Csor.00g008670 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g008670
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr08: 741294 .. 741936 (-)
RNA-Seq ExpressionCsor.00g008670
SyntenyCsor.00g008670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTATGGTCAATGTCTGTCACAGATACATGTACGAGGAGTTCACATCAAGGTCATGTGTTAAATCCAACGGTGTTGATGTGCAGAATTCATAGAAATAGGGTTTTGTGAGACAACATTTCTGGAAGTGAAAAACCAGGTGGGTTTTCTCTAAATCTACCCCTAAATTTTTGTCTTATTACACTATTTACCCTTGCAATTTAGTCCCTCATTTCTCTCTTCTTTTTATATCCCCCACCATCTCTATCCCCATTCCATCCTCTTCTTCCTCCTCGGTTCTCTCTCGGGTCTTAGGGTTTCGTCGATTTCTTTTTGAGGGGAATGTTGTCTGGCTCGAGGACGCTTTTCTTAACCCTCTTAGTTTCAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTAATTCCACCGCCCCTCAACGACAGTAACGACGACGACGACGACAACGAGGTTCGGGTCTTCTTTTAAAAATTTCCATTTTTGGGTATGGATTTTTATGAGACTATAATGTTTGGAAGTGAATTAATTAAGATGGGTTGGTGCAGATTGGTGTGATGATGAAGCTCCTTTTTGACTTTCAGTTGGGAGTCTGCCCAAAATCCCCTCTTTCTTCATCATTATTGGCTCTTTTTTTGCCCTCTTAG

mRNA sequence

ATGGTTATGGTCAATGTCTGTCACAGATACATGTACGAGGAGTTCACATCAAGGCTTCATTCCCCCCAATTAATTCCACCGCCCCTCAACGACAGTAACGACGACGACGACGACAACGAGATTGGTGTGATGATGAAGCTCCTTTTTGACTTTCAGTTGGGAGTCTGCCCAAAATCCCCTCTTTCTTCATCATTATTGGCTCTTTTTTTGCCCTCTTAG

Coding sequence (CDS)

ATGGTTATGGTCAATGTCTGTCACAGATACATGTACGAGGAGTTCACATCAAGGCTTCATTCCCCCCAATTAATTCCACCGCCCCTCAACGACAGTAACGACGACGACGACGACAACGAGATTGGTGTGATGATGAAGCTCCTTTTTGACTTTCAGTTGGGAGTCTGCCCAAAATCCCCTCTTTCTTCATCATTATTGGCTCTTTTTTTGCCCTCTTAG

Protein sequence

MVMVNVCHRYMYEEFTSRLHSPQLIPPPLNDSNDDDDDNEIGVMMKLLFDFQLGVCPKSPLSSSLLALFLPS
Homology
[Close]
BLAST of Csor.00g008670 vs. NCBI nr
Match: KAG6592926.1 (hypothetical protein SDJN03_12402, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147 bits (372), Expect = 1.09e-44
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MVMVNVCHRYMYEEFTSRLHSPQLIPPPLNDSNDDDDDNEIGVMMKLLFDFQLGVCPKSP 60
          MVMVNVCHRYMYEEFTSRLHSPQLIPPPLNDSNDDDDDNEIGVMMKLLFDFQLGVCPKSP
Sbjct: 1  MVMVNVCHRYMYEEFTSRLHSPQLIPPPLNDSNDDDDDNEIGVMMKLLFDFQLGVCPKSP 60

Query: 61 LSSSLLALFLPS 72
          LSSSLLALFLPS
Sbjct: 61 LSSSLLALFLPS 72

[Close]
BLAST of Csor.00g008670 vs. NCBI nr
Match: KAG7025333.1 (hypothetical protein SDJN02_11828, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144 bits (362), Expect = 3.66e-43
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MVMVNVCHRYMYEEFTSRLHSPQLIPPPLNDSNDDDDDNEIGVMMKLLFDFQLGVCPKSP 60
          MVMVNVCHRYMYEEFTSRLHSPQLIPPPLNDSNDDDD++EIGVMMKLLFDFQLGVCPKSP
Sbjct: 1  MVMVNVCHRYMYEEFTSRLHSPQLIPPPLNDSNDDDDNDEIGVMMKLLFDFQLGVCPKSP 60

Query: 61 LSSSLLALFLPS 72
          LSSSLLALFLPS
Sbjct: 61 LSSSLLALFLPS 72

The following BLAST results are available for this feature:
BLAST of Csor.00g008670 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g008670 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6592926.11.09e-44100.00hypothetical protein SDJN03_12402, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7025333.13.66e-4397.22hypothetical protein SDJN02_11828, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g008670 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g008670 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g008670.m01Csor.00g008670.m01mRNA