Csor.00g008310 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g008310
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionMADS-box protein 04g005320-like
LocationCsor_Chr08: 997472 .. 1004974 (+)
RNA-Seq ExpressionCsor.00g008310
SyntenyCsor.00g008310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCATTGGAGGAGGAAAGAAGTTTATCAATGGCCATGGAAACAAAAGAGATGAAAATTCCTCCTACGTCCATAACATAGCAAGAGGAGTTTATAGAGTGACGATGAAGATGGATAAGGATATTGAGAAGTAAGGAGTATTATTCCTTCTTTCTCCAATCTTTACGCCACTAGTCGTCTCTAGATCAAGTAAATACTTTTAGTAAACTCTTACCGAGGATCTATGGTCATGAAGGTACGTGTGAGACCAATGTGTGCCTGGTCACAAGCTTATATAAGATTATTTATATGCTAAAATCTTGGCAGATAGTTGAAGAAAGCTCTCCCTAGCACCCTTTTCTAGTTTTCATGGTCCTCATTGTTGGAAGGAAAATTTTAGACAAGCTAATGGGACCATCGAGGATTATAAGCAAAGAAAGAAGGGGTGATTTTCATGATTAATTTTGACGATTATGACAATGTGGATTGAAACTTCGAAGTGACTTTTAGTAATAGCTTGAGGCCACCGTTAGCAAATATTGTCCACTTTGGTCTGTTATGTATCGTTGCCACCCTTATAAGGAATGTTTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCACCCCACTTGGGGGCCAGCGTCCTCGCTGGCACACTGCTAGAAGACATTGTCTGCTTTTGCCCGCTACATATCGCCACCAGTCTCATGGTTTTAAAACGTGTCTGTTGGGGAATGGTTTCCACACCTTTGTAAGGAATGCTGCATTCCCCTCTCCAATCGATGTGGGATCTCATAATCCACCCCCCCCCCTCGGGGGCCAGCGTTATCTCTAGCACACTTCCCGATTTCTGGCTATGATATCGTTTGTAACGGCTCAAAGCCACCGCTAGTAGATATTGTCTGCTTTGACCCGTTACGTATCGCCATTAGCTTTAAGGTTTTAAAACGCATCTGTTAGGGAGGGGTTTTCATACCCTTATAAGGAATGTTTCATTCCCTTCTCCAACCGATGTGGGATCTCACAATTCATCCCCTTTGGGGGTCTGTGTTCTCGTTGGCACAATGCTCGATGTCTAGTTTTGATACATTTGTAACGGCCCGAGGCCACTTCTAGCAGATATTTTCCGTTTTAGCCATTGCGTACCACTGTCAGCCTCAAGGTTTTAAGACGCATCTATTGGGAAAAAGTTTCCACACCCTTATGAAGAATGCTTTGTTCCTCTCTCCAACCGATGTGGAATCTCACATTTTCAAGGTTGATTTTGACAAAACTCATGATCTTGTTGACAAAAACTTCGGGAAGAAGGGTTTGGACGAAAATGGAGATCTTCTATTTGAGATTGCATTAGGTCTACAAATTTCTCCATCTATTCTCAACTAAAAGCCTGTGTAAGATTTTTGCTTCTAATGGGGCTTAAGCAAGGGAGCCCTTTCGCCCTTTTTCTTTTTACCTAATGGTGGATGTTTGTAGTAGTAGGTTAGTGTCGCTTTGAGAGGAGAAGGGATTCAAGGTGAGAAAAGAGTTAGTTCACTTGCCTCATCTCTTCTTCTATTCAAGATTGGAAAATTCCTCTAGGAACCTTCATCGTTCTTTTTCCTTCGAAGCAAATTCTAGGCTTAAGGTTAATGGGGTAGAAGTTTCATATTTGGCCTTTAATGGTTGGCCTTTAATTGTTGTCCTTCTAAGCTATGTTTTGGGACGTCTTTGGTCGAGTGTAAGGTGGGTCATAGCTTAAAAGGACAACTAACGCCAAATATGAAACTTCTGCCCCCATTAATTTTAAGTATGTTCTGGGGCTCCTTTGGTTGCGTGTGAGGTGGGTCAGTTTCCCTCCTATATTCTGTTGGGTGATACTCAGAGGAGCCAAGTGGAATTTGGAAATGGTTTGCCTTACATGAGAAATGTTTTTTTTTTTCTTTTTTCCCCTAAAGGAAGGCTTACTCTTTACCCTATCAATGTTGAGTGAGATACCCACTTATCTCATCTCTTTTTAGATTGTGGGTTTTACGGAGTAAGAATATTAAGAGAGTGATAAGAAACTTCTTTGTGGAAAAGGGTGAATGATAAGAAACTTCTTTGTGGAAAAGGGTAGATGAGGAGATGGTCCAATCTAGTTAAGTGGAAAAAGTGATGATTATGCATGTGGAGTAAGGAGGCCTCGGGATTGAGAACTTGAGATTATATAACAAGACCCTGTTGGCTAAATGGTTGCGATGATTCTAAATAGAGTTCAATGCTTTGTGACACAAAGTTATTGTGAGCATGCATGGCCCACACCCTTTCAAGTGAGTCTAAGTGAGTGACAGATGATGACGCCAAAGGGCCTAATAAAAAGGCCCACACCCTTTCAAGTGAGTGACAGATGATGAAAGGGCCTAATAAAAATCTTTAGAAAGCTGAGTGTCTAAGGTTTCTCTTCCTCTATTAGGGAGGGACTGAGGGACTGAGTGTTTATTATTGGGAAGATTGGTAAGTGGGTAATCAACCCCTTTGTGAATTTTTCATGCGCTTATATTATCTCTGGAGTAAGATTTCATTTTGTGGCTTCTATCTTACCGTTCCCATATCCCTGTTCATTCTCCTTGGGTTTTAAGTGCCACATTTCTACTAAATAGGAATTATAGATGCAGCACGTCTCCTTTCTCTTCTCCTTTATCAACATGCGTTTTGACGAAGGGACCGTGTTTCCTCAAATTCTTCCTCTTGGAGTTCTTTTTTCATATAATGTGTCCTTTCTCCGCCCCAAATCACCTCTACTTTCCACTCTCTTTAGAAGGTTAAAATCTCTATGAATGTTGAATTTTTTAATCTTCTTTTGAGTTTATCCCATAATCCTCATCATTAGTTGTGAGAGACTAGTTTGTTCAATCTGTTTCTCTGGTTTCAATGCTAGTTTTGTTTAGCTTATGTTCGGTGTAGAATTGTGGTTGTTATGCTATGATTGAGGTTATAAGAACATTCCTGTACTTGCCTTATCATCTTACATCTGCCTGTGTTATATGAGTAAGGATTCTTGCTTTTCTTTTGGTCGCCCTTTCTGTATACCCATGACATCTATAAAGGATAGAGTTGAAGATTCTTCGTCTTCTTACTAATATTTATTTAGGATACCATAAAGATCCTCCCCCTGGTGTTCAAAGGATTTTCTTTTTCCAAGTTTGAAGCTTATATAACGGATATGATTGATAAACCAATTGAATGTTCTTATGGCCAGTGGATATAGATGTATTTCTGTATTAAAGAAATGAGGATAACACTTATAACGGTAGTTACGTGCATCATTTTCTTGGAACCAACTTTTTTATGCACTTCCGTAATTGCGATGCAGCTTATTGAATATTATTAAGCGCTACCAAAGCCACTTTGAAGGGAGAAGTCAAAGTCAAAGTCAAAATGAGGTTGATACAAAGGTCAGTGAGCAACTTTTTTAACCTTTTTCTTACAAATATAAACCTCTAATCTTATTTCTGCTGAGTTTTATGCAGGAGCATGAAGAATCTGAAGAGACACTCATGGTGTCATTTGGAAAGCTCCTACAAACTATTCAAAGGCAATTTTCTTTCTATATTTGAACTGGTCGTTTTTAGGTATCACAATTGCTCTATCTTGACTGACGTGTCCTCATTTCCAGTCATGTTGAAGAACCAGATTTCAAAAAGCTCAATGTAAATGATATGGTGCACCTGGAGAATCAACTTGAAGCCTCACTTGACAAAATCAAATCTCAAAGAGTGAGTTCACTTGTTTGGCTAGAATATTCATCTAAGATATTTCCACTTGTTTGGCTAGAATATTCATCTAAGATATTTCCACTTGTTAAGTACACAATACTTTTGGCAGCACCACGTGCGTGTCCTGCGGATGTGGCAGATGAGTTGTTTGTTAAATACTTCAAACTACTCGACAAAGAGGATATTCTTAGTGATTGTGGTGCTAGATTTACACAGAGGTTTTGGACTAGCCTACTCAATGCACTAGGTTCCTCTCCATAGCAAATCACCCACTAGCCTCGTGAAAAAATAAATCCTATGGTCTTTAGTTGCGATGTCACCATCAACCGTAATGAAGTACCTTGCCTTTATGAGAGTAGCACATGCCTTGAATATTGTGGTCAGGAAATGAAAACGCATTCAACTATAATTAGGAACCTATCATTTAGAGATAGCCTCCGATCCGAACAAATTAGATGTGTGGTACTTCCCTACACAAACCCACGGGTGCAAGCGTGGGCACCAGGCAGGCTCACACACCCCATGAGCCTGCATGGTCAAGCTAGTTGGTTGTGCAGGCTAGTTGGTTGTAACCGGCCATCCAGAGGTACATCAACCTCGTAGATCATGCAAAGCATGATAGTCATTATCATCATAGTGTACGCGTCTATACTCATCATAAAAGGGATATGAATTTGGTCCCTATATTTAATCTTAAATCATTCATGCGACACAACCCCAAATATCTTTCACATATTACCCTAACTAACATGCATGCATAAACTTTCATATATTCATCTTCCTAACATACTTACGGGTTGTGTATCAACAAAAAAAAACTTTTCATTTTCATAATGCAATATGGCATCTCATACATGCATATCATCGTAACACAAGATATCATTATACTATATCACATCATCATAACGTATCATGGTATCATAGCATGTTACATCATCATAACGTATGATGGTATCATAGCGCATCACATCATCATAACATCATAGCATATCAGATCATCATAACATATTATAGCATTAACATACATCATAACAACATACATGACACGTGCAGTGGTCACTGAACACGTGTCATCATACATAAGACAAGTCTTCCGACCAAGCCAATAGTAAGCCCACTTACTTGGTTGGCCTAGGCCGAAGTTACCACGACACCTTGATGCTTGATGCTGGCTTAACGCTGCTCTCTGAAATAATTAAACCTAATTTTTCATAAAATAATTTAAACTAGCTAAAAGGTAGTTATCCTAACCTTAAGCACTTTCAAAGAGCTAAAACTAATAGAAAAAAGTCCGAGTATATCAAACCCAGGCCAAATCAACCAAAATGCCAGCCTGAAGAGTGTGTTCTTTGATTGGTTTCAAACCGTTCAAGTGGGATGATGAAATGAAGCAAGAGACCTCCCTTTTATAGTAGAGGTCAAACTTAAGTGATGTGGGACAATTTCCCTTCCTCTTCTTTCAAAGTTAGTGACCGAACAACATACTCTATGTCCTTAAGAGGTAACAAAAGGACACACACGAGGAAGAAGGTGTCCAACTGCTTATCATTTCGTTGGTGACAAGTAGAAAATGGGCTTAACTTGAGACAACTTGGAGAAAGCTGCATGTAAAATTGAATGAAATACTCAAACAAGGGAAGACGACCTTGGACTTCAAGGTAGAAGCACAGTTTAGGTGAGATTGCATATGTGGAATAAACTATGCGACAAGCGTGCACAAAGTGCACAAAAGCCTTAGTGTTGAGGTATGACAGACCCTTTGAAGTGATCAAACAAGTGCACAATGTGGCTTATCATCTGAAACTTCCCAACAAGTTGAAAATTGACCAGGATCAAAACAAGTAAGGTGAGTTCCAACTATGATTAAAAAGTGGTTTGAGAGGAAGATTGAGAAAATCCTTGGCCATTAAACAATTGTCAACGGACTGATTACTTGGTAAAATGGAAAGGCGAAGATGACAGAGAGCTTTCTTGGGATAGAGATGTGACACTGACAATTTGAAGACTAGATATGAGTGCTAGTTAAGGATAGATCCAATGAAGGCATCGACAAGCTCAAGGGAAGGAGGTTTGTTAGGAGATCTCGATCTTGAAACATGCGAGATGGGACTTACATGAGTTAGTGACACGGTGTGTGGGGCAACACACTAAAGAGCAAAAGACAAGGCAGACAAGTACACAAAGGTGGTAAGGGACTAAACATACCTTGGATGTTGATGGGTGGTCGGAAATCCACGATTGTGAAGGGGCATGGTTACCGTCCTGCTTAGCACACAATCATTGTTGGCGAGTAGGCAGGAAGACATGCACGACAAAACAAGGCAAAAGCAAGAAGACATGGCAAACATAAAGTACGAAACTTCCATGAGCTGACAGCAATATGACATGAACACATGGTACAAAACATGCGTGCACACAAAGAATCTCATAGGTATGCGCATACGCACATCCAGATGCATAGGCTCACATGCTTAAGCCTAACGTAACGTGCAAGGAGGATTGAACGGCAATCCGGCAAGCAAAGCACTATTAATGGGCTCATTAATAGGGGTAGACCGTTCACAAAGAGGATTAACAAAGGCATCTGATTCCCCAAGTTTTTGGAGTAATAAAGACAATTCCTCTTTTTCATAACTCAAGCACGCATAATTCCCAACCTTTATGGAGATTTTCTCTATCCTGTCCTCATCTTTACATGGTCATATGCTTTGAGGTATCTGATCTTTGTGTTCAAGCCATTCACAAAGTTTCTTTCCTGCTCTAAGTTAGGTACGTTTGGTAATAACGGTTCCCTAGATGAAAAACTCAAAAAGGGAAGATACCTAAAATGGTTCTACCCTGAAAAATGCTTGTACATGGTTCCTTCAAGTTCAGATAAGTTCTTCTGTACCCATCTAAATCATGCTCCTGCTTTCATAGATATCAGGGCTCAAATATAACATTTTACAGCCAACTCCTTCATAAATGGGTGTGCAAAAGAAGAAAAAGAAAAAAGAAAGAACTCTACATTAATTACAGAATGAAAACAGTTCTCTTTTCTCCATCACTGTCAAAACGCCTGACAATCACATTGATATTAGTGGTGATTGTAAATGAGGAAGGGGGTGAGAACTAGAAACCACCCAATTCTCAATTTTGTACGGAAACATGCATCCAACGAAGCCCTCCACTACATTTGATCAGCTTCTCAAGCTTGAAGAGGAGTACTAACTACCTGATCCTGTGTTAACTGACTCTTAAGGCTGCACTTTTCTTCTGAGCAGAAGCTCAAAGCATTCTATAACTAACTACTACTTGATCCTCAAGTGTATTGAATTGACATATAGTTCAGTGGAAATTATAGACTTCTCCATACATGAAATTGAAATCAGTTGGCACATGCTGTAGTATCAGTTACTAAGAAACTCCTAAAAAATAATTTCAGAAAAATAGACGAATATGTAAATATAGGAAGATACACTACCTGATTTTCCAATATGTGGAGTGGTTCCAATGAATGCTTACTTATGCACTCTTGTTCGGGAAGTAAGGGGAATTGTATGAGATTATGCTTCTGCTTTTGCTTCATCGTTCTGATTCTAGATGAACAGGGGGATAAAATCCTGATACTAATGATGATTTTCCAGTGAGGAAGCTAATGTTACATTGACTAGCTATCATATTAGCGGAAAAAAAAAAATTGTAATAGCTATCTTTTTACTTGCAGGTTGAGGCAATGATGGAAAATAGCAGTTGGATAGACAACATGGATATGGCTATTGCCATGGTCGACAGCCAACTTTAA

mRNA sequence

ATGCTCATTGGAGGAGGAAAGAAGTTTATCAATGGCCATGGAAACAAAAGAGATGAAAATTCCTCCTACGTCCATAACATAGCAAGAGGAGTTTATAGAGTGACGATGAAGATGGATAAGGATATTGAGAACTTATTGAATATTATTAAGCGCTACCAAAGCCACTTTGAAGGGAGAAGTCAAAGTCAAAGTCAAAATGAGGTTGATACAAAGGAGCATGAAGAATCTGAAGAGACACTCATGGTGTCATTTGGAAAGCTCCTACAAACTATTCAAAGTCATGTTGAAGAACCAGATTTCAAAAAGCTCAATGTAAATGATATGGTGCACCTGGAGAATCAACTTGAAGCCTCACTTGACAAAATCAAATCTCAAAGAGTTGAGGCAATGATGGAAAATAGCAGTTGGATAGACAACATGGATATGGCTATTGCCATGGTCGACAGCCAACTTTAA

Coding sequence (CDS)

ATGCTCATTGGAGGAGGAAAGAAGTTTATCAATGGCCATGGAAACAAAAGAGATGAAAATTCCTCCTACGTCCATAACATAGCAAGAGGAGTTTATAGAGTGACGATGAAGATGGATAAGGATATTGAGAACTTATTGAATATTATTAAGCGCTACCAAAGCCACTTTGAAGGGAGAAGTCAAAGTCAAAGTCAAAATGAGGTTGATACAAAGGAGCATGAAGAATCTGAAGAGACACTCATGGTGTCATTTGGAAAGCTCCTACAAACTATTCAAAGTCATGTTGAAGAACCAGATTTCAAAAAGCTCAATGTAAATGATATGGTGCACCTGGAGAATCAACTTGAAGCCTCACTTGACAAAATCAAATCTCAAAGAGTTGAGGCAATGATGGAAAATAGCAGTTGGATAGACAACATGGATATGGCTATTGCCATGGTCGACAGCCAACTTTAA

Protein sequence

MLIGGGKKFINGHGNKRDENSSYVHNIARGVYRVTMKMDKDIENLLNIIKRYQSHFEGRSQSQSQNEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKKLNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL
Homology
[Close]
BLAST of Csor.00g008310 vs. NCBI nr
Match: KAG6592962.1 (hypothetical protein SDJN03_12438, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293 bits (749), Expect = 1.10e-99
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 1   MLIGGGKKFINGHGNKRDENSSYVHNIARGVYRVTMKMDKDIENLLNIIKRYQSHFEGRS 60
           MLIGGGKKFINGHGNKRDENSSYVHNIARGVYRVTMKMDKDIENLLNIIKRYQSHFEGRS
Sbjct: 1   MLIGGGKKFINGHGNKRDENSSYVHNIARGVYRVTMKMDKDIENLLNIIKRYQSHFEGRS 60

Query: 61  QSQSQNEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKKLNVNDMVHLENQLEASLD 120
           QSQSQNEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKKLNVNDMVHLENQLEASLD
Sbjct: 61  QSQSQNEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKKLNVNDMVHLENQLEASLD 120

Query: 121 KIKSQRVEAMMENSSWIDNMDMAIAMVDSQL 151
           KIKSQRVEAMMENSSWIDNMDMAIAMVDSQL
Sbjct: 121 KIKSQRVEAMMENSSWIDNMDMAIAMVDSQL 151

[Close]
BLAST of Csor.00g008310 vs. NCBI nr
Match: XP_023514206.1 (MADS-box protein 04g005320-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204 bits (518), Expect = 3.17e-64
Identity = 106/109 (97.25%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 43  ENLLNIIKRYQSHFEGRSQSQSQNEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKK 102
           ++LLNIIKRYQSHFEGRSQSQSQNEVDTKEHEESE+TLMVSFGKLLQTIQSHVEEPDFKK
Sbjct: 61  DSLLNIIKRYQSHFEGRSQSQSQNEVDTKEHEESEDTLMVSFGKLLQTIQSHVEEPDFKK 120

Query: 103 LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL 151
           LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL
Sbjct: 121 LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL 169

[Close]
BLAST of Csor.00g008310 vs. NCBI nr
Match: XP_022959860.1 (truncated transcription factor CAULIFLOWER D-like [Cucurbita moschata])

HSP 1 Score: 202 bits (515), Expect = 9.07e-64
Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 0 

Query: 43  ENLLNIIKRYQSHFEGRSQSQSQNEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKK 102
           ++LLNIIKRYQSHFEGRSQSQS NEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKK
Sbjct: 61  DSLLNIIKRYQSHFEGRSQSQSPNEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKK 120

Query: 103 LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL 151
           LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL
Sbjct: 121 LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL 169

[Close]
BLAST of Csor.00g008310 vs. NCBI nr
Match: KAG7025373.1 (hypothetical protein SDJN02_11868, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192 bits (489), Expect = 5.55e-60
Identity = 108/157 (68.79%), Postives = 121/157 (77.07%), Query Frame = 0 

Query: 1   MLIGGGKKFINGHGNKRDENSSYVHNIARGVYRVTMKMDKDIENLLNIIKRYQSHFEGRS 60
           MLIGGGKKFINGHGNKRDENSSYVHNIARGVYRVTMKMDKDIEN      + +   + + 
Sbjct: 1   MLIGGGKKFINGHGNKRDENSSYVHNIARGVYRVTMKMDKDIENATKATLKGEVKVKVKM 60

Query: 61  QSQSQNEVDTKEH-----EESEETLMVSFGKLLQTIQ-SHVEEPDFKKLNVNDMVHLENQ 120
           +   ++  + K H     E S +    +F  + + +  SHVEEPDFKKLNVNDMVHLENQ
Sbjct: 61  RLIQRSMKNLKRHSWCHLESSYKLFKGNFLSIFELVVFSHVEEPDFKKLNVNDMVHLENQ 120

Query: 121 LEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL 151
           LEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL
Sbjct: 121 LEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL 157

[Close]
BLAST of Csor.00g008310 vs. NCBI nr
Match: XP_023004227.1 (MADS-box protein 04g005320-like [Cucurbita maxima])

HSP 1 Score: 189 bits (481), Expect = 1.26e-58
Identity = 101/109 (92.66%), Postives = 106/109 (97.25%), Query Frame = 0 

Query: 43  ENLLNIIKRYQSHFEGRSQSQSQNEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKK 102
           ++LLNIIKRYQSHFEGRS+SQ  NEVDTKE+EES+ETLMVSFGKLLQTIQSHVEEPDFKK
Sbjct: 61  DSLLNIIKRYQSHFEGRSESQ--NEVDTKENEESDETLMVSFGKLLQTIQSHVEEPDFKK 120

Query: 103 LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL 151
           LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWID MDMAIAMVDSQL
Sbjct: 121 LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDKMDMAIAMVDSQL 167

[Close]
BLAST of Csor.00g008310 vs. ExPASy TrEMBL
Match: A0A6J1H7I9 (truncated transcription factor CAULIFLOWER D-like OS=Cucurbita moschata OX=3662 GN=LOC111460798 PE=4 SV=1)

HSP 1 Score: 202 bits (515), Expect = 4.39e-64
Identity = 106/109 (97.25%), Postives = 108/109 (99.08%), Query Frame = 0 

Query: 43  ENLLNIIKRYQSHFEGRSQSQSQNEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKK 102
           ++LLNIIKRYQSHFEGRSQSQS NEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKK
Sbjct: 61  DSLLNIIKRYQSHFEGRSQSQSPNEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKK 120

Query: 103 LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL 151
           LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL
Sbjct: 121 LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL 169

[Close]
BLAST of Csor.00g008310 vs. ExPASy TrEMBL
Match: A0A6J1KPU7 (MADS-box protein 04g005320-like OS=Cucurbita maxima OX=3661 GN=LOC111497621 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 6.11e-59
Identity = 101/109 (92.66%), Postives = 106/109 (97.25%), Query Frame = 0 

Query: 43  ENLLNIIKRYQSHFEGRSQSQSQNEVDTKEHEESEETLMVSFGKLLQTIQSHVEEPDFKK 102
           ++LLNIIKRYQSHFEGRS+SQ  NEVDTKE+EES+ETLMVSFGKLLQTIQSHVEEPDFKK
Sbjct: 61  DSLLNIIKRYQSHFEGRSESQ--NEVDTKENEESDETLMVSFGKLLQTIQSHVEEPDFKK 120

Query: 103 LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDNMDMAIAMVDSQL 151
           LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWID MDMAIAMVDSQL
Sbjct: 121 LNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWIDKMDMAIAMVDSQL 167

[Close]
BLAST of Csor.00g008310 vs. ExPASy TrEMBL
Match: A0A6J1DPA0 (MADS-box transcription factor 8-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111022564 PE=4 SV=1)

HSP 1 Score: 125 bits (313), Expect = 4.42e-33
Identity = 65/98 (66.33%), Postives = 80/98 (81.63%), Query Frame = 0 

Query: 44  NLLNIIKRYQSHFEGRSQSQSQNEVDTK---EHEESEETLMVSFGKLLQTIQSHVEEPDF 103
           +LLNII+RYQSH +G+SQSQS  ++DT    +  +S +T++VS GKLLQTIQS VEEPDF
Sbjct: 101 SLLNIIERYQSHLKGKSQSQSPIDIDTNASDQDHQSNQTILVSLGKLLQTIQSQVEEPDF 160

Query: 104 KKLNVNDMVHLENQLEASLDKIKSQRVEAMMENSSWID 138
           KKLNV +M+ LENQLEA+LDKIK QR+EAMMEN  W D
Sbjct: 161 KKLNVTEMMQLENQLEATLDKIKIQRIEAMMENDCWTD 198

[Close]
BLAST of Csor.00g008310 vs. ExPASy TrEMBL
Match: A0A0A0KFD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095280 PE=4 SV=1)

HSP 1 Score: 107 bits (268), Expect = 2.58e-27
Identity = 61/110 (55.45%), Postives = 81/110 (73.64%), Query Frame = 0 

Query: 51  RYQSHFEGRSQSQSQNEV----------DTKEHEESEETLMVSFGKLLQTIQSHVEEPDF 110
           RYQSH +GR++S   N++          D K+H  S+ET++VS  KLLQTIQS VEEP+F
Sbjct: 2   RYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHV-SDETILVSLKKLLQTIQSQVEEPNF 61

Query: 111 KKLNVNDMVHLENQLEASLDKIKSQRVEAMMENSS-WIDNMDMAIAMVDS 149
           KKL++  MV LENQLE++LDKIKSQR+EAM+EN   W  +MDMA+ M++S
Sbjct: 62  KKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMINS 110

[Close]
BLAST of Csor.00g008310 vs. ExPASy TrEMBL
Match: A0A1S3CCC5 (MADS-box transcription factor 8-like OS=Cucumis melo OX=3656 GN=LOC103498847 PE=4 SV=1)

HSP 1 Score: 108 bits (270), Expect = 1.02e-26
Identity = 63/124 (50.81%), Postives = 86/124 (69.35%), Query Frame = 0 

Query: 44  NLLNIIKRYQSHFEGRSQSQSQNEV----------DTKEH-------EESEETLMVSFGK 103
           +LLNII RYQSH +GR++S   N++          D K+H       + S+ET++VS  K
Sbjct: 62  SLLNIIMRYQSHLQGRNESPIDNDLQGRSESLIDSDAKDHVSDETILDVSDETILVSLKK 121

Query: 104 LLQTIQSHVEEPDFKKLNVNDMVHLENQLEASLDKIKSQRVEAMMENSS-WIDNMDMAIA 149
            LQTIQS VEEP+FKKL++  MV LENQLE +LDKIKSQR+EAM+EN   W  +M++A+ 
Sbjct: 122 QLQTIQSQVEEPNFKKLDITQMVQLENQLEGTLDKIKSQRIEAMIENDDCWTYDMEIAMG 181

[Close]
BLAST of Csor.00g008310 vs. TAIR 10
Match: AT1G77080.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 42.4 bits (98), Expect = 3.9e-04
Identity = 19/47 (40.43%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 86  KLLQTIQSHVEEPDFKKLNVNDMVHLENQLEASLDKIKSQRVEAMME 133
           +LL+T+QS +EEP+   ++V+ ++ LE QLE +L   ++++ E MME
Sbjct: 91  ELLETVQSKLEEPNVDNVSVDSLISLEEQLETALSVSRARKAELMME 137

The following BLAST results are available for this feature:
BLAST of Csor.00g008310 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g008310 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6592962.11.10e-99100.00hypothetical protein SDJN03_12438, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023514206.13.17e-6497.25MADS-box protein 04g005320-like [Cucurbita pepo subsp. pepo][more]
XP_022959860.19.07e-6497.25truncated transcription factor CAULIFLOWER D-like [Cucurbita moschata][more]
KAG7025373.15.55e-6068.79hypothetical protein SDJN02_11868, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023004227.11.26e-5892.66MADS-box protein 04g005320-like [Cucurbita maxima][more]
BLAST of Csor.00g008310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H7I94.39e-6497.25truncated transcription factor CAULIFLOWER D-like OS=Cucurbita moschata OX=3662 ... [more]
A0A6J1KPU76.11e-5992.66MADS-box protein 04g005320-like OS=Cucurbita maxima OX=3661 GN=LOC111497621 PE=4... [more]
A0A6J1DPA04.42e-3366.33MADS-box transcription factor 8-like isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A0A0KFD82.58e-2755.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095280 PE=4 SV=1[more]
A0A1S3CCC51.02e-2650.81MADS-box transcription factor 8-like OS=Cucumis melo OX=3656 GN=LOC103498847 PE=... [more]
BLAST of Csor.00g008310 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G77080.23.9e-0440.43K-box region and MADS-box transcription factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..75

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g008310.m01Csor.00g008310.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding