETEAPGEELPPGTEDLPDPAKR-----VTEIENMRHKVIETRQEMFNHNEHEVSKRWA 415

Query: 400 FETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRY 459
           FE  I+RPYFHV+ L   +L+NW  YLDF  + G   +VV L+ERC+IACA Y E+W++Y
Sbjct: 416 FEEGIKRPYFHVKALEKTQLNNWREYLDFELENGTPERVVVLFERCLIACALYEEFWIKY 475

Query: 460 ILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEIS 519
             Y++ S S +   +   +A  V + ++P +HL  A F+EQ G I  AR+  + V   + 
Sbjct: 476 AKYLE-SYSTEAVRHIYKKACTVHLPKKPNVHLLWAAFEEQQGSIDEARSILKAVEVSV- 535

Query: 520 PGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKN 579
           PGL    ++  ++E R GN+EEA ++ + AI   R    S        + +R L  V K+
Sbjct: 536 PGLAMVRLRRVSLERRHGNMEEAEALLQDAITNGRNSSES---SFYSVKLARQLVKVQKS 595

Query: 580 EGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVS 639
            G+A+++L +AVE  E +  L   L+  E      +    + +  ++ +  +    S ++
Sbjct: 596 IGRAKKVLLEAVEKDETNPKLYLNLLELEYSGDVQQNEAEIIACFDRALSSSMALESRIT 655

Query: 640 ASMREELSSIFLEFLNLFG-DVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAK 699
            S R+      ++FL  FG D+ ++  A ++H +L    +S     KR A++      AK
Sbjct: 656 FSQRK------VDFLEDFGSDINTLMAAYEQHQRLLAEQESF----KRKAENGSEEPDAK 715

Query: 700 MAKS-YPSVASPAQSVMGAYPTG--------------QNQWA--ASYGLQPQAWPP 718
             ++   SVAS     M A   G              QN W     YG   Q +PP
Sbjct: 716 RQRTDDQSVASGQMMDMQANHAGYNYNNWYQYNSWGSQNSWGQYGQYGQYNQYYPP 749

BLAST of Csor.00g009530 vs. ExPASy Swiss-Prot
Match: Q86UA1 (Pre-mRNA-processing factor 39 OS=Homo sapiens OX=9606 GN=PRPF39 PE=1 SV=3)

HSP 1 Score: 264.6 bits (675), Expect = 3.6e-69
Identity = 200/657 (30.44%), Postives = 317/657 (48.25%), Query Frame = 0

Query: 72  NAVSENSAMETAEVVSHDSSLNGSVAAVSDNAFSVENGNAVENTNEASEEQHFVD----- 131
           N+ + ++   +  VV H +  +  +  V++   S ++   V  + E +E    VD     
Sbjct: 11  NSSNGSTGNSSEVVVEHPTDFSTEIMNVTEMEQSPDDSPNVNASTEETEMASAVDLPVTL 70

Query: 132 ----GSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEF 191
                + PP   E ++ W  V  N  DF  W  L++  E+  E++++  R+ +D F   +
Sbjct: 71  TETEANFPP---EYEKFWKTVENNPQDFTGWVYLLQYVEQ--ENHLMAARKAFDRFFIHY 130

Query: 192 PLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY--GDPE-- 251
           P CYGYWKKYAD E R  +     EVY R +  +  SVD+W+HY  F   T   GDPE  
Sbjct: 131 PYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDPETN 190

Query: 252 -TIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFN 311
            TIR  FE  +   GTD+ S  LW+ YI +E  Q     +  IY RIL  P Q    +F 
Sbjct: 191 NTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSHHFQ 250

Query: 312 SFKELAANRPLSELKSSEEAV-LDVQSEAGDQVNGEEGHP---------DATEPSSKTVS 371
            FKE   N    +L + E+ + L  +  + +  +G++G P         D T+P+     
Sbjct: 251 RFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL--- 310

Query: 372 AGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYL 431
             +TE E +  + I I +E++   +   SK   FE  I+RPYFHV+PL  A+L NW  YL
Sbjct: 311 --ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL 370

Query: 432 DFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKR 491
           +F  + G   +VV L+ERCVI+CA Y E+W++Y  YM+ + S++   +  +RA  + + +
Sbjct: 371 EFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTIHLPK 430

Query: 492 RPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVY 551
           +P +H+  A F+EQ G+I  AR +      E   GL    ++  ++E R GNLEEA  + 
Sbjct: 431 KPMVHMLWAAFEEQQGNINEAR-NILKTFEECVLGLAMVRLRRVSLERRHGNLEEAEHLL 490

Query: 552 EQAIAIERGKEHSRALPLLYA-QYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALI 611
           + AI   +    S      YA + +R L  + KN  K+R++L +A+E  + +  L   L+
Sbjct: 491 QDAIKNAKSNNESS----FYAVKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLL 550

Query: 612 HFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFG-DVQSIK 671
             E      +  + + +  +K +         +   MR   S   +EFL  FG DV  + 
Sbjct: 551 EMEYSGDLKQNEENILNCFDKAV------HGSLPIKMRITFSQRKVEFLEDFGSDVNKLL 610

Query: 672 KAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQ 702
            A D H  L     S     KR A++     + K A +  + +S  Q + G     Q
Sbjct: 611 NAYDEHQTLLKEQDSL----KRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQ 641

BLAST of Csor.00g009530 vs. ExPASy Swiss-Prot
Match: Q8K2Z2 (Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3)

HSP 1 Score: 256.5 bits (654), Expect = 9.8e-67
Identity = 207/659 (31.41%), Postives = 317/659 (48.10%), Query Frame = 0

Query: 76  ENSAMETAEVVSHDSSLNGS-VAAVSDNAFSVE--NGNAVENTNEASEEQHF-------- 135
           +NS ME      + S+ N S VA V    FS E  N   +E + +AS   H         
Sbjct: 2   QNSHMEEYRNSDNGSTGNSSEVAVVEHPDFSTEIMNVTEMEQSPDASPSAHASTEENEMA 61

Query: 136 ---------VDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVY 195
                     +G  PP   E ++ W  V  N  DF  W  L++  E+  E++++  R+ +
Sbjct: 62  NAVNLPVTEAEGDFPP---EFEKFWKTVEMNPQDFTGWVYLLQYVEQ--ENHLMAARKAF 121

Query: 196 DAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY- 255
           D F   +P CYGYWKKYAD E R  +  +  EVY R +  +  SVD+W+HY  F   T  
Sbjct: 122 DKFFVHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLE 181

Query: 256 -GDPE---TIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQ 315
            GD E   TIR  FE  +   GTD+ S  LW+ YI +E  Q     +  +Y RIL  P Q
Sbjct: 182 PGDQETNTTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQ 241

Query: 316 QLDRYFNSFKELAANRPLSELKSSEEAV-LDVQSEAGDQVNGEEGHPDATEPSS-KTVSA 375
               +F  FKE   N    +L + E+ + L  +  + +  +G++G P    PS  + +S 
Sbjct: 242 LYSHHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDISP 301

Query: 376 G--LTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAE-LDNWHS 435
              +TE E +  + I I +E++   +   SK   FE  I+RPYFHV+PL  A+   NW  
Sbjct: 302 AKLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQPKKNWKE 361

Query: 436 YLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFV 495
           YL+F  + G   +VV L+ERCVI+CA Y E+W++Y  YM+ + S++   +  +RA  V +
Sbjct: 362 YLEFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYME-NHSIEGVRHVFSRACTVHL 421

Query: 496 KRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYS 555
            ++P  H+  A F+EQ G+I  AR   +    E   GL    ++  ++E R GN+EEA  
Sbjct: 422 PKKPMAHMLWAAFEEQQGNINEARIILR-TFEECVLGLAMVRLRRVSLERRHGNMEEAEH 481

Query: 556 VYEQAIAIERGKEHSRALPLLYA-QYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEA 615
           + + AI   +    S      YA + +R L  + KN  K+R++L +A+E  + +  L   
Sbjct: 482 LLQDAIKNAKSNNESS----FYAIKLARHLFKIQKNLPKSRKVLLEAIEKDKENTKLYLN 541

Query: 616 LIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFG-DVQS 675
           L+  E      +  + + +  +K I         +   MR   S   +EFL  FG DV  
Sbjct: 542 LLEMEYSCDLKQNEENILNCFDKAI------HGSLPIKMRITFSQRKVEFLEDFGSDVNK 601

Query: 676 IKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQ 702
           +  A D H  L    K    LK++  +    SE+ +  K++    S AQ + G     Q
Sbjct: 602 LLNAYDEHQTLL---KEQDTLKRKAEN---GSEEPEEKKAHTEDLSSAQIIDGDLQANQ 637

BLAST of Csor.00g009530 vs. ExPASy Swiss-Prot
Match: O74970 (Pre-mRNA-processing factor 39 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp39 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.9e-65
Identity = 155/442 (35.07%), Postives = 232/442 (52.49%), Query Frame = 0

Query: 135 EEDRLWNIVRANSLDFNAWTSLIEETEKV--------AEDNILKIRRVYDAFLAEFPLCY 194
           E D+    +  N  DF+AW  L+  +E +        ++  I  +R VYD FL ++PL +
Sbjct: 13  EWDKYNRQINKNPDDFDAWEGLVRASEHLEGGVGRNSSKQAINTLRSVYDRFLGKYPLLF 72

Query: 195 GYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFER 254
           GYWKKYAD E      +    +YER + G+ +SVD+W +YC F + T GD   +R LF +
Sbjct: 73  GYWKKYADFEFFVAGAEASEHIYERGIAGIPHSVDLWTNYCAFKMETNGDANEVRELFMQ 132

Query: 255 GLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANR 314
           G   VG D+LS P WDKY+E+E  Q+    +  +  R++  P  Q  RYF  F +++ ++
Sbjct: 133 GANMVGLDFLSHPFWDKYLEFEERQERPDNVFQLLERLIHIPLHQYARYFERFVQVSQSQ 192

Query: 315 PLSELKSSEEAVLDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEE--LEKYIAIRE 374
           P+ +L        DV +     V  E     +      TV  G  E E     +   I  
Sbjct: 193 PIQQLLPP-----DVLASIRADVTREPAKVVSAGSKQITVERGELEIEREMRARIYNIHL 252

Query: 375 EIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYER 434
           +I++K +   +K   FE+ I+RPYFHV+ L+ A+L NW  YLDF E EGD  ++  LYER
Sbjct: 253 QIFQKVQLETAKRWTFESEIKRPYFHVKELDEAQLVNWRKYLDFEEVEGDFQRICHLYER 312

Query: 435 CVIACANYPEYWVRYILYMQAS-DSMDLSNNALARASQVFVK-RRPEIHLFSARFKEQNG 494
           C+I CA Y E+W RY  +M A  D ++  +    RAS +F    RP I +  A F+E  G
Sbjct: 313 CLITCALYDEFWFRYARWMSAQPDHLNDVSIIYERASCIFASISRPGIRVQYALFEESQG 372

Query: 495 DIAGARASYQLVHTEISPGLLEAIIKHANMEHRLG---NLEEAYSVYEQAIAIERGKEHS 554
           +IA A+A YQ + T++ PG LEA++    +E R     +L  A++V      I  GK ++
Sbjct: 373 NIASAKAIYQSILTQL-PGNLEAVLGWVGLERRNAPNYDLTNAHAVLRS--IINEGKCNT 432

Query: 555 RALPLLYAQYSRFLNLVCKNEG 562
               +L  +    + LV K EG
Sbjct: 433 GITEVLITE---DIKLVWKIEG 443

BLAST of Csor.00g009530 vs. NCBI nr
Match: KAG6592841.1 (Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1578 bits (4085), Expect = 0.0
Identity = 807/807 (100.00%), Postives = 807/807 (100.00%), Query Frame = 0

Query: 1   MEKGKTGTPICFFLPSTSTPLSTPHPRLLLPFDMSDGNAYVTDPNSIQQGNHVGEVDEAM 60
           MEKGKTGTPICFFLPSTSTPLSTPHPRLLLPFDMSDGNAYVTDPNSIQQGNHVGEVDEAM
Sbjct: 1   MEKGKTGTPICFFLPSTSTPLSTPHPRLLLPFDMSDGNAYVTDPNSIQQGNHVGEVDEAM 60

Query: 61  VSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSVAAVSDNAFSVENGNAVENTNEASE 120
           VSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSVAAVSDNAFSVENGNAVENTNEASE
Sbjct: 61  VSVGVTDHSQNNAVSENSAMETAEVVSHDSSLNGSVAAVSDNAFSVENGNAVENTNEASE 120

Query: 121 EQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLA 180
           EQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLA
Sbjct: 121 EQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLA 180

Query: 181 EFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETI 240
           EFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETI
Sbjct: 181 EFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETI 240

Query: 241 RRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFK 300
           RRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFK
Sbjct: 241 RRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFK 300

Query: 301 ELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYI 360
           ELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYI
Sbjct: 301 ELAANRPLSELKSSEEAVLDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYI 360

Query: 361 AIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVK 420
           AIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVK
Sbjct: 361 AIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVK 420

Query: 421 LYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQ 480
           LYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQ
Sbjct: 421 LYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQ 480

Query: 481 NGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSR 540
           NGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSR
Sbjct: 481 NGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSR 540

Query: 541 ALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIDYL 600
           ALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIDYL
Sbjct: 541 ALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIDYL 600

Query: 601 DSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKST 660
           DSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKST
Sbjct: 601 DSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKST 660

Query: 661 SELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQ 720
           SELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQ
Sbjct: 661 SELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYGLQPQAWPPVAQ 720

Query: 721 AQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASSYATYPPTYPVQQQAYSAQSYAQP 780
           AQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASSYATYPPTYPVQQQAYSAQSYAQP
Sbjct: 721 AQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVSQASSYATYPPTYPVQQQAYSAQSYAQP 780

Query: 781 TAQATITPSQQPASVAQPYYGSYYMNG 807
           TAQATITPSQQPASVAQPYYGSYYMNG
Sbjct: 781 TAQATITPSQQPASVAQPYYGSYYMNG 807

BLAST of Csor.00g009530 vs. NCBI nr
Match: XP_023004938.1 (pre-mRNA-processing factor 39 isoform X2 [Cucurbita maxima])

HSP 1 Score: 1503 bits (3891), Expect = 0.0
Identity = 770/774 (99.48%), Postives = 774/774 (100.00%), Query Frame = 0

Query: 34  MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 93
           MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN
Sbjct: 1   MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 60

Query: 94  GSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 153
           GSVAAVSDNAFSVENGNAVENTNEASEEQ+FVDGSVPPLSAEEDRLWNIVRANSLDFNAW
Sbjct: 61  GSVAAVSDNAFSVENGNAVENTNEASEEQYFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 120

Query: 154 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 213
           TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV
Sbjct: 121 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 180

Query: 214 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 273
           HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE
Sbjct: 181 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 240

Query: 274 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 333
           WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE
Sbjct: 241 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 300

Query: 334 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 393
           GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP
Sbjct: 301 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 360

Query: 394 LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN 453
           LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN
Sbjct: 361 LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN 420

Query: 454 NALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME 513
           +ALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME
Sbjct: 421 DALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME 480

Query: 514 HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 573
           HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH
Sbjct: 481 HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 540

Query: 574 GELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF 633
           GELSKPLIEALIHFE+IQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF
Sbjct: 541 GELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF 600

Query: 634 LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV 693
           LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV
Sbjct: 601 LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV 660

Query: 694 MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS 753
           MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS
Sbjct: 661 MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS 720

Query: 754 QASSYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 807
           QAS+YATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG
Sbjct: 721 QASTYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 774

BLAST of Csor.00g009530 vs. NCBI nr
Match: XP_022959946.1 (pre-mRNA-processing factor 39-like [Cucurbita moschata])

HSP 1 Score: 1502 bits (3888), Expect = 0.0
Identity = 770/774 (99.48%), Postives = 771/774 (99.61%), Query Frame = 0

Query: 34  MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 93
           MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN
Sbjct: 1   MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 60

Query: 94  GSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 153
           GSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW
Sbjct: 61  GSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 120

Query: 154 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 213
           TSLIEETEKVAEDNIL IRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV
Sbjct: 121 TSLIEETEKVAEDNILNIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 180

Query: 214 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 273
           HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE
Sbjct: 181 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 240

Query: 274 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 333
           WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE
Sbjct: 241 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 300

Query: 334 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 393
           GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP
Sbjct: 301 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 360

Query: 394 LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN 453
           LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN
Sbjct: 361 LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN 420

Query: 454 NALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME 513
           NALARASQVFVKRRPEIHLFS RFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME
Sbjct: 421 NALARASQVFVKRRPEIHLFSGRFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME 480

Query: 514 HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 573
           HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH
Sbjct: 481 HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 540

Query: 574 GELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF 633
           GELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIV NTENASVVSASMREELSSIFLEF
Sbjct: 541 GELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVSNTENASVVSASMREELSSIFLEF 600

Query: 634 LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV 693
           LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV
Sbjct: 601 LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV 660

Query: 694 MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS 753
           MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS
Sbjct: 661 MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS 720

Query: 754 QASSYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 807
           QAS+YATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG
Sbjct: 721 QASTYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 774

BLAST of Csor.00g009530 vs. NCBI nr
Match: XP_023514089.1 (pre-mRNA-processing factor 39-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1501 bits (3885), Expect = 0.0
Identity = 769/774 (99.35%), Postives = 772/774 (99.74%), Query Frame = 0

Query: 34  MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 93
           MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN
Sbjct: 1   MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 60

Query: 94  GSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 153
           GSVAAV DNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW
Sbjct: 61  GSVAAVLDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 120

Query: 154 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 213
           TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV
Sbjct: 121 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 180

Query: 214 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 273
           HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE
Sbjct: 181 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 240

Query: 274 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 333
           WGRLAMIYTRILENPNQQLDRY+NSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE
Sbjct: 241 WGRLAMIYTRILENPNQQLDRYYNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 300

Query: 334 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 393
           GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP
Sbjct: 301 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 360

Query: 394 LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN 453
           LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN
Sbjct: 361 LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN 420

Query: 454 NALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME 513
           NALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME
Sbjct: 421 NALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME 480

Query: 514 HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 573
           HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH
Sbjct: 481 HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 540

Query: 574 GELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF 633
           GELSKPLIEALIHFE+IQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF
Sbjct: 541 GELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF 600

Query: 634 LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV 693
           LNLFGDVQSIKKAEDRHAKLFIS KSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV
Sbjct: 601 LNLFGDVQSIKKAEDRHAKLFISRKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV 660

Query: 694 MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS 753
           MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS
Sbjct: 661 MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS 720

Query: 754 QASSYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 807
           QAS+YATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG
Sbjct: 721 QASTYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 774

BLAST of Csor.00g009530 vs. NCBI nr
Match: XP_023004937.1 (pre-mRNA-processing factor 39 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1499 bits (3881), Expect = 0.0
Identity = 770/775 (99.35%), Postives = 774/775 (99.87%), Query Frame = 0

Query: 33  DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL 92
           DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL
Sbjct: 57  DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL 116

Query: 93  NGSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNA 152
           NGSVAAVSDNAFSVENGNAVENTNEASEEQ+FVDGSVPPLSAEEDRLWNIVRANSLDFNA
Sbjct: 117 NGSVAAVSDNAFSVENGNAVENTNEASEEQYFVDGSVPPLSAEEDRLWNIVRANSLDFNA 176

Query: 153 WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA 212
           WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA
Sbjct: 177 WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA 236

Query: 213 VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ 272
           VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ
Sbjct: 237 VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ 296

Query: 273 EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE 332
           EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE
Sbjct: 297 EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE 356

Query: 333 EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR 392
           EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR
Sbjct: 357 EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR 416

Query: 393 PLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLS 452
           PLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLS
Sbjct: 417 PLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLS 476

Query: 453 NNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANM 512
           N+ALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANM
Sbjct: 477 NDALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANM 536

Query: 513 EHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVE 572
           EHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVE
Sbjct: 537 EHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVE 596

Query: 573 HGELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLE 632
           HGELSKPLIEALIHFE+IQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLE
Sbjct: 597 HGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLE 656

Query: 633 FLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS 692
           FLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS
Sbjct: 657 FLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS 716

Query: 693 VMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSV 752
           VMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSV
Sbjct: 717 VMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSV 776

Query: 753 SQASSYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 807
           SQAS+YATYPPTYPVQQ AYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG
Sbjct: 777 SQASTYATYPPTYPVQQ-AYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 830

BLAST of Csor.00g009530 vs. ExPASy TrEMBL
Match: A0A6J1L0W1 (pre-mRNA-processing factor 39 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498094 PE=4 SV=1)

HSP 1 Score: 1503 bits (3891), Expect = 0.0
Identity = 770/774 (99.48%), Postives = 774/774 (100.00%), Query Frame = 0

Query: 34  MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 93
           MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN
Sbjct: 1   MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 60

Query: 94  GSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 153
           GSVAAVSDNAFSVENGNAVENTNEASEEQ+FVDGSVPPLSAEEDRLWNIVRANSLDFNAW
Sbjct: 61  GSVAAVSDNAFSVENGNAVENTNEASEEQYFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 120

Query: 154 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 213
           TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV
Sbjct: 121 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 180

Query: 214 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 273
           HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE
Sbjct: 181 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 240

Query: 274 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 333
           WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE
Sbjct: 241 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 300

Query: 334 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 393
           GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP
Sbjct: 301 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 360

Query: 394 LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN 453
           LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN
Sbjct: 361 LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN 420

Query: 454 NALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME 513
           +ALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME
Sbjct: 421 DALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME 480

Query: 514 HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 573
           HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH
Sbjct: 481 HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 540

Query: 574 GELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF 633
           GELSKPLIEALIHFE+IQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF
Sbjct: 541 GELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF 600

Query: 634 LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV 693
           LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV
Sbjct: 601 LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV 660

Query: 694 MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS 753
           MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS
Sbjct: 661 MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS 720

Query: 754 QASSYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 807
           QAS+YATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG
Sbjct: 721 QASTYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 774

BLAST of Csor.00g009530 vs. ExPASy TrEMBL
Match: A0A6J1H6A4 (pre-mRNA-processing factor 39-like OS=Cucurbita moschata OX=3662 GN=LOC111460846 PE=4 SV=1)

HSP 1 Score: 1502 bits (3888), Expect = 0.0
Identity = 770/774 (99.48%), Postives = 771/774 (99.61%), Query Frame = 0

Query: 34  MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 93
           MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN
Sbjct: 1   MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 60

Query: 94  GSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 153
           GSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW
Sbjct: 61  GSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 120

Query: 154 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 213
           TSLIEETEKVAEDNIL IRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV
Sbjct: 121 TSLIEETEKVAEDNILNIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 180

Query: 214 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 273
           HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE
Sbjct: 181 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 240

Query: 274 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 333
           WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE
Sbjct: 241 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 300

Query: 334 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 393
           GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP
Sbjct: 301 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 360

Query: 394 LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN 453
           LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN
Sbjct: 361 LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN 420

Query: 454 NALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME 513
           NALARASQVFVKRRPEIHLFS RFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME
Sbjct: 421 NALARASQVFVKRRPEIHLFSGRFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME 480

Query: 514 HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 573
           HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH
Sbjct: 481 HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 540

Query: 574 GELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF 633
           GELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIV NTENASVVSASMREELSSIFLEF
Sbjct: 541 GELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVSNTENASVVSASMREELSSIFLEF 600

Query: 634 LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV 693
           LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV
Sbjct: 601 LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV 660

Query: 694 MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS 753
           MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS
Sbjct: 661 MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS 720

Query: 754 QASSYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 807
           QAS+YATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG
Sbjct: 721 QASTYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 774

BLAST of Csor.00g009530 vs. ExPASy TrEMBL
Match: A0A6J1KRS7 (pre-mRNA-processing factor 39 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498094 PE=4 SV=1)

HSP 1 Score: 1499 bits (3881), Expect = 0.0
Identity = 770/775 (99.35%), Postives = 774/775 (99.87%), Query Frame = 0

Query: 33  DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL 92
           DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL
Sbjct: 57  DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL 116

Query: 93  NGSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNA 152
           NGSVAAVSDNAFSVENGNAVENTNEASEEQ+FVDGSVPPLSAEEDRLWNIVRANSLDFNA
Sbjct: 117 NGSVAAVSDNAFSVENGNAVENTNEASEEQYFVDGSVPPLSAEEDRLWNIVRANSLDFNA 176

Query: 153 WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA 212
           WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA
Sbjct: 177 WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA 236

Query: 213 VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ 272
           VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ
Sbjct: 237 VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ 296

Query: 273 EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE 332
           EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE
Sbjct: 297 EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE 356

Query: 333 EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR 392
           EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR
Sbjct: 357 EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR 416

Query: 393 PLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLS 452
           PLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLS
Sbjct: 417 PLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLS 476

Query: 453 NNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANM 512
           N+ALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANM
Sbjct: 477 NDALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANM 536

Query: 513 EHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVE 572
           EHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVE
Sbjct: 537 EHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVE 596

Query: 573 HGELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLE 632
           HGELSKPLIEALIHFE+IQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLE
Sbjct: 597 HGELSKPLIEALIHFEAIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLE 656

Query: 633 FLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS 692
           FLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS
Sbjct: 657 FLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS 716

Query: 693 VMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSV 752
           VMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSV
Sbjct: 717 VMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSV 776

Query: 753 SQASSYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 807
           SQAS+YATYPPTYPVQQ AYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG
Sbjct: 777 SQASTYATYPPTYPVQQ-AYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 830

BLAST of Csor.00g009530 vs. ExPASy TrEMBL
Match: A0A1S3CBE2 (pre-mRNA-processing factor 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)

HSP 1 Score: 1424 bits (3685), Expect = 0.0
Identity = 725/775 (93.55%), Postives = 745/775 (96.13%), Query Frame = 0

Query: 33  DMSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSL 92
           DM DGNAYVTDPNS+QQGNHV EVDE    V VTDHSQN AVSENSAMETA +V HDSS+
Sbjct: 57  DMGDGNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSV 116

Query: 93  NGSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNA 152
           NGSVA  S NA SVENGN VEN NEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+
Sbjct: 117 NGSVATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNS 176

Query: 153 WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA 212
           WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA
Sbjct: 177 WTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERA 236

Query: 213 VHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQ 272
           VHGVTYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEY QQ
Sbjct: 237 VHGVTYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQ 296

Query: 273 EWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGE 332
           EWGRLAMIYTRILENPNQQLDRYFNSFKELAA+RPLSELKSSEEAV+DVQSEAGDQVNGE
Sbjct: 297 EWGRLAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGE 356

Query: 333 EGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR 392
           EGHP+A+EPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR
Sbjct: 357 EGHPEASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVR 416

Query: 393 PLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLS 452
           PLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYW+RYIL MQASDSMDL+
Sbjct: 417 PLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDSMDLA 476

Query: 453 NNALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANM 512
           NNALARASQVFVKRRPEIHLF+ARFKEQNGDI GARASYQLVH+EISPGLLEAIIKHANM
Sbjct: 477 NNALARASQVFVKRRPEIHLFAARFKEQNGDITGARASYQLVHSEISPGLLEAIIKHANM 536

Query: 513 EHRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVE 572
           EHRLGNLE+AYSVYEQAIAIERGKEHSRALPLLYAQYSRF NLVCKNEGKAREILDKAVE
Sbjct: 537 EHRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVE 596

Query: 573 HGELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLE 632
           HGELSKPLIEALIHFE+IQS  KRIDYLDSLVEKVIVPNTENA+VVSASMREELSSIFLE
Sbjct: 597 HGELSKPLIEALIHFEAIQSTTKRIDYLDSLVEKVIVPNTENATVVSASMREELSSIFLE 656

Query: 633 FLNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS 692
           FLNLFGDVQSIKKAEDRH KLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS
Sbjct: 657 FLNLFGDVQSIKKAEDRHVKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS 716

Query: 693 VMGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSV 752
           +MG YPTGQNQWAASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSV
Sbjct: 717 LMGVYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSV 776

Query: 753 SQASSYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 807
           SQAS+YATYPPTYP QQQAYSAQ+YAQPTAQAT+ PSQQ ASVAQPYYGSYYMNG
Sbjct: 777 SQASTYATYPPTYPAQQQAYSAQTYAQPTAQATVAPSQQTASVAQPYYGSYYMNG 831

BLAST of Csor.00g009530 vs. ExPASy TrEMBL
Match: A0A1S3CCM2 (pre-mRNA-processing factor 39 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498921 PE=4 SV=1)

HSP 1 Score: 1421 bits (3679), Expect = 0.0
Identity = 724/774 (93.54%), Postives = 744/774 (96.12%), Query Frame = 0

Query: 34  MSDGNAYVTDPNSIQQGNHVGEVDEAMVSVGVTDHSQNNAVSENSAMETAEVVSHDSSLN 93
           M DGNAYVTDPNS+QQGNHV EVDE    V VTDHSQN AVSENSAMETA +V HDSS+N
Sbjct: 1   MGDGNAYVTDPNSVQQGNHVVEVDEMKADVVVTDHSQNAAVSENSAMETAPLVGHDSSVN 60

Query: 94  GSVAAVSDNAFSVENGNAVENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAW 153
           GSVA  S NA SVENGN VEN NEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+W
Sbjct: 61  GSVATESVNASSVENGNVVENANEAPEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNSW 120

Query: 154 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 213
           TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV
Sbjct: 121 TSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAV 180

Query: 214 HGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQE 273
           HGVTYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEY QQE
Sbjct: 181 HGVTYSVDIWLHYCIFTLGTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQE 240

Query: 274 WGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKSSEEAVLDVQSEAGDQVNGEE 333
           WGRLAMIYTRILENPNQQLDRYFNSFKELAA+RPLSELKSSEEAV+DVQSEAGDQVNGEE
Sbjct: 241 WGRLAMIYTRILENPNQQLDRYFNSFKELAASRPLSELKSSEEAVVDVQSEAGDQVNGEE 300

Query: 334 GHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 393
           GHP+A+EPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP
Sbjct: 301 GHPEASEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRP 360

Query: 394 LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSN 453
           LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYW+RYIL MQASDSMDL+N
Sbjct: 361 LNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDSMDLAN 420

Query: 454 NALARASQVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANME 513
           NALARASQVFVKRRPEIHLF+ARFKEQNGDI GARASYQLVH+EISPGLLEAIIKHANME
Sbjct: 421 NALARASQVFVKRRPEIHLFAARFKEQNGDITGARASYQLVHSEISPGLLEAIIKHANME 480

Query: 514 HRLGNLEEAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEH 573
           HRLGNLE+AYSVYEQAIAIERGKEHSRALPLLYAQYSRF NLVCKNEGKAREILDKAVEH
Sbjct: 481 HRLGNLEDAYSVYEQAIAIERGKEHSRALPLLYAQYSRFQNLVCKNEGKAREILDKAVEH 540

Query: 574 GELSKPLIEALIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEF 633
           GELSKPLIEALIHFE+IQS  KRIDYLDSLVEKVIVPNTENA+VVSASMREELSSIFLEF
Sbjct: 541 GELSKPLIEALIHFEAIQSTTKRIDYLDSLVEKVIVPNTENATVVSASMREELSSIFLEF 600

Query: 634 LNLFGDVQSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSV 693
           LNLFGDVQSIKKAEDRH KLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQS+
Sbjct: 601 LNLFGDVQSIKKAEDRHVKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSL 660

Query: 694 MGAYPTGQNQWAASYGLQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPPVSTSVS 753
           MG YPTGQNQWAASYG+QPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNP VSTSVS
Sbjct: 661 MGVYPTGQNQWAASYGVQPQAWPPVAQAQGQQWAPGYTQSASYSGYGSTYTNPQVSTSVS 720

Query: 754 QASSYATYPPTYPVQQQAYSAQSYAQPTAQATITPSQQPASVAQPYYGSYYMNG 807
           QAS+YATYPPTYP QQQAYSAQ+YAQPTAQAT+ PSQQ ASVAQPYYGSYYMNG
Sbjct: 721 QASTYATYPPTYPAQQQAYSAQTYAQPTAQATVAPSQQTASVAQPYYGSYYMNG 774

BLAST of Csor.00g009530 vs. TAIR 10
Match: AT1G04080.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 904.0 bits (2335), Expect = 8.4e-263
Identity = 477/773 (61.71%), Postives = 578/773 (74.77%), Query Frame = 0

Query: 58  EAMVSVGVT-----DHSQNNAVSENSAMETAEVVSHDSSLNGSVAAVSDNAFSVENGNAV 117
           EAMVS G T     D++ + A  E++  ETA +V    S+N    ++ +    VENG+A 
Sbjct: 5   EAMVSEGYTSAPYGDYNASAATVESTGQETAPIVDASHSVNND--SLVNGTAPVENGSAT 64

Query: 118 ENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIR 177
           +N    +      D +   LS EE+RLWNIVRANSL+FNAWT+LI+ETE++A+DNI KIR
Sbjct: 65  DNVAVTAPAAEHGDNTGSTLSTEEERLWNIVRANSLEFNAWTALIDETERIAQDNIAKIR 124

Query: 178 RVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLS 237
           +VYDAFLAEFPLCYGYWKK+ADHEAR G+ DKVVEVYERAV GVTYSVDIWLHYC F ++
Sbjct: 125 KVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYERAVLGVTYSVDIWLHYCTFAIN 184

Query: 238 TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQL 297
           TYGDPETIRRLFER L YVGTD+LS PLWDKYIEYEY QQ+W R+A+IYTRILENP Q L
Sbjct: 185 TYGDPETIRRLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENPIQNL 244

Query: 298 DRYFNSFKELAANRPLSELKSSEE---AVLDVQSEAGDQVNGEEGH---------PDATE 357
           DRYF+SFKELA  RPLSEL+S+EE   A + V  +A +    E G            +TE
Sbjct: 245 DRYFSSFKELAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVDGSTE 304

Query: 358 PSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELD 417
            S K  SA  TE EEL+KY+ IRE +Y K+KEF+SKIIG+E AIRRPYFHVRPLNVAEL+
Sbjct: 305 QSPKLESASSTEPEELKKYVGIREAMYIKSKEFESKIIGYEMAIRRPYFHVRPLNVAELE 364

Query: 418 NWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARAS 477
           NWH+YLDFIE++GD NKVVKLYERCV+ CANYPEYW+RY+  M+AS S DL+ NALARA+
Sbjct: 365 NWHNYLDFIERDGDFNKVVKLYERCVVTCANYPEYWIRYVTNMEASGSADLAENALARAT 424

Query: 478 QVFVKRRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLE 537
           QVFVK++PEIHLF+AR KEQNGDIAGARA+YQLVH+EISPGLLEA+IKHANME+RLGNL+
Sbjct: 425 QVFVKKQPEIHLFAARLKEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLD 484

Query: 538 EAYSVYEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPL 597
           +A+S+YEQ IA+E+GKEHS  LPLLYAQYSRF  LV ++  KAR I+ +A++H + SKPL
Sbjct: 485 DAFSLYEQVIAVEKGKEHSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPL 544

Query: 598 IEALIHFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDV 657
           +EALIHFE+IQ   + IDYL+ LVEKVI P+ +  ++ S++ REELS I++EFL +FGDV
Sbjct: 545 MEALIHFEAIQPPPREIDYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDV 604

Query: 658 QSIKKAEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTG 717
           +SIKKAED+H KLF  H+STSELKKR ADD+LAS++ KMAK+Y +   PAQ V  AYP  
Sbjct: 605 KSIKKAEDQHVKLFYPHRSTSELKKRSADDFLASDRTKMAKTY-NGTPPAQPVSNAYPNA 664

Query: 718 QNQWAASYGLQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPPVSTSVSQA 777
           Q QW+  Y  QPQ WPP   A AQ QQW P Y Q A+Y  YG   + YT P   T V QA
Sbjct: 665 QAQWSGGYAAQPQTWPPAQAAPAQPQQWNPAYGQQAAYGAYGGYPAGYTAPQAPTPVPQA 724

Query: 778 SSYATYPPTYPVQQQAYSAQSYAQPTAQA--TITPSQQPASVAQP--YYGSYY 805
           ++Y  YP       Q Y  QSYA P A A     P QQPA+   P  YY +YY
Sbjct: 725 AAYGAYP------AQTYPTQSYAPPVAAAAPAAAPVQQPAAAVAPQAYYNTYY 768

BLAST of Csor.00g009530 vs. TAIR 10
Match: AT1G04080.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 878.6 bits (2269), Expect = 3.8e-255
Identity = 477/828 (57.61%), Postives = 578/828 (69.81%), Query Frame = 0

Query: 58  EAMVSVGVT-----DHSQNNAVSENSAMETAEVVSHDSSLNGSVAAVSDNAFSVENGNAV 117
           EAMVS G T     D++ + A  E++  ETA +V    S+N    ++ +    VENG+A 
Sbjct: 5   EAMVSEGYTSAPYGDYNASAATVESTGQETAPIVDASHSVNND--SLVNGTAPVENGSAT 64

Query: 118 ENTNEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIR 177
           +N    +      D +   LS EE+RLWNIVRANSL+FNAWT+LI+ETE++A+DNI KIR
Sbjct: 65  DNVAVTAPAAEHGDNTGSTLSTEEERLWNIVRANSLEFNAWTALIDETERIAQDNIAKIR 124

Query: 178 RVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLS 237
           +VYDAFLAEFPLCYGYWKK+ADHEAR G+ DKVVEVYERAV GVTYSVDIWLHYC F ++
Sbjct: 125 KVYDAFLAEFPLCYGYWKKFADHEARVGAMDKVVEVYERAVLGVTYSVDIWLHYCTFAIN 184

Query: 238 TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQL 297
           TYGDPETIRRLFER L YVGTD+LS PLWDKYIEYEY QQ+W R+A+IYTRILENP Q L
Sbjct: 185 TYGDPETIRRLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENPIQNL 244

Query: 298 DRYFNSFKELAANRPLSELKSSEE---AVLDVQSEAGDQVNGEEGH---------PDATE 357
           DRYF+SFKELA  RPLSEL+S+EE   A + V  +A +    E G            +TE
Sbjct: 245 DRYFSSFKELAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVDGSTE 304

Query: 358 PSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELD 417
            S K  SA  TE EEL+KY+ IRE +Y K+KEF+SKIIG+E AIRRPYFHVRPLNVAEL+
Sbjct: 305 QSPKLESASSTEPEELKKYVGIREAMYIKSKEFESKIIGYEMAIRRPYFHVRPLNVAELE 364

Query: 418 NWHSYLDFIEQEGDLNK------------------------------------------- 477
           NWH+YLDFIE++GD NK                                           
Sbjct: 365 NWHNYLDFIERDGDFNKLSSIWCIICLIGFPLDQATFKWEITETKACASICSNVINAGVF 424

Query: 478 ------------VVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVK 537
                       VVKLYERCV+ CANYPEYW+RY+  M+AS S DL+ NALARA+QVFVK
Sbjct: 425 LTFCLSGKEGPSVVKLYERCVVTCANYPEYWIRYVTNMEASGSADLAENALARATQVFVK 484

Query: 538 RRPEIHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSV 597
           ++PEIHLF+AR KEQNGDIAGARA+YQLVH+EISPGLLEA+IKHANME+RLGNL++A+S+
Sbjct: 485 KQPEIHLFAARLKEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFSL 544

Query: 598 YEQAIAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALI 657
           YEQ IA+E+GKEHS  LPLLYAQYSRF  LV ++  KAR I+ +A++H + SKPL+EALI
Sbjct: 545 YEQVIAVEKGKEHSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEALI 604

Query: 658 HFESIQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKK 717
           HFE+IQ   + IDYL+ LVEKVI P+ +  ++ S++ REELS I++EFL +FGDV+SIKK
Sbjct: 605 HFEAIQPPPREIDYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDVKSIKK 664

Query: 718 AEDRHAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWA 777
           AED+H KLF  H+STSELKKR ADD+LAS++ KMAK+Y +   PAQ V  AYP  Q QW+
Sbjct: 665 AEDQHVKLFYPHRSTSELKKRSADDFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQAQWS 724

Query: 778 ASYGLQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPPVSTSVSQASSYAT 805
             Y  QPQ WPP   A AQ QQW P Y Q A+Y  YG   + YT P   T V QA++Y  
Sbjct: 725 GGYAAQPQTWPPAQAAPAQPQQWNPAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYGA 784

BLAST of Csor.00g009530 vs. TAIR 10
Match: AT1G04080.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 687.2 bits (1772), Expect = 1.6e-197
Identity = 363/584 (62.16%), Postives = 438/584 (75.00%), Query Frame = 0

Query: 242 RLFERGLAYVGTDYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKE 301
           RLFER L YVGTD+LS PLWDKYIEYEY QQ+W R+A+IYTRILENP Q LDRYF+SFKE
Sbjct: 6   RLFERALVYVGTDFLSSPLWDKYIEYEYMQQDWSRVALIYTRILENPIQNLDRYFSSFKE 65

Query: 302 LAANRPLSELKSSEE---AVLDVQSEAGDQVNGEEGH---------PDATEPSSKTVSAG 361
           LA  RPLSEL+S+EE   A + V  +A +    E G            +TE S K  SA 
Sbjct: 66  LAETRPLSELRSAEESAAAAVAVAGDASESAASESGEKADEGRSQVDGSTEQSPKLESAS 125

Query: 362 LTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFI 421
            TE EEL+KY+ IRE +Y K+KEF+SKIIG+E AIRRPYFHVRPLNVAEL+NWH+YLDFI
Sbjct: 126 STEPEELKKYVGIREAMYIKSKEFESKIIGYEMAIRRPYFHVRPLNVAELENWHNYLDFI 185

Query: 422 EQEGDLNKVVKLYERCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPE 481
           E++GD NKVVKLYERCV+ CANYPEYW+RY+  M+AS S DL+ NALARA+QVFVK++PE
Sbjct: 186 ERDGDFNKVVKLYERCVVTCANYPEYWIRYVTNMEASGSADLAENALARATQVFVKKQPE 245

Query: 482 IHLFSARFKEQNGDIAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQA 541
           IHLF+AR KEQNGDIAGARA+YQLVH+EISPGLLEA+IKHANME+RLGNL++A+S+YEQ 
Sbjct: 246 IHLFAARLKEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLDDAFSLYEQV 305

Query: 542 IAIERGKEHSRALPLLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFES 601
           IA+E+GKEHS  LPLLYAQYSRF  LV ++  KAR I+ +A++H + SKPL+EALIHFE+
Sbjct: 306 IAVEKGKEHSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPLMEALIHFEA 365

Query: 602 IQSAAKRIDYLDSLVEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDR 661
           IQ   + IDYL+ LVEKVI P+ +  ++ S++ REELS I++EFL +FGDV+SIKKAED+
Sbjct: 366 IQPPPREIDYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDVKSIKKAEDQ 425

Query: 662 HAKLFISHKSTSELKKRLADDYLASEKAKMAKSYPSVASPAQSVMGAYPTGQNQWAASYG 721
           H KLF  H+STSELKKR ADD+LAS++ KMAK+Y +   PAQ V  AYP  Q QW+  Y 
Sbjct: 426 HVKLFYPHRSTSELKKRSADDFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQAQWSGGYA 485

Query: 722 LQPQAWPP--VAQAQGQQWAPGYTQSASYSGYG---STYTNPPVSTSVSQASSYATYPPT 781
            QPQ WPP   A AQ QQW P Y Q A+Y  YG   + YT P   T V QA++Y  YP  
Sbjct: 486 AQPQTWPPAQAAPAQPQQWNPAYGQQAAYGAYGGYPAGYTAPQAPTPVPQAAAYGAYP-- 545

Query: 782 YPVQQQAYSAQSYAQPTAQA--TITPSQQPASVAQP--YYGSYY 805
                Q Y  QSYA P A A     P QQPA+   P  YY +YY
Sbjct: 546 ----AQTYPTQSYAPPVAAAAPAAAPVQQPAAAVAPQAYYNTYY 582

BLAST of Csor.00g009530 vs. TAIR 10
Match: AT5G46400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 413.3 bits (1061), Expect = 4.5e-115
Identity = 217/540 (40.19%), Postives = 329/540 (60.93%), Query Frame = 0

Query: 135 EEDRLWNIVRANSLDFNAWTSLIEETEKVA-EDNILKIRRVYDAFLAEFPLCYGYWKKYA 194
           + DRL     + +LDF+ WT LI E E  +  D+I K+  VYDAFL EFPLC+GYW+KYA
Sbjct: 30  DNDRLKETFSSGALDFDEWTLLISEIETTSFPDDIEKLCLVYDAFLLEFPLCHGYWRKYA 89

Query: 195 DHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGT 254
            H+ +  + +  VEV+ERAV   TYSV +WL YC F ++ Y DP  + RLFERGL+++G 
Sbjct: 90  YHKIKLCTLEDAVEVFERAVQAATYSVAVWLDYCAFAVAAYEDPHDVSRLFERGLSFIGK 149

Query: 255 DYLSFPLWDKYIEYEYTQQEWGRLAMIYTRILENPNQQLDRYFNSFKELAANRPLSELKS 314
           DY    LWDKYIEY   QQ+W  LA +Y R L+ P+++LD Y+ +F+++AA+     LK 
Sbjct: 150 DYSCCTLWDKYIEYLLGQQQWSSLANVYLRTLKYPSKKLDLYYKNFRKIAAS-----LKE 209

Query: 315 SEEAVLDVQSE-AGDQVNGEEGHPDATEPSSKTV-------SAGLTEAEELEKYIAIREE 374
             +  +DV  + + D +  +  H   T+     V       S+    ++ L  Y++I E+
Sbjct: 210 KIKCRIDVNGDLSSDPMEEDLVHTRHTDEEISIVVRELMGPSSSSAVSKALHTYLSIGEQ 269

Query: 375 IYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERC 434
            Y+ +++   KI  FET IRRPYFHV+PL+  +LDNWH+YL F E  GD +  + LYERC
Sbjct: 270 FYQDSRQLMEKISCFETQIRRPYFHVKPLDTNQLDNWHAYLSFGETYGDFDWAINLYERC 329

Query: 435 VIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGDIA 494
           +I CANY E+W RY+ ++++    +L+N ALARASQ FVK    IHLF+ARFKE  GD +
Sbjct: 330 LIPCANYTEFWFRYVDFVESKGGRELANFALARASQTFVKSASVIHLFNARFKEHVGDAS 389

Query: 495 GARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAI-AIERGKEHSRALPL 554
            A  +      E+  G +E + K ANME RLGN E A + Y +A+     GKE+      
Sbjct: 390 AASVALSRCGEELGFGFVENVTKKANMEKRLGNFEAAVTTYREALNKTLIGKENLETTAR 449

Query: 555 LYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIDYLDSLV 614
           LY Q+SR   ++  +   A +IL +  E+    K L+E L+    +   ++++D LD ++
Sbjct: 450 LYVQFSRLKYVITNSADDAAQILLEGNENVPHCKLLLEELMRLLMMHGGSRQVDLLDPII 509

Query: 615 EKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDRHAKLFISHKSTSELK 665
           +K +    +++  +SA  +EE+S++++EF++L G +  ++KA  RH KLF  H + ++L+
Sbjct: 510 DKELSHQADSSDGLSAEDKEEISNLYMEFIDLSGTIHDVRKALGRHIKLF-PHSARAKLR 563

BLAST of Csor.00g009530 vs. TAIR 10
Match: AT1G17760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.6e-11
Identity = 103/526 (19.58%), Postives = 198/526 (37.64%), Query Frame = 0

Query: 156 LIEETEKVAE----DNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYER 215
           ++EE E +A+      I +   +Y+  L+ +P    +WK+Y + +    + D   +++ R
Sbjct: 6   IVEEAEALAKRALHSPIAQATPIYEQLLSLYPTSARFWKQYVEAQMAVNNDDATKQIFSR 65

Query: 216 AVHGVTYSVDIWLHYCIFTLSTY------GDPETIRRLFERGLAYVGTDYLSFPLWDKYI 275
            +      V +W  Y  F    Y      G  ET  + FE  L Y+GTD  S P+W +YI
Sbjct: 66  CLL-TCLQVPLWQCYIRFIRKVYDKKGAEGQEET-TKAFEFMLNYIGTDIASGPIWTEYI 125

Query: 276 EYEYT------QQEWGR---LAMIYTRILENPNQQLDRYFNSFK--ELAANRPLSELKSS 335
            +  +       ++  R   L  +Y R +  P   +++ +  ++  E   NR L+     
Sbjct: 126 AFLKSLPALNLNEDLHRKTALRKVYHRAILTPTHHVEQLWKDYENFENTVNRQLA----- 185

Query: 336 EEAVLDVQSEAGDQVNGEEGHPDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFD 395
                             +G  +  +P   +  A      E +KYI          +E D
Sbjct: 186 ------------------KGLVNEYQPKFNSARA---VYRERKKYI----------EEID 245

Query: 396 SKIIGFETAIRRPYFHVRPLNVAELDN----WHSYLDF-------IEQEGDLNKVVKLYE 455
             ++            V P   ++ +     W  +L F       I+      +++  YE
Sbjct: 246 WNMLA-----------VPPTGTSKEETQWVAWKKFLSFEKGNPQRIDTASSTKRIIYAYE 305

Query: 456 RCVIACANYPEYWVRYILYMQASDSMDLSNNALARASQVFVKRRPEIHLFSARFKEQNGD 515
           +C++   +YP+ W  Y  +   S S D +     RA +         + F A  +E  G 
Sbjct: 306 QCLMCLYHYPDVWYDYAEWHVKSGSTDAAIKVFQRALKAIPDSEMLKYAF-AEMEESRGA 365

Query: 516 IAGARASYQLVHTEISPGLLEAIIKHANMEHRLGNLEEAYSVYEQAIAIERGKEHSRALP 575
           I  A+  Y+ +    +  L  A I++     R   +E A   +  A        H     
Sbjct: 366 IQSAKKLYENILGASTNSL--AHIQYLRFLRRAEGVEAARKYFLDARKSPSCTYH----- 425

Query: 576 LLYAQYSRFLNLVCKNEGKAREILDKAVEHGELSKPLIEALIHFESIQSAAKRIDYLDSL 635
            +Y  ++     + K    A  I ++ ++   +S+P+   ++ +    +       + +L
Sbjct: 426 -VYIAFATMAFCIDKEPKVAHNIFEEGLKL-YMSEPVY--ILKYADFLTRLNDDRNIRAL 463

Query: 636 VEKVIVPNTENASVVSASMREELSSIFLEFLNLFGDVQSIKKAEDR 650
            E+ +       S +      E+   F++F   +GD+ SI K E R
Sbjct: 486 FERAL-------STLPVEDSAEVWKRFIQFEQTYGDLASILKVEQR 463

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q4KLU25.8e-7533.33Pre-mRNA-processing factor 39 OS=Xenopus laevis OX=8355 GN=prpf39 PE=2 SV=1[more]
Q1JPZ72.3e-7130.79Pre-mRNA-processing factor 39 OS=Danio rerio OX=7955 GN=prpf39 PE=2 SV=2[more]
Q86UA13.6e-6930.44Pre-mRNA-processing factor 39 OS=Homo sapiens OX=9606 GN=PRPF39 PE=1 SV=3[more]
Q8K2Z29.8e-6731.41Pre-mRNA-processing factor 39 OS=Mus musculus OX=10090 GN=Prpf39 PE=1 SV=3[more]
O749701.9e-6535.07Pre-mRNA-processing factor 39 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
Match NameE-valueIdentityDescription
KAG6592841.10.0100.00Pre-mRNA-processing factor 39, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023004938.10.099.48pre-mRNA-processing factor 39 isoform X2 [Cucurbita maxima][more]
XP_022959946.10.099.48pre-mRNA-processing factor 39-like [Cucurbita moschata][more]
XP_023514089.10.099.35pre-mRNA-processing factor 39-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023004937.10.099.35pre-mRNA-processing factor 39 isoform X1 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1L0W10.099.48pre-mRNA-processing factor 39 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A6J1H6A40.099.48pre-mRNA-processing factor 39-like OS=Cucurbita moschata OX=3662 GN=LOC111460846... [more]
A0A6J1KRS70.099.35pre-mRNA-processing factor 39 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A1S3CBE20.093.55pre-mRNA-processing factor 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498921... [more]
A0A1S3CCM20.093.54pre-mRNA-processing factor 39 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498921... [more]
Match NameE-valueIdentityDescription
AT1G04080.18.4e-26361.71Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G04080.33.8e-25557.61Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G04080.21.6e-19762.16Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G46400.14.5e-11540.19Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G17760.11.6e-1119.58Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 509..529
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..347
NoneNo IPR availablePANTHERPTHR17204:SF5PRE-MRNA-PROCESSING FACTOR 39coord: 83..783
NoneNo IPR availablePANTHERPTHR17204PRE-MRNA PROCESSING PROTEIN PRP39-RELATEDcoord: 83..783
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 235..270
e-value: 2.4E-6
score: 37.1
coord: 413..445
e-value: 1.7E-4
score: 30.9
coord: 200..232
e-value: 0.21
score: 20.7
coord: 558..590
e-value: 140.0
score: 7.0
coord: 517..552
e-value: 58.0
score: 9.8
coord: 166..198
e-value: 8.7E-4
score: 28.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 393..687
e-value: 4.7E-48
score: 165.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 141..310
e-value: 3.9E-42
score: 146.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 143..306
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 357..663

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g009530.m01Csor.00g009530.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000395 mRNA 5'-splice site recognition
biological_process GO:0048510 regulation of timing of transition from vegetative to reproductive phase
biological_process GO:0006396 RNA processing
cellular_component GO:0000243 commitment complex
cellular_component GO:0005685 U1 snRNP
cellular_component GO:0071004 U2-type prespliceosome
molecular_function GO:0005515 protein binding