Csor.00g008160 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g008160
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	60S ribosomal protein L38
Location	Csor_Chr08: 1092858 .. 1094412 (+)
RNA-Seq Expression	Csor.00g008160
Synteny	Csor.00g008160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACTGATTTCTAATTTCACTGGATTTTCTTTGTGTTTGCTCTGCTTGTAATCATTTGAACATGGTAGAGTTAAGGATTTTTCCCTATTTGTTATCATTTCAATGGTAGGTTAAGTTAAATAAATTTCAATTTACTTATCTTTGGACTGAAATTTGATGAATAACGTCGAGGAATTTTCATCAGTTGCATGCTTCTGTTTTTTTTTTTTTTTTGTTGGGTGTATCTTATTTATTCATATCGTTGTTGGAAGATTCTGTTGTTTTACCTTCGCATTCTCATAGATGAATTGTTTACTTTATAATTTTTGCAATGTTCGTTCCGATCCATTCCTTTTCGTTCTTTATTAGTTTTGTAGGTTGGATCATTTGACTTATGCAATTGAAAGAGCATCAGATCTCAAACTTACTTAACGAACTAACGAACGCAATTTCTGTTGTATGCTATATGTATATTCGTCAATTTCTTTGTGAGATTACACGTGAAGATTTCTAGTTCTTTGGAAGAATATTAATGAAACATAGATTTCTTTGTAGAGTACATGTAAAAATTTCAAGTTGTGTTCTTTGGACTGAAACTTGATAATGTGGTGAAGGAAATTGTTATTGGCTTCAAGTCTCTGCTTTAATTATTAGTCATCTGTATTTTACATTTACTTCTGTCCAGATTTGTTAAGTGATATGGTTTGGGTTTAGAGGTATAGGTGTTCTTGAAGATTTTTTGGCTAAGGTTTAGAGGTATTCAAGTAATTATTTGAGATTCTGGGACTGCTGGGTGGCCTCACTCATTTGCAAATCTTACTTTTGTGTTATGTTATGATCGATTCTTACTCTTTTTATTCCATTATTCATTGTGCAGCCGAAGCAAATTAACGAGATCAAAGATTTCCTTCTCACTGCAAGAAGGAAGGATGCTCGCTCTGTGAAAATCAAGAGAAGCAAGGATGTGGTGAAGTTCAAAGTTCGATGCTCCAAGTATCTTTATACTCTCTGTGTTTTCGACTCCGAGAAGGCAGAAAAGTTGAAGCAGTCTCTTCCACCAGGTTAACTTTTTGAACAACTATAGTTGCAATTACTTAAAACAACTTCATGCACATAATTATCAGTACTTTAGAATGGTTTAAATGCATATCATAAGGTATTTATGTCTGACCATAACTCGAAACGAGAAGGCCAAGAACATGTATAGGTGCTTCCATCATTTCCTTCTGTCGCCATTAATCTCCTAAATACATTTCTCATTTCACTTATCCTCCGCATTGTCGTTATCTCACCGATCTCTTTAAAAATTCTGTTATTGGTCTTGTATTTTCCCCTCACTTTCTCTAATCCACGTCTCTGTAAATACTTTTGTGTATTTCCTGATAACATCCTTTGATTCTGTAACGACCCTAAATTTTCTATTATAAGTTTTCAAGAAATTCATGAGTTCAATAAGTTGTCCATTGAATCTACTCATCACCAAAGCCTTTGTTTTGTGATCCTAACATGATTACTGAGACCTGACATTTATTTTACTGATTGTTCATCAGGTTTGAGTGTGCAAGATCTGTGA

mRNA sequence

ATGCCGAAGCAAATTAACGAGATCAAAGATTTCCTTCTCACTGCAAGAAGGAAGGATGCTCGCTCTGTGAAAATCAAGAGAAGCAAGGATGTGGTGAAGTTCAAAGTTCGATGCTCCAAGTATCTTTATACTCTCTGTGTTTTCGACTCCGAGAAGGCAGAAAAGTTGAAGCAGTCTCTTCCACCAGGTTTGAGTGTGCAAGATCTGTGA

Coding sequence (CDS)

ATGCCGAAGCAAATTAACGAGATCAAAGATTTCCTTCTCACTGCAAGAAGGAAGGATGCTCGCTCTGTGAAAATCAAGAGAAGCAAGGATGTGGTGAAGTTCAAAGTTCGATGCTCCAAGTATCTTTATACTCTCTGTGTTTTCGACTCCGAGAAGGCAGAAAAGTTGAAGCAGTCTCTTCCACCAGGTTTGAGTGTGCAAGATCTGTGA

Protein sequence

MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSLPPGLSVQDL

Homology

[Close]

BLAST of Csor.00g008160 vs. ExPASy Swiss-Prot
Match: O22860 (60S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 9.1e-30
Identity = 64/69 (92.75%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQI+EIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKA+KLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. ExPASy Swiss-Prot
Match: P46291 (60S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.1e-27
Identity = 61/69 (88.41%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQI+EIKDFLLTARRKDAR+VKIK++KD+VKFKVRCSKYLYTLCV D EKA+KLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARTVKIKKNKDMVKFKVRCSKYLYTLCVSDFEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. ExPASy Swiss-Prot
Match: Q95V84 (60S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-24
Identity = 55/69 (79.71%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQI+EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKA+KLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGL+V++L
Sbjct: 61 PPGLAVKEL 69

[Close]

BLAST of Csor.00g008160 vs. ExPASy Swiss-Prot
Match: Q9JJI8 (60S ribosomal protein L38 OS=Mus musculus OX=10090 GN=Rpl38 PE=1 SV=3)

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-24
Identity = 55/69 (79.71%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKAEKLKQSL
Sbjct: 1  MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGL+V+DL
Sbjct: 61 PPGLAVKDL 69

[Close]

BLAST of Csor.00g008160 vs. ExPASy Swiss-Prot
Match: Q32PB9 (60S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4)

HSP 1 Score: 110.9 bits (276), Expect = 5.7e-24
Identity = 54/69 (78.26%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MP++I EIKDFLLTARRKDA+SVKIK++KD VKFKVRCS+YLYTL + D EKAEKLKQSL
Sbjct: 1  MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGL+V++L
Sbjct: 61 PPGLAVKEL 69

[Close]

BLAST of Csor.00g008160 vs. NCBI nr
Match: XP_022959586.1 (60S ribosomal protein L38-like [Cucurbita moschata] >XP_023004175.1 60S ribosomal protein L38-like [Cucurbita maxima] >XP_023513682.1 60S ribosomal protein L38-like [Cucurbita pepo subsp. pepo] >KAG6592977.1 60S ribosomal protein L38, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134 bits (336), Expect = 2.76e-39
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL
Sbjct: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. NCBI nr
Match: KAF7113321.1 (hypothetical protein RHSIM_RhsimUnG0137800 [Rhododendron simsii] >KAF7132248.1 hypothetical protein RHSIM_Rhsim09G0021500 [Rhododendron simsii])

HSP 1 Score: 132 bits (331), Expect = 1.60e-38
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQI+EIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. NCBI nr
Match: XP_019056685.1 (PREDICTED: 60S ribosomal protein L38 [Tarenaya hassleriana])

HSP 1 Score: 131 bits (329), Expect = 3.24e-38
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKA+KLKQSL
Sbjct: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDQEKADKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. NCBI nr
Match: KAF6162255.1 (hypothetical protein GIB67_008384 [Kingdonia uniflora] >KAG8369473.1 hypothetical protein BUALT_Bualt14G0017300 [Buddleja alternifolia])

HSP 1 Score: 130 bits (328), Expect = 4.60e-38
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFD EKA+KLKQSL
Sbjct: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDPEKADKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. NCBI nr
Match: XP_018833003.1 (60S ribosomal protein L38 [Juglans regia] >KAG6645297.1 hypothetical protein CIPAW_08G112800 [Carya illinoinensis] >KAG6700446.1 hypothetical protein I3842_08G113000 [Carya illinoinensis] >KAG7967628.1 hypothetical protein I3843_08G108500 [Carya illinoinensis])

HSP 1 Score: 130 bits (328), Expect = 4.60e-38
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQI+EIKDFLLTARRKDARSVKIKRS+DVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. ExPASy TrEMBL
Match: A0A6J1KTU8 (60S ribosomal protein L38-like OS=Cucurbita maxima OX=3661 GN=LOC111497578 PE=3 SV=1)

HSP 1 Score: 134 bits (336), Expect = 1.34e-39
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL
Sbjct: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. ExPASy TrEMBL
Match: A0A6J1H598 (60S ribosomal protein L38-like OS=Cucurbita moschata OX=3662 GN=LOC111460616 PE=3 SV=1)

HSP 1 Score: 134 bits (336), Expect = 1.34e-39
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL
Sbjct: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. ExPASy TrEMBL
Match: A0A6J1I9U6 (60S ribosomal protein L38 OS=Cucurbita maxima OX=3661 GN=LOC111471374 PE=3 SV=1)

HSP 1 Score: 130 bits (328), Expect = 2.23e-38
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQI+EIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKA+KLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. ExPASy TrEMBL
Match: A0A1S3CB44 (60S ribosomal protein L38 OS=Cucumis melo OX=3656 GN=LOC103498968 PE=3 SV=1)

HSP 1 Score: 130 bits (328), Expect = 2.23e-38
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQI+EIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKA+KLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. ExPASy TrEMBL
Match: A0A5J5AU72 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_031170 PE=3 SV=1)

HSP 1 Score: 130 bits (328), Expect = 2.23e-38
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQI+EIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKA+KLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSL 60

Query: 61 PPGLSVQDL 69
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. TAIR 10
Match: AT2G43460.1 (Ribosomal L38e protein family )

HSP 1 Score: 130.2 bits (326), Expect = 6.5e-31
Identity = 64/69 (92.75%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQI+EIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKA+KLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

[Close]

BLAST of Csor.00g008160 vs. TAIR 10
Match: AT3G59540.1 (Ribosomal L38e protein family )

HSP 1 Score: 130.2 bits (326), Expect = 6.5e-31
Identity = 64/69 (92.75%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MPKQINEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKAEKLKQSL 60
          MPKQI+EIKDFLLTARRKDARSVKIKRSKD+VKFKVRCS+YLYTLCVFD EKA+KLKQSL
Sbjct: 1  MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 61 PPGLSVQDL 70
          PPGLSVQDL
Sbjct: 61 PPGLSVQDL 69

The following BLAST results are available for this feature:

BLAST of Csor.00g008160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22860	9.1e-30	92.75	60S ribosomal protein L38 OS=Arabidopsis thaliana OX=3702 GN=RPL38A PE=3 SV=1	[more]
P46291	1.1e-27	88.41	60S ribosomal protein L38 OS=Solanum lycopersicum OX=4081 GN=RPL38 PE=3 SV=1	[more]
Q95V84	1.5e-24	79.71	60S ribosomal protein L38 OS=Branchiostoma belcheri OX=7741 GN=RPL38 PE=3 SV=1	[more]
Q9JJI8	2.0e-24	79.71	60S ribosomal protein L38 OS=Mus musculus OX=10090 GN=Rpl38 PE=1 SV=3	[more]
Q32PB9	5.7e-24	78.26	60S ribosomal protein L38 OS=Bos taurus OX=9913 GN=RPL38 PE=3 SV=4	[more]

BLAST of Csor.00g008160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959586.1	2.76e-39	100.00	60S ribosomal protein L38-like [Cucurbita moschata] >XP_023004175.1 60S ribosoma...	[more]
KAF7113321.1	1.60e-38	98.55	hypothetical protein RHSIM_RhsimUnG0137800 [Rhododendron simsii] >KAF7132248.1 h...	[more]
XP_019056685.1	3.24e-38	97.10	PREDICTED: 60S ribosomal protein L38 [Tarenaya hassleriana]	[more]
KAF6162255.1	4.60e-38	97.10	hypothetical protein GIB67_008384 [Kingdonia uniflora] >KAG8369473.1 hypothetica...	[more]
XP_018833003.1	4.60e-38	97.10	60S ribosomal protein L38 [Juglans regia] >KAG6645297.1 hypothetical protein CIP...	[more]

BLAST of Csor.00g008160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KTU8	1.34e-39	100.00	60S ribosomal protein L38-like OS=Cucurbita maxima OX=3661 GN=LOC111497578 PE=3 ...	[more]
A0A6J1H598	1.34e-39	100.00	60S ribosomal protein L38-like OS=Cucurbita moschata OX=3662 GN=LOC111460616 PE=...	[more]
A0A6J1I9U6	2.23e-38	97.10	60S ribosomal protein L38 OS=Cucurbita maxima OX=3661 GN=LOC111471374 PE=3 SV=1	[more]
A0A1S3CB44	2.23e-38	97.10	60S ribosomal protein L38 OS=Cucumis melo OX=3656 GN=LOC103498968 PE=3 SV=1	[more]
A0A5J5AU72	2.23e-38	97.10	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_031170 PE=3 SV=1	[more]

BLAST of Csor.00g008160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43460.1	6.5e-31	92.75	Ribosomal L38e protein family	[more]
AT3G59540.1	6.5e-31	92.75	Ribosomal L38e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038464	Ribosomal protein L38e superfamily	GENE3D	3.30.720.90		coord: 1..69 e-value: 2.4E-36 score: 125.6
IPR002675	Ribosomal protein L38e	PFAM	PF01781	Ribosomal_L38e	coord: 2..68 e-value: 1.5E-34 score: 117.9
IPR002675	Ribosomal protein L38e	PANTHER	PTHR10965	60S RIBOSOMAL PROTEIN L38	coord: 1..69
None	No IPR available	PANTHER	PTHR10965:SF14	60S RIBOSOMAL PROTEIN L38	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g008160.m01	Csor.00g008160.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022618	ribonucleoprotein complex assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome