Csor.00g007900 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g007900
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-type domain-containing protein
Location	Csor_Chr08: 1271973 .. 1273022 (-)
RNA-Seq Expression	Csor.00g007900
Synteny	Csor.00g007900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGCGGTGGGCGACGGCAGAGAGCTCACTGGTGGTTTGACACTGAACGACGTTTTGACTGTTCATAAGAGAGCCTCGCCGAACCCCTCGCCGGAGGTGAGACTAAACGGGAGGACTTTGCTCGATATTTTAAGGGACGACGTTGGGAAGTCCCCTGCTGTTGGTAATAGAGAGAGGAAATCTTGGAAGTTTTTGAGGGATCGACTTCGTTTGAATCTAAGATCTCAAATTCCGCCGCCGAATTCGCTTCGTTTTGCGGTTTTTTCGTCGGCGGAGATGACGTCGAACGAAGAGGAATCGCCGGAATCCACTACTCCTGTCGTCGCTGCTGCTGTTCCGGTTCTCCGGCAAATTTCACGGCGGAGTTCGACGCGGTTAAGTCAGAACATTCCGACGTCTCCCGAGGCTACAAATTCCGGCGAATCACCCGAGAACAACAACTCCGACTCGACCATCGCCGACACTGGCAGTCGGAGTAGCCGGAGTCTCCTCAGGCCGCAAATGTCGCGGCGCAACTCTACGAGACGCTCGCTTGAACGGAGCGAGAGTTTCACGGACTTGACGGAGCCGGTGCATGAAGGCACGCGCCTCCTCTCGGCTGCACTGGCAATGGAGAGATCAATGTCCGCTAGAGAAACGGTGGCGACACAAGAGGCAGCCGACGCAGAAACCACCGCCGACGAAGACGATGAAGAAGCAGACTCCACGGCGGTGGAGACGGCGGCGCCGGTGAGAATGTCACTAATGGATCTCTTAGAAGAGACGGACAGGCAAATGGGATTCGAAGGGTCAAGATACAAAATAGAAGACGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAAAGGAAGAAGAAGTCGCCGTCGTGGGCGGCTGGTCGGAACGGAAGTGCTGCGTGTGCATGGTCCGTCATAAAGGGGCGGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAACTTCTGGTCAGTAGAGGCAACTGTCCACTTTGCAATGGCTTCATTTTGGAGATTCTCGACATTTTCTAA

mRNA sequence

ATGTTAGCGGTGGGCGACGGCAGAGAGCTCACTGGTGGTTTGACACTGAACGACGTTTTGACTGTTCATAAGAGAGCCTCGCCGAACCCCTCGCCGGAGGTGAGACTAAACGGGAGGACTTTGCTCGATATTTTAAGGGACGACGTTGGGAAGTCCCCTGCTGTTGGTAATAGAGAGAGGAAATCTTGGAAGTTTTTGAGGGATCGACTTCGTTTGAATCTAAGATCTCAAATTCCGCCGCCGAATTCGCTTCGTTTTGCGGTTTTTTCGTCGGCGGAGATGACGTCGAACGAAGAGGAATCGCCGGAATCCACTACTCCTGTCGTCGCTGCTGCTGTTCCGGTTCTCCGGCAAATTTCACGGCGGAGTTCGACGCGGTTAAGTCAGAACATTCCGACGTCTCCCGAGGCTACAAATTCCGGCGAATCACCCGAGAACAACAACTCCGACTCGACCATCGCCGACACTGGCAGTCGGAGTAGCCGGAGTCTCCTCAGGCCGCAAATGTCGCGGCGCAACTCTACGAGACGCTCGCTTGAACGGAGCGAGAGTTTCACGGACTTGACGGAGCCGGTGCATGAAGGCACGCGCCTCCTCTCGGCTGCACTGGCAATGGAGAGATCAATGTCCGCTAGAGAAACGGTGGCGACACAAGAGGCAGCCGACGCAGAAACCACCGCCGACGAAGACGATGAAGAAGCAGACTCCACGGCGGTGGAGACGGCGGCGCCGGTGAGAATGTCACTAATGGATCTCTTAGAAGAGACGGACAGGCAAATGGGATTCGAAGGGTCAAGATACAAAATAGAAGACGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAAAGGAAGAAGAAGTCGCCGTCGTGGGCGGCTGGTCGGAACGGAAGTGCTGCGTGTGCATGGTCCGTCATAAAGGGGCGGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAACTTCTGGTCAGTAGAGGCAACTGTCCACTTTGCAATGGCTTCATTTTGGAGATTCTCGACATTTTCTAA

Coding sequence (CDS)

ATGTTAGCGGTGGGCGACGGCAGAGAGCTCACTGGTGGTTTGACACTGAACGACGTTTTGACTGTTCATAAGAGAGCCTCGCCGAACCCCTCGCCGGAGGTGAGACTAAACGGGAGGACTTTGCTCGATATTTTAAGGGACGACGTTGGGAAGTCCCCTGCTGTTGGTAATAGAGAGAGGAAATCTTGGAAGTTTTTGAGGGATCGACTTCGTTTGAATCTAAGATCTCAAATTCCGCCGCCGAATTCGCTTCGTTTTGCGGTTTTTTCGTCGGCGGAGATGACGTCGAACGAAGAGGAATCGCCGGAATCCACTACTCCTGTCGTCGCTGCTGCTGTTCCGGTTCTCCGGCAAATTTCACGGCGGAGTTCGACGCGGTTAAGTCAGAACATTCCGACGTCTCCCGAGGCTACAAATTCCGGCGAATCACCCGAGAACAACAACTCCGACTCGACCATCGCCGACACTGGCAGTCGGAGTAGCCGGAGTCTCCTCAGGCCGCAAATGTCGCGGCGCAACTCTACGAGACGCTCGCTTGAACGGAGCGAGAGTTTCACGGACTTGACGGAGCCGGTGCATGAAGGCACGCGCCTCCTCTCGGCTGCACTGGCAATGGAGAGATCAATGTCCGCTAGAGAAACGGTGGCGACACAAGAGGCAGCCGACGCAGAAACCACCGCCGACGAAGACGATGAAGAAGCAGACTCCACGGCGGTGGAGACGGCGGCGCCGGTGAGAATGTCACTAATGGATCTCTTAGAAGAGACGGACAGGCAAATGGGATTCGAAGGGTCAAGATACAAAATAGAAGACGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAAAGGAAGAAGAAGTCGCCGTCGTGGGCGGCTGGTCGGAACGGAAGTGCTGCGTGTGCATGGTCCGTCATAAAGGGGCGGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAACTTCTGGTCAGTAGAGGCAACTGTCCACTTTGCAATGGCTTCATTTTGGAGATTCTCGACATTTTCTAA

Protein sequence

MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQISRRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLERSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF

Homology

[Close]

BLAST of Csor.00g007900 vs. NCBI nr
Match: KAG6593002.1 (hypothetical protein SDJN03_12478, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 645 bits (1665), Expect = 1.00e-232
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0


Query: 1   MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 60
           MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER
Sbjct: 1   MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 60

Query: 61  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 120
           KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS
Sbjct: 61  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 120

Query: 121 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 180
           RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE
Sbjct: 121 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 180

Query: 181 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 240
           RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE
Sbjct: 181 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 240

Query: 241 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSERK 300
           TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSERK
Sbjct: 241 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSERK 300

Query: 301 CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 349
           CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF
Sbjct: 301 CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 349

[Close]

BLAST of Csor.00g007900 vs. NCBI nr
Match: XP_022960262.1 (chromo domain-containing protein cec-1-like [Cucurbita moschata] >KAG7025412.1 hypothetical protein SDJN02_11907, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 640 bits (1652), Expect = 1.56e-230
Identity = 348/349 (99.71%), Postives = 348/349 (99.71%), Query Frame = 0


Query: 1   MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 60
           MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER
Sbjct: 14  MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 73

Query: 61  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 120
           KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS
Sbjct: 74  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 133

Query: 121 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 180
           RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE
Sbjct: 134 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 193

Query: 181 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 240
           RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE
Sbjct: 194 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 253

Query: 241 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSERK 300
           TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGG SERK
Sbjct: 254 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGGSERK 313

Query: 301 CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 349
           CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF
Sbjct: 314 CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 362

[Close]

BLAST of Csor.00g007900 vs. NCBI nr
Match: XP_023004831.1 (nucleolin-like [Cucurbita maxima])

HSP 1 Score: 625 bits (1611), Expect = 2.75e-224
Identity = 338/349 (96.85%), Postives = 345/349 (98.85%), Query Frame = 0


Query: 1   MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 60
           MLAVGDGRE+TGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPA GNRER
Sbjct: 14  MLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAAGNRER 73

Query: 61  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 120
           KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEE+SPESTTPVVAAAVPVLRQIS
Sbjct: 74  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEQSPESTTPVVAAAVPVLRQIS 133

Query: 121 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 180
           RR+STRLSQNIPTSPEATNSGESPENNNSDSTIA TGSRSSRSLLRPQMSRRNSTRRSLE
Sbjct: 134 RRNSTRLSQNIPTSPEATNSGESPENNNSDSTIAGTGSRSSRSLLRPQMSRRNSTRRSLE 193

Query: 181 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 240
           RSESFTDLTEPVHEGTR LSAALAMERSMSARETVATQEAADAETTA+EDDEEADSTAVE
Sbjct: 194 RSESFTDLTEPVHEGTRRLSAALAMERSMSARETVATQEAADAETTANEDDEEADSTAVE 253

Query: 241 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSERK 300
           TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEE+EEKE+EVAVVGG SE+K
Sbjct: 254 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEDEEKEDEVAVVGGGSEQK 313

Query: 301 CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 349
           CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF
Sbjct: 314 CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 362

[Close]

BLAST of Csor.00g007900 vs. NCBI nr
Match: XP_023522866.1 (chromo domain-containing protein cec-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 624 bits (1608), Expect = 7.60e-224
Identity = 342/349 (97.99%), Postives = 344/349 (98.57%), Query Frame = 0


Query: 1   MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 60
           MLAVG+GRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER
Sbjct: 14  MLAVGEGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 73

Query: 61  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 120
           KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS
Sbjct: 74  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 133

Query: 121 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 180
           RRSSTRLSQNIPTSPEATNSGESPENN+S STIA TGSRSSRSLLRPQMSRRNSTRRSLE
Sbjct: 134 RRSSTRLSQNIPTSPEATNSGESPENNDSASTIAGTGSRSSRSLLRPQMSRRNSTRRSLE 193

Query: 181 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 240
           RSESFTDLTEPVHEGTR LSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE
Sbjct: 194 RSESFTDLTEPVHEGTRRLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 253

Query: 241 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSERK 300
           TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEV EEEEEEEEEEEKEEEVAVVGG SERK
Sbjct: 254 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEV-EEEEEEEEEEEKEEEVAVVGGGSERK 313

Query: 301 CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 349
           CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF
Sbjct: 314 CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 361

[Close]

BLAST of Csor.00g007900 vs. NCBI nr
Match: KAA0026218.1 (nucleolin-like [Cucumis melo var. makuwa] >TYK30738.1 nucleolin-like [Cucumis melo var. makuwa])

HSP 1 Score: 458 bits (1179), Expect = 1.35e-158
Identity = 261/354 (73.73%), Postives = 285/354 (80.51%), Query Frame = 0


Query: 1   MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 60
           MLAV DGREL  G TLNDVLT+ KRASP+PSP VRL+GRTLLDI+RDDVGKSP V NRER
Sbjct: 14  MLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRDDVGKSP-VSNRER 73

Query: 61  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 120
           KSWKFLRDRLRLNLRSQIPPPNSLRF  F+SAEM  N+E+SPE TT    +A P LRQIS
Sbjct: 74  KSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSAEMMPNDEQSPEPTTTAAVSAAPSLRQIS 133

Query: 121 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 180
           RR+STR + ++P S EATNS  SP+NN++ +     G    RSLLRPQMSR NSTR S+E
Sbjct: 134 RRNSTRFNPSVPPSSEATNSDASPDNNSAAAASGGGG----RSLLRPQMSRHNSTRFSVE 193

Query: 181 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 240
           RSESFTDLTEP  EGTR LSAALA ERSMSARE VA QEAADAE  AD +++E +  A  
Sbjct: 194 RSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIADVEEQEEEQEAES 253

Query: 241 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVV-----GG 300
           T AP+RMSLMDLLEETDRQMGFEGS Y+IED    EEEEEEEEEE E EV  V     GG
Sbjct: 254 TPAPMRMSLMDLLEETDRQMGFEGSTYRIED----EEEEEEEEEEIENEVTTVCGGGGGG 313

Query: 301 WSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 349
            +ER CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFILEILDIF
Sbjct: 314 GTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 358

[Close]

BLAST of Csor.00g007900 vs. ExPASy TrEMBL
Match: A0A6J1H6Y3 (chromo domain-containing protein cec-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461059 PE=4 SV=1)

HSP 1 Score: 640 bits (1652), Expect = 7.55e-231
Identity = 348/349 (99.71%), Postives = 348/349 (99.71%), Query Frame = 0


Query: 1   MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 60
           MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER
Sbjct: 14  MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 73

Query: 61  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 120
           KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS
Sbjct: 74  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 133

Query: 121 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 180
           RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE
Sbjct: 134 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 193

Query: 181 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 240
           RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE
Sbjct: 194 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 253

Query: 241 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSERK 300
           TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGG SERK
Sbjct: 254 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGGSERK 313

Query: 301 CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 349
           CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF
Sbjct: 314 CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 362

[Close]

BLAST of Csor.00g007900 vs. ExPASy TrEMBL
Match: A0A6J1KT79 (nucleolin-like OS=Cucurbita maxima OX=3661 GN=LOC111498015 PE=4 SV=1)

HSP 1 Score: 625 bits (1611), Expect = 1.33e-224
Identity = 338/349 (96.85%), Postives = 345/349 (98.85%), Query Frame = 0


Query: 1   MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 60
           MLAVGDGRE+TGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPA GNRER
Sbjct: 14  MLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAAGNRER 73

Query: 61  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 120
           KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEE+SPESTTPVVAAAVPVLRQIS
Sbjct: 74  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEQSPESTTPVVAAAVPVLRQIS 133

Query: 121 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 180
           RR+STRLSQNIPTSPEATNSGESPENNNSDSTIA TGSRSSRSLLRPQMSRRNSTRRSLE
Sbjct: 134 RRNSTRLSQNIPTSPEATNSGESPENNNSDSTIAGTGSRSSRSLLRPQMSRRNSTRRSLE 193

Query: 181 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 240
           RSESFTDLTEPVHEGTR LSAALAMERSMSARETVATQEAADAETTA+EDDEEADSTAVE
Sbjct: 194 RSESFTDLTEPVHEGTRRLSAALAMERSMSARETVATQEAADAETTANEDDEEADSTAVE 253

Query: 241 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSERK 300
           TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEE+EEKE+EVAVVGG SE+K
Sbjct: 254 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEDEEKEDEVAVVGGGSEQK 313

Query: 301 CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 349
           CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF
Sbjct: 314 CCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 362

[Close]

BLAST of Csor.00g007900 vs. ExPASy TrEMBL
Match: A0A5D3E4J3 (Nucleolin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00730 PE=4 SV=1)

HSP 1 Score: 458 bits (1179), Expect = 6.53e-159
Identity = 261/354 (73.73%), Postives = 285/354 (80.51%), Query Frame = 0


Query: 1   MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 60
           MLAV DGREL  G TLNDVLT+ KRASP+PSP VRL+GRTLLDI+RDDVGKSP V NRER
Sbjct: 14  MLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRDDVGKSP-VSNRER 73

Query: 61  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 120
           KSWKFLRDRLRLNLRSQIPPPNSLRF  F+SAEM  N+E+SPE TT    +A P LRQIS
Sbjct: 74  KSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSAEMMPNDEQSPEPTTTAAVSAAPSLRQIS 133

Query: 121 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 180
           RR+STR + ++P S EATNS  SP+NN++ +     G    RSLLRPQMSR NSTR S+E
Sbjct: 134 RRNSTRFNPSVPPSSEATNSDASPDNNSAAAASGGGG----RSLLRPQMSRHNSTRFSVE 193

Query: 181 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 240
           RSESFTDLTEP  EGTR LSAALA ERSMSARE VA QEAADAE  AD +++E +  A  
Sbjct: 194 RSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIADVEEQEEEQEAES 253

Query: 241 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVV-----GG 300
           T AP+RMSLMDLLEETDRQMGFEGS Y+IED    EEEEEEEEEE E EV  V     GG
Sbjct: 254 TPAPMRMSLMDLLEETDRQMGFEGSTYRIED----EEEEEEEEEEIENEVTTVCGGGGGG 313

Query: 301 WSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 349
            +ER CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFILEILDIF
Sbjct: 314 GTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 358

[Close]

BLAST of Csor.00g007900 vs. ExPASy TrEMBL
Match: A0A1S3C6E1 (nucleolin-like OS=Cucumis melo OX=3656 GN=LOC103497559 PE=4 SV=1)

HSP 1 Score: 457 bits (1176), Expect = 1.87e-158
Identity = 262/354 (74.01%), Postives = 286/354 (80.79%), Query Frame = 0


Query: 1   MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 60
           MLAV DGREL  G TLNDVLT+ KRASP+PSP VRL+GRTLLDI+RDDVGKSP V NRER
Sbjct: 14  MLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRDDVGKSP-VSNRER 73

Query: 61  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 120
           KSWKFLRDRLRLNLRSQIPPPNSLRF  F+SA+M  N+E+SPE TT    +A P LRQIS
Sbjct: 74  KSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSADMMPNDEQSPEPTTTAAVSAAPSLRQIS 133

Query: 121 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 180
           RR+STR + ++P S EATNS  SP+NN   S  A +G+   RSLLRPQMSR NSTR S+E
Sbjct: 134 RRNSTRFNPSVPPSSEATNSDASPDNN---SAAAASGA-GGRSLLRPQMSRHNSTRFSVE 193

Query: 181 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 240
           RSESFTDLTEP  EGTR LSAALA ERSMSARE VA QEAADAE  AD +++E +  A  
Sbjct: 194 RSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIADVEEQEEEQEAES 253

Query: 241 TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVV-----GG 300
           T AP+RMSLMDLLEETDRQMGFEGS Y+IED    EEEEEEEEEE E EV  V     GG
Sbjct: 254 TPAPMRMSLMDLLEETDRQMGFEGSTYRIED----EEEEEEEEEEIENEVTTVCGGGGGG 313

Query: 301 WSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 349
            +ER CCVCMVRHKGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFILEILDIF
Sbjct: 314 GTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 358

[Close]

BLAST of Csor.00g007900 vs. ExPASy TrEMBL
Match: A0A6J1JVK9 (E3 ubiquitin-protein ligase RNF8-like OS=Cucurbita maxima OX=3661 GN=LOC111488241 PE=4 SV=1)

HSP 1 Score: 432 bits (1112), Expect = 1.06e-148
Identity = 260/358 (72.63%), Postives = 287/358 (80.17%), Query Frame = 0


Query: 1   MLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRDDVGKSPAVGNRER 60
           MLAVGDGRE   GLTLNDVLT+H RASP+PSP VRLNGRTLLDI+RDDVG SP VGNRER
Sbjct: 14  MLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLNGRTLLDIIRDDVGISP-VGNRER 73

Query: 61  KSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTPVVAAAVPVLRQIS 120
           KSWKFLRDRLRLNLRSQI  PNSLR   FSSAEM  +EE+S ESTT   AA  P LRQIS
Sbjct: 74  KSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPSEEQSSESTTTTGAA--PSLRQIS 133

Query: 121 RRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLE 180
           RRSS+RLS N     EA NSG+SPENNNS ST + +GSR  RSL +PQMSR +STR +LE
Sbjct: 134 RRSSSRLSLNARPKSEAANSGDSPENNNS-STASGSGSR--RSLQKPQMSRHSSTRFTLE 193

Query: 181 RSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTAVE 240
           RSESFTDL++P  +G R LSAALAMERSMSARETV  QEAADAE+TA E+++E +    E
Sbjct: 194 RSESFTDLSDPARDGARRLSAALAMERSMSARETVVAQEAADAESTAHEEEQEEEQEQPE 253

Query: 241 -----TAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGG 300
                +AAPVRMSLMDLLEETDR+MG EGSRY+I     EEEEEEEEEE   +  A  GG
Sbjct: 254 QQESSSAAPVRMSLMDLLEETDRKMGLEGSRYRI-----EEEEEEEEEEIHHKVTAKRGG 313

Query: 301 ---W-SERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 349
              W +ER+CCVCMVR+KGAAFIPCGHTFCRLCSREL VSRGNCPLCNGFILEILDIF
Sbjct: 314 EHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 360

[Close]

BLAST of Csor.00g007900 vs. TAIR 10
Match: AT3G07120.1 (RING/U-box superfamily protein )

HSP 1 Score: 154.1 bits (388), Expect = 2.1e-37
Identity = 141/379 (37.20%), Postives = 192/379 (50.66%), Query Frame = 0


Query: 13  GLTLNDVL----TVHKRASPNPSP-------EVRLNGRTLLDILRDDVGKSPAVGNRERK 72
           GL+L+ VL     +   + P+P P         R   +TL DI+R++  K    G+++R 
Sbjct: 13  GLSLDAVLGGEILIEPPSLPSPPPLPSKSLVPHRPTSQTLFDIIREEYAKE---GHKDRT 72

Query: 73  SWKFLRDRLRLNLRSQ--------------IPPPNSLRFAVFS-SAEMTSNE--EESPES 132
           +W+  R++LRL                   IP P  +  A  S SA +   +     P S
Sbjct: 73  TWQIFREKLRLKRTGSAWTSSLHIPASDILIPNPKHIGTAFRSHSAGLNIRDLVHAIPMS 132

Query: 133 TTPVVAAAVPVLRQISRRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSL 192
             P  +         +R SS R+            S ++P+++   S + D     SRS 
Sbjct: 133 DPPGSSGRA----MFTRGSSMRV-----------GSSKNPDDSPDISVLED--GPPSRS- 192

Query: 193 LRPQMSRRNSTRRSLERSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAE 252
            +PQ+SR +S R   E  E         +   R        ER MSARE VA QEAA+AE
Sbjct: 193 FKPQLSRHDSVRDHSEGEE---------NNRRRHPIVTFVEERQMSAREAVAAQEAAEAE 252

Query: 253 TTA-------DEDDEEADSTAVE-------TAAPVRMSLMDLLEETDRQMGFEGSRYKIE 312
             A       D+DDEE DS   E       +     MSLMDLLEETDRQMG  GSRY + 
Sbjct: 253 AAAAGGSEDEDDDDEEDDSGETEEMKSSSASEPKQTMSLMDLLEETDRQMGLTGSRYAM- 312

Query: 313 DEVEEEEEEEEEEEEKEEEVAVVGGWSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLV 350
           DE EE EE+EE+E  +EE  +  GG  E  CCVCMV+ KGA+F PCGHTFC+LCS+EL+ 
Sbjct: 313 DEDEEYEEDEEDENNEEEGDSHGGGEGELSCCVCMVKIKGASFTPCGHTFCKLCSKELMA 360

[Close]

BLAST of Csor.00g007900 vs. TAIR 10
Match: AT3G25030.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 6.6e-23
Identity = 110/291 (37.80%), Postives = 136/291 (46.74%), Query Frame = 0


Query: 68  DRLRLNLRSQIPPPNSLRFAV-FSSAEMTSNEEESPESTTPVVAAAVPVLRQISRRSSTR 127
           DRLR+ L  ++    S R  +   +  M      SP+  +P      P  R  S RS   
Sbjct: 8   DRLRVTLLDRMSTVESSRSCLTLEAILMADKNRTSPQILSP------PPSRSQSNRSLVE 67

Query: 128 LSQNIPTSPEATNSGESPE-----NNNSDSTIADTGSRSSRSLLRPQMSRRNSTRR---S 187
           + Q          + +S         N    I+   S S  SL  P  +R N + +    
Sbjct: 68  VMQREHRHSRDKTAWKSLREKLRLKRNGSVWIS---SNSIPSLDTPIPNRDNVSHQLGFL 127

Query: 188 LERSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTA 247
           L  S + T+    V EG   L A LA ER++SARE          ET A+ + E      
Sbjct: 128 LSNSGNVTEEASSV-EGRIRLGAVLAEERALSARE---------EETPAEREVE------ 187

Query: 248 VETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSE 307
                P RMSLM+LLEE + QM F                    + E EEEVA V   +E
Sbjct: 188 -----PARMSLMELLEENEGQMSF-----------------VSVDGEAEEEVAAVTA-AE 247

Query: 308 RKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 350
             CCVCMVR KGAAFIPCGHTFCRLCSREL V RGNCPLCN  ILE+LD+F
Sbjct: 248 ISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250

[Close]

BLAST of Csor.00g007900 vs. TAIR 10
Match: AT3G25030.2 (RING/U-box superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 6.6e-23
Identity = 110/291 (37.80%), Postives = 136/291 (46.74%), Query Frame = 0


Query: 68  DRLRLNLRSQIPPPNSLRFAV-FSSAEMTSNEEESPESTTPVVAAAVPVLRQISRRSSTR 127
           DRLR+ L  ++    S R  +   +  M      SP+  +P      P  R  S RS   
Sbjct: 8   DRLRVTLLDRMSTVESSRSCLTLEAILMADKNRTSPQILSP------PPSRSQSNRSLVE 67

Query: 128 LSQNIPTSPEATNSGESPE-----NNNSDSTIADTGSRSSRSLLRPQMSRRNSTRR---S 187
           + Q          + +S         N    I+   S S  SL  P  +R N + +    
Sbjct: 68  VMQREHRHSRDKTAWKSLREKLRLKRNGSVWIS---SNSIPSLDTPIPNRDNVSHQLGFL 127

Query: 188 LERSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTADEDDEEADSTA 247
           L  S + T+    V EG   L A LA ER++SARE          ET A+ + E      
Sbjct: 128 LSNSGNVTEEASSV-EGRIRLGAVLAEERALSARE---------EETPAEREVE------ 187

Query: 248 VETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSE 307
                P RMSLM+LLEE + QM F                    + E EEEVA V   +E
Sbjct: 188 -----PARMSLMELLEENEGQMSF-----------------VSVDGEAEEEVAAVTA-AE 247

Query: 308 RKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 350
             CCVCMVR KGAAFIPCGHTFCRLCSREL V RGNCPLCN  ILE+LD+F
Sbjct: 248 ISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250

[Close]

BLAST of Csor.00g007900 vs. TAIR 10
Match: AT4G13100.2 (RING/U-box superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 5.8e-19
Identity = 87/222 (39.19%), Postives = 113/222 (50.90%), Query Frame = 0


Query: 143 SPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLERSESFTDLTEPV---------- 202
           +P  N+S S++ D   R  R       S R+  R  L+R+ +    + P+          
Sbjct: 58  TPVRNHSSSSLLDVMRRERRRDKTAWKSLRDKLR--LKRTATGWISSNPIPTLDNHILTP 117

Query: 203 ----HEGTRLLSAALAMERSMSARE-TVATQEAADAETTADEDDEEADSTAVETAAPVRM 262
               H   RL       E + S+R+ + A +EAA+ E           +       P RM
Sbjct: 118 DNDSHRFNRLGFLLTNSETNRSSRDVSDAAEEAAEREGRL-----RLGTVLAAEREPPRM 177

Query: 263 SLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSERKCCVCMVR 322
           SLM+LLE+ D      G  Y++    E E E  +  +   E VAV G  +E  CCVCMVR
Sbjct: 178 SLMELLEDND------GHMYELSARDEVEVEGRDGCDGGGEAVAVTGA-AELGCCVCMVR 237

Query: 323 HKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 350
            KGAAFIPCGHTFCRLCSREL V RGNCPLCN  IL++LDIF
Sbjct: 238 SKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 265

[Close]

BLAST of Csor.00g007900 vs. TAIR 10
Match: AT4G13100.3 (RING/U-box superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 5.8e-19
Identity = 87/222 (39.19%), Postives = 113/222 (50.90%), Query Frame = 0


Query: 143 SPENNNSDSTIADTGSRSSRSLLRPQMSRRNSTRRSLERSESFTDLTEPV---------- 202
           +P  N+S S++ D   R  R       S R+  R  L+R+ +    + P+          
Sbjct: 49  TPVRNHSSSSLLDVMRRERRRDKTAWKSLRDKLR--LKRTATGWISSNPIPTLDNHILTP 108

Query: 203 ----HEGTRLLSAALAMERSMSARE-TVATQEAADAETTADEDDEEADSTAVETAAPVRM 262
               H   RL       E + S+R+ + A +EAA+ E           +       P RM
Sbjct: 109 DNDSHRFNRLGFLLTNSETNRSSRDVSDAAEEAAEREGRL-----RLGTVLAAEREPPRM 168

Query: 263 SLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEEEEEKEEEVAVVGGWSERKCCVCMVR 322
           SLM+LLE+ D      G  Y++    E E E  +  +   E VAV G  +E  CCVCMVR
Sbjct: 169 SLMELLEDND------GHMYELSARDEVEVEGRDGCDGGGEAVAVTGA-AELGCCVCMVR 228

Query: 323 HKGAAFIPCGHTFCRLCSRELLVSRGNCPLCNGFILEILDIF 350
            KGAAFIPCGHTFCRLCSREL V RGNCPLCN  IL++LDIF
Sbjct: 229 SKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 256

The following BLAST results are available for this feature:

BLAST of Csor.00g007900 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g007900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593002.1	1.00e-232	100.00	hypothetical protein SDJN03_12478, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960262.1	1.56e-230	99.71	chromo domain-containing protein cec-1-like [Cucurbita moschata] >KAG7025412.1 h...	[more]
XP_023004831.1	2.75e-224	96.85	nucleolin-like [Cucurbita maxima]	[more]
XP_023522866.1	7.60e-224	97.99	chromo domain-containing protein cec-1-like [Cucurbita pepo subsp. pepo]	[more]
KAA0026218.1	1.35e-158	73.73	nucleolin-like [Cucumis melo var. makuwa] >TYK30738.1 nucleolin-like [Cucumis me...	[more]

BLAST of Csor.00g007900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6Y3	7.55e-231	99.71	chromo domain-containing protein cec-1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1KT79	1.33e-224	96.85	nucleolin-like OS=Cucurbita maxima OX=3661 GN=LOC111498015 PE=4 SV=1	[more]
A0A5D3E4J3	6.53e-159	73.73	Nucleolin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00730...	[more]
A0A1S3C6E1	1.87e-158	74.01	nucleolin-like OS=Cucumis melo OX=3656 GN=LOC103497559 PE=4 SV=1	[more]
A0A6J1JVK9	1.06e-148	72.63	E3 ubiquitin-protein ligase RNF8-like OS=Cucurbita maxima OX=3661 GN=LOC11148824...	[more]

BLAST of Csor.00g007900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07120.1	2.1e-37	37.20	RING/U-box superfamily protein	[more]
AT3G25030.1	6.6e-23	37.80	RING/U-box superfamily protein	[more]
AT3G25030.2	6.6e-23	37.80	RING/U-box superfamily protein	[more]
AT4G13100.2	5.8e-19	39.19	RING/U-box superfamily protein	[more]
AT4G13100.3	5.8e-19	39.19	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 266..293
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 298..342 e-value: 2.6E-10 score: 40.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..289
None	No IPR available	PANTHER	PTHR46629	OS01G0917900 PROTEIN	coord: 7..349
None	No IPR available	PANTHER	PTHR46629:SF13	OS01G0917900 PROTEIN	coord: 7..349
None	No IPR available	CDD	cd16449	RING-HC	coord: 301..338 e-value: 8.47732E-11 score: 54.3957
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 300..345
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 301..338 e-value: 1.7E-4 score: 30.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 301..339 score: 11.102496
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 268..349 e-value: 5.0E-13 score: 50.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g007900.m01	Csor.00g007900.m01	mRNA