Csor.00g008920 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g008920
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	F-box protein
Location	Csor_Chr08: 558075 .. 560379 (+)
RNA-Seq Expression	Csor.00g008920
Synteny	Csor.00g008920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGAAATCGAGATGAGGTGACGAACGAAAAACGCATCCGGAGGAGGAGAGGCGGAGTACGCGGGTAGATGAAATTGAGATCGGGATCTCCTCATCAAAGAAATTGAGATTAAAAAAAAAAAAAAAAAGTGTTTTATTAAAGAGAAAATTATTATTTTAAGCCGTTCGAGTATTAATTTCAGAAAATATATTAAATATAAAATGAAAAAAAAAAAAATAGTTATTGCATTCGATTAAAATATTAAAAAAGTAATGTATATGAGATATATTGAAATATATTTTTAAAAATAAAAAATTGCAAACAATAATTAAAAAAAAAAAAAAAAGAAAAAAAAAAACAACGGTAATATTATGGGCCGGCAGGAGTTTGTTGTTGGCCCAATAGGGAATAAATGTCAATTTCTCTTACATTTTAAATTGTAGTCGTTGAATCGTGGTTTATCTTTCGTCGGATTTTCTGAGCGTGGTCTCTCTCTCTCTCTCCCTTGTTCTGATCTCGATTAAATCGGAAATTTCAACGATTCCGCCAGAATTTGAAGTGCGAAATTATTGATATCGACTAGGATCGCATTATCTCTTCACTCTACGTCATCAGATTCGGAGTAAAGTGTATTTTACTTCGTTTTCTCGGGCGTATGATCTCCTAGGGTTTGATCTCCATCTTTCTCTCTCTGTCTATCCAATTTTTATTCTCTTACAGCGATTTGCAAGATTGTATGGTTTTTCTGCATCATCATAAGTTTTGGCATTCGGTTGACTGTTAACCTTACCTACAAATTTCATTGAAGAACTCAGCGTTTCAAACTGGCAATGCCTATGAAACTTGGAAACGTATGGATGTTTCTTCTGCTACTGGAAACGCGATTTTCAAATTTTTTTTGCTTTCAATTTATTTTTCAGTTTATGATATTTTCTCTTGTGGAAGAGGTCTTTGAGTTCTAAAATTCTAAGACTTTTAACTGATTAGTGTTGATCAGAATTGGTAGATGAACTACTCAACGTTTGAGATATTCAATATTTCTTTTAATCCTCTCTTAAAGACTTTCGTTGTATATAGATGTACAATACACACAGCAAATGGCATGCAGCCCTCGCCACTAAAGTACGGAGATCATGTGTTAGTTCTGTGTAGCATTTTGTTCGCCTTCGAACAACTTATCTATTTGTTGTGTTTGTAGTTTGTATTTGAATGAGTAATCTATTTGAGTTTCCTCAGTTTAGCACGTGGTAGTTTTTATCTTTTTAATGAAAGCCTGTGGTAGTTTTTCTTTGAAACTCGTTCTATGGAGAATGTAAGTCATGGCTACCACTTTAATTCTCCAATGTAATTCATATGATCTTGTAGGTATTATTTGTTACTTTCTACTACAATGCTCTGTCTCCTCCTCTTGTGAAATTTTCCATCACAAATGTGACTGTTTTCAATATAATTTAAATTACAGTATCATCTTTCCTTGTAAATTGATCTAAATGTATTGTTCTGACTAGTCTTTGTGATTTATTGTTGCAGGATCCAATCCTTGCCCCTCTTGTTATACTACTTCTATTTGGAAAATGAGATGGGAAGAAATTTTGAAGGTGATTTTTCCGTTACTGGAAGGTGTGGACCTTGCTTCCTGCATGTTAGTGTGCAAGCAGTGGAGAGACATAGCTCGAGATGATTTCTTTTGGAAATGTTTGTGCGCCAAGAAGTGGCCTTCAACCTGCAAAAATCCCGATCCTCCGACCAATACCTACTATAAATTATATCAAAACTTTTACAAACGTCCCAATAATCGACGTCTTCTCCCTCCTCGACTTTCCTTTGATGATCTAGAGTTTTTTATTGACATTTGGAGTAAAGACAGATTAATCTTCTCAGAAGTAGTTGCAGGTCAAGTCCTCCAGAGTGGTATGAAGCCACCACCTGGTACTAGTAATGTGATTAATTATCACCTAGAAGCCCCAGAGTTCAAGATGACACTACCTGTTCAGCCAAGGTTCTCAATTCCTATATCCCATACTGTGAGCGTATCCGTGCTCGTAGGACGCAAGGATTCCAATAAAGTTGCTCGTATAGTCAACAAATCTGTATTTGATTACATTGATCGAACATCATACAGGACATTGGCTTTTGACTACCTTGATTTTTCACCTCTCTACCCATTTGTCTCCGGAATCCGAGCATGGATCTCATTGCTTTTCTTGGACGATGGAAATGATGGCATAATTGATGTTTTTGGAATTGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTTTGGACTTGCTTGATTGGAAATGA

mRNA sequence

ATGGCGAGAAATCGAGATGAGGTGACGAACGAAAAACGCATCCGGAGGAGGAGAGGCGGAATTCGGAGTAAAGTGTATTTTACTTCGTTTTCTCGGGCGTATGATCTCCTAGGGATCCAATCCTTGCCCCTCTTGTTATACTACTTCTATTTGGAAAATGAGATGGGAAGAAATTTTGAAGGTGATTTTTCCGTTACTGGAAGATTAATCTTCTCAGAAGTAGTTGCAGGTCAAGTCCTCCAGAGTGGTATGAAGCCACCACCTGGTACTAGTAATGTGATTAATTATCACCTAGAAGCCCCAGAGTTCAAGATGACACTACCTGTTCAGCCAAGGTTCTCAATTCCTATATCCCATACTGTGAGCGTATCCGTGCTCGTAGGACGCAAGGATTCCAATAAAGTTGCTCGTATAGTCAACAAATCTGTATTTGATTACATTGATCGAACATCATACAGGACATTGGCTTTTGACTACCTTGATTTTTCACCTCTCTACCCATTTGTCTCCGGAATCCGAGCATGGATCTCATTGCTTTTCTTGGACGATGGAAATGATGGCATAATTGATGTTTTTGGAATTGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTTTGGACTTGCTTGATTGGAAATGA

Coding sequence (CDS)

ATGGCGAGAAATCGAGATGAGGTGACGAACGAAAAACGCATCCGGAGGAGGAGAGGCGGAATTCGGAGTAAAGTGTATTTTACTTCGTTTTCTCGGGCGTATGATCTCCTAGGGATCCAATCCTTGCCCCTCTTGTTATACTACTTCTATTTGGAAAATGAGATGGGAAGAAATTTTGAAGGTGATTTTTCCGTTACTGGAAGATTAATCTTCTCAGAAGTAGTTGCAGGTCAAGTCCTCCAGAGTGGTATGAAGCCACCACCTGGTACTAGTAATGTGATTAATTATCACCTAGAAGCCCCAGAGTTCAAGATGACACTACCTGTTCAGCCAAGGTTCTCAATTCCTATATCCCATACTGTGAGCGTATCCGTGCTCGTAGGACGCAAGGATTCCAATAAAGTTGCTCGTATAGTCAACAAATCTGTATTTGATTACATTGATCGAACATCATACAGGACATTGGCTTTTGACTACCTTGATTTTTCACCTCTCTACCCATTTGTCTCCGGAATCCGAGCATGGATCTCATTGCTTTTCTTGGACGATGGAAATGATGGCATAATTGATGTTTTTGGAATTGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTTTGGACTTGCTTGATTGGAAATGA

Protein sequence

MARNRDEVTNEKRIRRRRGGIRSKVYFTSFSRAYDLLGIQSLPLLLYYFYLENEMGRNFEGDFSVTGRLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

Homology

[Close]

BLAST of Csor.00g008920 vs. ExPASy Swiss-Prot
Match: Q9FL82 (F-box protein At5g39250 OS=Arabidopsis thaliana OX=3702 GN=At5g39250 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.0e-51
Identity = 97/155 (62.58%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 68  RLIFSEVVAGQVLQSGMKP-PPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVL 127
           RL+FS ++ G  L++G++  P G SNV+  HL  P++KM +P +PRF+IP++ +VSVSVL
Sbjct: 98  RLVFSGLIPGVALENGIETLPLGISNVLRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVL 157

Query: 128 VGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFL---DD 187
           V R DS+KVARI+N+SVFDYIDR+SYR LAF+YLD SP YPF+SGIRAWISLLF+   D 
Sbjct: 158 VARNDSDKVARIINRSVFDYIDRSSYRALAFEYLDLSPCYPFISGIRAWISLLFMDVEDM 217

Query: 188 GNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 219
            +DG++DVFGI +DF D A+TK+EVLWLLD+LDWK
Sbjct: 218 NDDGLLDVFGIQLDFNDVADTKEEVLWLLDMLDWK 252

[Close]

BLAST of Csor.00g008920 vs. NCBI nr
Match: KAG6592901.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 436 bits (1122), Expect = 2.39e-154
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MARNRDEVTNEKRIRRRRGGIRSKVYFTSFSRAYDLLGIQSLPLLLYYFYLENEMGRNFE 60
           MARNRDEVTNEKRIRRRRGGIRSKVYFTSFSRAYDLLGIQSLPLLLYYFYLENEMGRNFE
Sbjct: 1   MARNRDEVTNEKRIRRRRGGIRSKVYFTSFSRAYDLLGIQSLPLLLYYFYLENEMGRNFE 60

Query: 61  GDFSVTGRLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHT 120
           GDFSVTGRLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHT
Sbjct: 61  GDFSVTGRLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHT 120

Query: 121 VSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLF 180
           VSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLF
Sbjct: 121 VSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLF 180

Query: 181 LDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 218
           LDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Sbjct: 181 LDDGNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 218

[Close]

BLAST of Csor.00g008920 vs. NCBI nr
Match: XP_023005069.1 (F-box protein At5g39250-like [Cucurbita maxima] >XP_023005070.1 F-box protein At5g39250-like [Cucurbita maxima] >XP_023005071.1 F-box protein At5g39250-like [Cucurbita maxima])

HSP 1 Score: 307 bits (787), Expect = 7.40e-103
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 68  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV 127
           RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV
Sbjct: 98  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV 157

Query: 128 GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG 187
           GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG
Sbjct: 158 GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG 217

Query: 188 IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 218
           IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Sbjct: 218 IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 248

[Close]

BLAST of Csor.00g008920 vs. NCBI nr
Match: XP_022959961.1 (F-box protein At5g39250 [Cucurbita moschata] >XP_022959962.1 F-box protein At5g39250 [Cucurbita moschata] >XP_022959963.1 F-box protein At5g39250 [Cucurbita moschata] >KAG7025307.1 F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307 bits (787), Expect = 7.40e-103
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 68  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV 127
           RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV
Sbjct: 98  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV 157

Query: 128 GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG 187
           GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG
Sbjct: 158 GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG 217

Query: 188 IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 218
           IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Sbjct: 218 IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 248

[Close]

BLAST of Csor.00g008920 vs. NCBI nr
Match: XP_023513418.1 (F-box protein At5g39250-like [Cucurbita pepo subsp. pepo] >XP_023513419.1 F-box protein At5g39250-like [Cucurbita pepo subsp. pepo] >XP_023513420.1 F-box protein At5g39250-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304 bits (779), Expect = 1.22e-101
Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 68  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV 127
           RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV
Sbjct: 98  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV 157

Query: 128 GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG 187
           GRKDSNKVA IVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG
Sbjct: 158 GRKDSNKVACIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG 217

Query: 188 IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 218
           IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Sbjct: 218 IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 248

[Close]

BLAST of Csor.00g008920 vs. NCBI nr
Match: XP_038883395.1 (F-box protein At5g39250 isoform X2 [Benincasa hispida] >XP_038883403.1 F-box protein At5g39250 isoform X2 [Benincasa hispida] >XP_038883411.1 F-box protein At5g39250 isoform X2 [Benincasa hispida] >XP_038883415.1 F-box protein At5g39250 isoform X2 [Benincasa hispida])

HSP 1 Score: 286 bits (732), Expect = 1.76e-94
Identity = 139/152 (91.45%), Postives = 148/152 (97.37%), Query Frame = 0


Query: 68  RLIFSEVVAGQVLQSGMK-PPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVL 127
           RLIFSEVV+GQVLQ+GMK PPPGT NV++YHLE PEFKMTLPV+PRFSIPISH+VSVSVL
Sbjct: 98  RLIFSEVVSGQVLQNGMKNPPPGTINVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVL 157

Query: 128 VGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGND 187
           VGRKDSNKVARIVNKSVFDYIDRTSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGND
Sbjct: 158 VGRKDSNKVARIVNKSVFDYIDRTSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGND 217

Query: 188 GIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 218
           G+IDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Sbjct: 218 GVIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 249

[Close]

BLAST of Csor.00g008920 vs. ExPASy TrEMBL
Match: A0A6J1KTX3 (F-box protein At5g39250-like OS=Cucurbita maxima OX=3661 GN=LOC111498169 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 3.58e-103
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 68  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV 127
           RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV
Sbjct: 98  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV 157

Query: 128 GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG 187
           GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG
Sbjct: 158 GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG 217

Query: 188 IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 218
           IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Sbjct: 218 IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 248

[Close]

BLAST of Csor.00g008920 vs. ExPASy TrEMBL
Match: A0A6J1H6B9 (F-box protein At5g39250 OS=Cucurbita moschata OX=3662 GN=LOC111460859 PE=4 SV=1)

HSP 1 Score: 307 bits (787), Expect = 3.58e-103
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 68  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV 127
           RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV
Sbjct: 98  RLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV 157

Query: 128 GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG 187
           GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG
Sbjct: 158 GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG 217

Query: 188 IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 218
           IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Sbjct: 218 IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 248

[Close]

BLAST of Csor.00g008920 vs. ExPASy TrEMBL
Match: A0A1S3BL55 (F-box protein At5g39250 OS=Cucumis melo OX=3656 GN=LOC103490854 PE=4 SV=1)

HSP 1 Score: 279 bits (713), Expect = 6.59e-92
Identity = 135/152 (88.82%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 68  RLIFSEVVAGQVLQSGMK-PPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVL 127
           RLIFSE V+G++LQ+GMK PPPGTSNV++YHLE PEFKMTLPV+PRFSIPIS+ VS SVL
Sbjct: 98  RLIFSEAVSGRILQNGMKSPPPGTSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVL 157

Query: 128 VGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGND 187
           VGRKDSNKVARIVNKSVFDYIDRTSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGND
Sbjct: 158 VGRKDSNKVARIVNKSVFDYIDRTSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGND 217

Query: 188 GIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 218
           G IDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Sbjct: 218 GAIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 249

[Close]

BLAST of Csor.00g008920 vs. ExPASy TrEMBL
Match: A0A5A7TI25 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00800 PE=4 SV=1)

HSP 1 Score: 279 bits (713), Expect = 6.59e-92
Identity = 135/152 (88.82%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 68  RLIFSEVVAGQVLQSGMK-PPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVL 127
           RLIFSE V+G++LQ+GMK PPPGTSNV++YHLE PEFKMTLPV+PRFSIPIS+ VS SVL
Sbjct: 98  RLIFSEAVSGRILQNGMKSPPPGTSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVL 157

Query: 128 VGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGND 187
           VGRKDSNKVARIVNKSVFDYIDRTSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGND
Sbjct: 158 VGRKDSNKVARIVNKSVFDYIDRTSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGND 217

Query: 188 GIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 218
           G IDVFGIVMDFCDAANTKDEVLWLLDLLDWK
Sbjct: 218 GAIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 249

[Close]

BLAST of Csor.00g008920 vs. ExPASy TrEMBL
Match: A0A6J1CT74 (F-box protein At5g39250 OS=Momordica charantia OX=3673 GN=LOC111014108 PE=4 SV=1)

HSP 1 Score: 270 bits (689), Expect = 2.92e-88
Identity = 133/151 (88.08%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 69  LIFSEVVAGQVLQSGMK-PPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLV 128
           LIFSEVV GQVLQ+G+K PPPGTSNV+  HLEAPEFKMTL V+PRF+IP+ HTVSVSVLV
Sbjct: 99  LIFSEVVPGQVLQAGIKVPPPGTSNVLRCHLEAPEFKMTLLVEPRFTIPLCHTVSVSVLV 158

Query: 129 GRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDG 188
           GRKDSNKVARIVNKSVFDYIDRTSYR LAFDYLDFSPL+PFVSGIRAWISLLFLDDGNDG
Sbjct: 159 GRKDSNKVARIVNKSVFDYIDRTSYRALAFDYLDFSPLHPFVSGIRAWISLLFLDDGNDG 218

Query: 189 IIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 218
           ++DVFGIVMDF DAAN+KDEVLWLLDLLDWK
Sbjct: 219 VLDVFGIVMDFNDAANSKDEVLWLLDLLDWK 249

[Close]

BLAST of Csor.00g008920 vs. TAIR 10
Match: AT5G39250.1 (F-box family protein )

HSP 1 Score: 203.8 bits (517), Expect = 1.5e-52
Identity = 97/155 (62.58%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 68  RLIFSEVVAGQVLQSGMKP-PPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVL 127
           RL+FS ++ G  L++G++  P G SNV+  HL  P++KM +P +PRF+IP++ +VSVSVL
Sbjct: 98  RLVFSGLIPGVALENGIETLPLGISNVLRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVL 157

Query: 128 VGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFL---DD 187
           V R DS+KVARI+N+SVFDYIDR+SYR LAF+YLD SP YPF+SGIRAWISLLF+   D 
Sbjct: 158 VARNDSDKVARIINRSVFDYIDRSSYRALAFEYLDLSPCYPFISGIRAWISLLFMDVEDM 217

Query: 188 GNDGIIDVFGIVMDFCDAANTKDEVLWLLDLLDWK 219
            +DG++DVFGI +DF D A+TK+EVLWLLD+LDWK
Sbjct: 218 NDDGLLDVFGIQLDFNDVADTKEEVLWLLDMLDWK 252

The following BLAST results are available for this feature:

BLAST of Csor.00g008920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FL82	2.0e-51	62.58	F-box protein At5g39250 OS=Arabidopsis thaliana OX=3702 GN=At5g39250 PE=2 SV=1	[more]

BLAST of Csor.00g008920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6592901.1	2.39e-154	100.00	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023005069.1	7.40e-103	100.00	F-box protein At5g39250-like [Cucurbita maxima] >XP_023005070.1 F-box protein At...	[more]
XP_022959961.1	7.40e-103	100.00	F-box protein At5g39250 [Cucurbita moschata] >XP_022959962.1 F-box protein At5g3...	[more]
XP_023513418.1	1.22e-101	99.34	F-box protein At5g39250-like [Cucurbita pepo subsp. pepo] >XP_023513419.1 F-box ...	[more]
XP_038883395.1	1.76e-94	91.45	F-box protein At5g39250 isoform X2 [Benincasa hispida] >XP_038883403.1 F-box pro...	[more]

BLAST of Csor.00g008920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KTX3	3.58e-103	100.00	F-box protein At5g39250-like OS=Cucurbita maxima OX=3661 GN=LOC111498169 PE=4 SV...	[more]
A0A6J1H6B9	3.58e-103	100.00	F-box protein At5g39250 OS=Cucurbita moschata OX=3662 GN=LOC111460859 PE=4 SV=1	[more]
A0A1S3BL55	6.59e-92	88.82	F-box protein At5g39250 OS=Cucumis melo OX=3656 GN=LOC103490854 PE=4 SV=1	[more]
A0A5A7TI25	6.59e-92	88.82	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00800...	[more]
A0A6J1CT74	2.92e-88	88.08	F-box protein At5g39250 OS=Momordica charantia OX=3673 GN=LOC111014108 PE=4 SV=1	[more]

BLAST of Csor.00g008920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39250.1	1.5e-52	62.58	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044207	F-box protein At5g39250-like	PANTHER	PTHR47722	EXPRESSED PROTEIN	coord: 62..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g008920.m03	Csor.00g008920.m03	mRNA