Csor.00g009360 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g009360
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	acanthoscurrin-1-like
Location	Csor_Chr08: 342652 .. 343053 (-)
RNA-Seq Expression	Csor.00g009360
Synteny	Csor.00g009360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAATTGTTTATGGCTATGCTCCTGGCTCTTCTAGCCACTCACGCCCTAGCTAGACCCACGCCCAAGGACGCCACCTTTACTGACCAAAAGAACTTCCTAACATACGGAGGACTCGGTGGCTACTCCGGCATCGGCAGCAACGGCCTCCCATTTGGCGGCCTTGGCGGTGCCGTTGGAGGAACTGGCCCTGGTGGTATTGGTGGAGGAATTGGTGGACTCGGTGGATTTGGAGGCGGTGGAGGCGCTGGTCTCGGTGGTGGTCTTGGTGGCGGTGGCCTTGGAGGAACCATGGGAGGTGGTAACCTCGGTGGCGGTCTCGGTGGTACAGTTGGCGGCGGTCTCGGCGGAGGACTTGGCGGTGGTGTTGGTGGTGGTGGCGGCTCTGGGCTTCCATGA

mRNA sequence

ATGGCCAAATTGTTTATGGCTATGCTCCTGGCTCTTCTAGCCACTCACGCCCTAGCTAGACCCACGCCCAAGGACGCCACCTTTACTGACCAAAAGAACTTCCTAACATACGGAGGACTCGGTGGCTACTCCGGCATCGGCAGCAACGGCCTCCCATTTGGCGGCCTTGGCGGTGCCGTTGGAGGAACTGGCCCTGGTGGTATTGGTGGAGGAATTGGTGGACTCGGTGGATTTGGAGGCGGTGGAGGCGCTGGTCTCGGTGGTGGTCTTGGTGGCGGTGGCCTTGGAGGAACCATGGGAGGTGGTAACCTCGGTGGCGGTCTCGGTGGTACAGTTGGCGGCGGTCTCGGCGGAGGACTTGGCGGTGGTGTTGGTGGTGGTGGCGGCTCTGGGCTTCCATGA

Coding sequence (CDS)

ATGGCCAAATTGTTTATGGCTATGCTCCTGGCTCTTCTAGCCACTCACGCCCTAGCTAGACCCACGCCCAAGGACGCCACCTTTACTGACCAAAAGAACTTCCTAACATACGGAGGACTCGGTGGCTACTCCGGCATCGGCAGCAACGGCCTCCCATTTGGCGGCCTTGGCGGTGCCGTTGGAGGAACTGGCCCTGGTGGTATTGGTGGAGGAATTGGTGGACTCGGTGGATTTGGAGGCGGTGGAGGCGCTGGTCTCGGTGGTGGTCTTGGTGGCGGTGGCCTTGGAGGAACCATGGGAGGTGGTAACCTCGGTGGCGGTCTCGGTGGTACAGTTGGCGGCGGTCTCGGCGGAGGACTTGGCGGTGGTGTTGGTGGTGGTGGCGGCTCTGGGCTTCCATGA

Protein sequence

MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAVGGTGPGGIGGGIGGLGGFGGGGGAGLGGGLGGGGLGGTMGGGNLGGGLGGTVGGGLGGGLGGGVGGGGGSGLP

Homology

[Close]

BLAST of Csor.00g009360 vs. NCBI nr
Match: XP_022960398.1 (acanthoscurrin-1-like [Cucurbita moschata] >KAG6592858.1 hypothetical protein SDJN03_12334, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025267.1 hypothetical protein SDJN02_11762, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191 bits (484), Expect = 7.25e-60
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
           MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV
Sbjct: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60

Query: 61  GGTGPGGIGGGIGGLGGFGGGGGAGLGGGLGGGGLGGTMGGGNLGGGLGGTVGGGLGGGL 120
           GGTGPGGIGGGIGGLGGFGGGGGAGLGGGLGGGGLGGTMGGGNLGGGLGGTVGGGLGGGL
Sbjct: 61  GGTGPGGIGGGIGGLGGFGGGGGAGLGGGLGGGGLGGTMGGGNLGGGLGGTVGGGLGGGL 120

Query: 121 GGGVGGGGGSGLP 133
           GGGVGGGGGSGLP
Sbjct: 121 GGGVGGGGGSGLP 133

[Close]

BLAST of Csor.00g009360 vs. NCBI nr
Match: XP_023004890.1 (acanthoscurrin-1-like [Cucurbita maxima])

HSP 1 Score: 172 bits (436), Expect = 1.63e-52
Identity = 128/140 (91.43%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
           MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV
Sbjct: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60

Query: 61  GGTGPGGIGGGIGGLGGFGGGG-------GAGLGGGLGGGGLGGTMGGGNLGGGLGGTVG 120
           GGTGPGGIGGGIGGLGGFGGGG       G GLGGGLGGGGLGGTMGGGNLGGGLGGTVG
Sbjct: 61  GGTGPGGIGGGIGGLGGFGGGGAGLGGGLGGGLGGGLGGGGLGGTMGGGNLGGGLGGTVG 120

Query: 121 GGLGGGLGGGVGGGGGSGLP 133
           GGLGGG    VGGGGGSGLP
Sbjct: 121 GGLGGG----VGGGGGSGLP 136

[Close]

BLAST of Csor.00g009360 vs. NCBI nr
Match: XP_023514578.1 (acanthoscurrin-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170 bits (431), Expect = 7.28e-52
Identity = 126/133 (94.74%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
           MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV
Sbjct: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60

Query: 61  GGTGPGGIGGGIGGLGGFGGGGGAGLGGGLGGGGLGGTMGGGNLGGGLGGTVGGGLGGGL 120
           GGTGPGGIGGGIGGLGGFGGGGGAG G GLGGGGLGGT+GGGNLGGGLGGTVGGGLGGG 
Sbjct: 61  GGTGPGGIGGGIGGLGGFGGGGGAG-GAGLGGGGLGGTIGGGNLGGGLGGTVGGGLGGG- 120

Query: 121 GGGVGGGGGSGLP 133
              VGGGGGSGLP
Sbjct: 121 ---VGGGGGSGLP 128

[Close]

BLAST of Csor.00g009360 vs. NCBI nr
Match: KAA0050560.1 (acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 120 bits (302), Expect = 3.35e-32
Identity = 98/135 (72.59%), Postives = 109/135 (80.74%), Query Frame = 0


Query: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
           MAKLFMA+LLAL+ATHALARPTPKD TF+DQKNFLTYGG+GGYSGIGSNGLPFGG+GGA+
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60

Query: 61  GGTG-PGGIGGGIGGLGGFGGGGGAGLGGGLGG--------GGLGGTMGGGNLGGGLGGT 120
           GG G  GG+GGG+GG          G+GGGLGG        GG+GGT GG  LGGGLGG 
Sbjct: 61  GGGGLGGGLGGGLGGA--------TGIGGGLGGLGGTGGGLGGIGGTTGG--LGGGLGGG 120

Query: 121 VGGGLGGGLGGGVGG 126
           +GGGLGGGLGGGVGG
Sbjct: 121 LGGGLGGGLGGGVGG 125

[Close]

BLAST of Csor.00g009360 vs. NCBI nr
Match: XP_011659762.1 (glycine-rich protein 5 [Cucumis sativus])

HSP 1 Score: 116 bits (290), Expect = 2.21e-30
Identity = 97/131 (74.05%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
           MAKLFMA+LLAL+ATHALARPTPKD TF+DQKNFLTYGG+GGYSGIG+NGLPFGGLGGA+
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGAI 60

Query: 61  GGTG-PGGIGGGIGGLGGFGGGGGAGLGGGLGG--------GGLGGTMGGGNLGGGLGGT 120
           GG G  GG+GGG+GG    G GGG G+GGGLGG        GG+GGT GG  LGGGLGG 
Sbjct: 61  GGGGLGGGLGGGLGG----GLGGGTGIGGGLGGLGGPGGGFGGIGGTTGG--LGGGLGGG 120

Query: 121 VGGGLGGGLGG 122
           +GGGLGGG+GG
Sbjct: 121 LGGGLGGGVGG 125

[Close]

BLAST of Csor.00g009360 vs. ExPASy TrEMBL
Match: A0A6J1H8T3 (acanthoscurrin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461135 PE=4 SV=1)

HSP 1 Score: 191 bits (484), Expect = 3.51e-60
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
           MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV
Sbjct: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60

Query: 61  GGTGPGGIGGGIGGLGGFGGGGGAGLGGGLGGGGLGGTMGGGNLGGGLGGTVGGGLGGGL 120
           GGTGPGGIGGGIGGLGGFGGGGGAGLGGGLGGGGLGGTMGGGNLGGGLGGTVGGGLGGGL
Sbjct: 61  GGTGPGGIGGGIGGLGGFGGGGGAGLGGGLGGGGLGGTMGGGNLGGGLGGTVGGGLGGGL 120

Query: 121 GGGVGGGGGSGLP 133
           GGGVGGGGGSGLP
Sbjct: 121 GGGVGGGGGSGLP 133

[Close]

BLAST of Csor.00g009360 vs. ExPASy TrEMBL
Match: A0A6J1KVV3 (acanthoscurrin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498068 PE=4 SV=1)

HSP 1 Score: 172 bits (436), Expect = 7.88e-53
Identity = 128/140 (91.43%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
           MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV
Sbjct: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60

Query: 61  GGTGPGGIGGGIGGLGGFGGGG-------GAGLGGGLGGGGLGGTMGGGNLGGGLGGTVG 120
           GGTGPGGIGGGIGGLGGFGGGG       G GLGGGLGGGGLGGTMGGGNLGGGLGGTVG
Sbjct: 61  GGTGPGGIGGGIGGLGGFGGGGAGLGGGLGGGLGGGLGGGGLGGTMGGGNLGGGLGGTVG 120

Query: 121 GGLGGGLGGGVGGGGGSGLP 133
           GGLGGG    VGGGGGSGLP
Sbjct: 121 GGLGGG----VGGGGGSGLP 136

[Close]

BLAST of Csor.00g009360 vs. ExPASy TrEMBL
Match: A0A5A7U5T7 (Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00150 PE=4 SV=1)

HSP 1 Score: 120 bits (302), Expect = 1.62e-32
Identity = 98/135 (72.59%), Postives = 109/135 (80.74%), Query Frame = 0


Query: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
           MAKLFMA+LLAL+ATHALARPTPKD TF+DQKNFLTYGG+GGYSGIGSNGLPFGG+GGA+
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAI 60

Query: 61  GGTG-PGGIGGGIGGLGGFGGGGGAGLGGGLGG--------GGLGGTMGGGNLGGGLGGT 120
           GG G  GG+GGG+GG          G+GGGLGG        GG+GGT GG  LGGGLGG 
Sbjct: 61  GGGGLGGGLGGGLGGA--------TGIGGGLGGLGGTGGGLGGIGGTTGG--LGGGLGGG 120

Query: 121 VGGGLGGGLGGGVGG 126
           +GGGLGGGLGGGVGG
Sbjct: 121 LGGGLGGGLGGGVGG 125

[Close]

BLAST of Csor.00g009360 vs. ExPASy TrEMBL
Match: A0A0A0K9U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1)

HSP 1 Score: 116 bits (290), Expect = 1.07e-30
Identity = 97/131 (74.05%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 1   MAKLFMAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAV 60
           MAKLFMA+LLAL+ATHALARPTPKD TF+DQKNFLTYGG+GGYSGIG+NGLPFGGLGGA+
Sbjct: 1   MAKLFMALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGNNGLPFGGLGGAI 60

Query: 61  GGTG-PGGIGGGIGGLGGFGGGGGAGLGGGLGG--------GGLGGTMGGGNLGGGLGGT 120
           GG G  GG+GGG+GG    G GGG G+GGGLGG        GG+GGT GG  LGGGLGG 
Sbjct: 61  GGGGLGGGLGGGLGG----GLGGGTGIGGGLGGLGGPGGGFGGIGGTTGG--LGGGLGGG 120

Query: 121 VGGGLGGGLGG 122
           +GGGLGGG+GG
Sbjct: 121 LGGGLGGGVGG 125

[Close]

BLAST of Csor.00g009360 vs. ExPASy TrEMBL
Match: A0A1S3CGR1 (acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1)

HSP 1 Score: 112 bits (280), Expect = 3.03e-29
Identity = 93/130 (71.54%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 6   MAMLLALLATHALARPTPKDATFTDQKNFLTYGGLGGYSGIGSNGLPFGGLGGAVGGTG- 65
           MA+LLAL+ATHALARPTPKD TF+DQKNFLTYGG+GGYSGIGSNGLPFGG+GGA+GG G 
Sbjct: 1   MALLLALVATHALARPTPKDDTFSDQKNFLTYGGVGGYSGIGSNGLPFGGVGGAIGGGGL 60

Query: 66  PGGIGGGIGGLGGFGGGGGAGLGGGLGG--------GGLGGTMGGGNLGGGLGGTVGGGL 125
            GG+GGG+GG          G+GGGLGG        GG+GGT GG  LGGGLGG +GGGL
Sbjct: 61  GGGLGGGLGGA--------TGIGGGLGGLGGTGGGLGGIGGTTGG--LGGGLGGGLGGGL 120

The following BLAST results are available for this feature:

BLAST of Csor.00g009360 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g009360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960398.1	7.25e-60	100.00	acanthoscurrin-1-like [Cucurbita moschata] >KAG6592858.1 hypothetical protein SD...	[more]
XP_023004890.1	1.63e-52	91.43	acanthoscurrin-1-like [Cucurbita maxima]	[more]
XP_023514578.1	7.28e-52	94.74	acanthoscurrin-1-like [Cucurbita pepo subsp. pepo]	[more]
KAA0050560.1	3.35e-32	72.59	acanthoscurrin-1-like [Cucumis melo var. makuwa] >TYK18800.1 acanthoscurrin-1-li...	[more]
XP_011659762.1	2.21e-30	74.05	glycine-rich protein 5 [Cucumis sativus]	[more]

BLAST of Csor.00g009360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H8T3	3.51e-60	100.00	acanthoscurrin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461135 PE=4 SV=1	[more]
A0A6J1KVV3	7.88e-53	91.43	acanthoscurrin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111498068 PE=4 SV=1	[more]
A0A5A7U5T7	1.62e-32	72.59	Acanthoscurrin-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94...	[more]
A0A0A0K9U1	1.07e-30	74.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G336450 PE=4 SV=1	[more]
A0A1S3CGR1	3.03e-29	71.54	acanthoscurrin-1-like OS=Cucumis melo OX=3656 GN=LOC103500553 PE=4 SV=1	[more]

BLAST of Csor.00g009360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34463:SF11	GLYCINE-RICH PROTEIN	coord: 1..129
None	No IPR available	PANTHER	PTHR34463	GLYCINE-RICH PROTEIN	coord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g009360.m01	Csor.00g009360.m01	mRNA