Csor.00g007600 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g007600
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionLipase_3 domain-containing protein
LocationCsor_Chr08: 1453429 .. 1454397 (+)
RNA-Seq ExpressionCsor.00g007600
SyntenyCsor.00g007600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTGAGAAAATATCTGCCCTTCGAGTGCGCGCGGCGGAGACGGCAACTTCATGTCCTCTGCCTTGCGCTTAAGGCCGAGTCTGATGCCGACCTGCTGGAGATTCTATGTCGCATGGATCTTTTCGAATGCGTCTACAAGGTATGTGCAATATCAAATCCTCTTGTTTGATGATTTCCATTCTCTTCCTGTCGCATGATTCCATGTCGCATGGTTCTGGTTCTGGTTCTGGTTCTGGTTCATACTGCAAATTCAAACTAATATTCTTGATTGCATTGTGCAAAAGATTCTAGCATATGATGCACGAACAATTTAAGCATCGTATATATATTTTTTTTATGGGATTGGGTATTGTTAACCCTAAGCGTCATAATGACGGCTTTTTGGCCAAATGGTTGTGGTGCATCTTCTGGAAACCTAAAGACTTTGTGAAGTAGTCATTGTGAGCAAATACGGTCCTCGCACTTTTAAGTAGGCTTATGGAATCTTCTAAAAACCCTTGGAAAGATTGTTTGGGTGCGGAGGAAACTCCCTTTAGCTCTTGCTGATATGAAGCCACTGTTTGAGGCGTCCATTTTGGTGCCTCTTAGAGGATTGTTGCGCTAAGGATTTGGATCATAGGTTTATAAGTAAGAAATACATCTCTATTGTTACGAGACCTTTTGGGGAAACTAACAACAAAGCTACCAGAGCTTATTCTGAAAATGGACAATATCATACTATTATAGGAGTCGTGGTTCTTAACACCTCTCAGATGGGCCTTCTTCCTTTATTTTGGCGTTTAGCCATCCCCTTATGGATAGGGAGACTGCCAAAGACATTGCCCTTCTTATTGGAGCCTTAGTAGTTCTCCCTTTGCAGAGGTGCGTTGGTGGACCTTGTCCATATCTTTTGGAATTGCCGGCATGGTCAATCAATTTCATTAAGTTTCTTGGAGGCTTTTGGAGTCAGTATGGCGTGGAGTAG

mRNA sequence

ATGTTTGTGAGAAAATATCTGCCCTTCGAGTGCGCGCGGCGGAGACGGCAACTTCATGTCCTCTGCCTTGCGCTTAAGGCCGAGTCTGATGCCGACCTGCTGGAGATTCTATGTCGCATGGATCTTTTCGAATGCGTCTACAAGAGGTGCGTTGGTGGACCTTGTCCATATCTTTTGGAATTGCCGGCATGGTCAATCAATTTCATTAAGTTTCTTGGAGGCTTTTGGAGTCAGTATGGCGTGGAGTAG

Coding sequence (CDS)

ATGTTTGTGAGAAAATATCTGCCCTTCGAGTGCGCGCGGCGGAGACGGCAACTTCATGTCCTCTGCCTTGCGCTTAAGGCCGAGTCTGATGCCGACCTGCTGGAGATTCTATGTCGCATGGATCTTTTCGAATGCGTCTACAAGAGGTGCGTTGGTGGACCTTGTCCATATCTTTTGGAATTGCCGGCATGGTCAATCAATTTCATTAAGTTTCTTGGAGGCTTTTGGAGTCAGTATGGCGTGGAGTAG

Protein sequence

MFVRKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKRCVGGPCPYLLELPAWSINFIKFLGGFWSQYGVE
Homology
[Close]
BLAST of Csor.00g007600 vs. NCBI nr
Match: KAG6593032.1 (hypothetical protein SDJN03_12508, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181 bits (458), Expect = 1.66e-57
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MFVRKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKRCVGGPCPYLLE 60
          MFVRKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKRCVGGPCPYLLE
Sbjct: 1  MFVRKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKRCVGGPCPYLLE 60

Query: 61 LPAWSINFIKFLGGFWSQYGVE 82
          LPAWSINFIKFLGGFWSQYGVE
Sbjct: 61 LPAWSINFIKFLGGFWSQYGVE 82

[Close]
BLAST of Csor.00g007600 vs. NCBI nr
Match: KAG6576015.1 (Protein EDS1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 60.8 bits (146), Expect = 1.86e-08
Identity = 32/46 (69.57%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 4  RKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKR 49
          RK +  +  RRR+QLH LCLALKAES ADL EILC M L ECVYKR
Sbjct: 47 RKKIQQQYERRRQQLHDLCLALKAESVADLQEILCCMVLSECVYKR 92

[Close]
BLAST of Csor.00g007600 vs. NCBI nr
Match: XP_022953623.1 (uncharacterized protein LOC111456099 isoform X2 [Cucurbita moschata])

HSP 1 Score: 60.8 bits (146), Expect = 1.86e-08
Identity = 32/46 (69.57%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 4  RKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKR 49
          RK +  +  RRR+QLH LCLALKAES ADL EILC M L ECVYKR
Sbjct: 47 RKKIQQQYERRRQQLHDLCLALKAESVADLQEILCCMVLSECVYKR 92

[Close]
BLAST of Csor.00g007600 vs. NCBI nr
Match: XP_022991976.1 (uncharacterized protein LOC111488464 [Cucurbita maxima] >XP_022991977.1 uncharacterized protein LOC111488464 [Cucurbita maxima])

HSP 1 Score: 60.8 bits (146), Expect = 1.86e-08
Identity = 32/46 (69.57%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 4  RKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKR 49
          RK +  +  RRR+QLH LCLALKAES ADL EILC M L ECVYKR
Sbjct: 47 RKKIQQQYERRRQQLHDLCLALKAESVADLQEILCCMVLSECVYKR 92

[Close]
BLAST of Csor.00g007600 vs. NCBI nr
Match: XP_023549173.1 (uncharacterized protein LOC111807608 [Cucurbita pepo subsp. pepo] >XP_023549174.1 uncharacterized protein LOC111807608 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 60.8 bits (146), Expect = 1.86e-08
Identity = 32/46 (69.57%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 4  RKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKR 49
          RK +  +  RRR+QLH LCLALKAES ADL EILC M L ECVYKR
Sbjct: 47 RKKIQQQYERRRQQLHDLCLALKAESVADLQEILCCMVLSECVYKR 92

[Close]
BLAST of Csor.00g007600 vs. ExPASy TrEMBL
Match: A0A6J1JNF1 (uncharacterized protein LOC111488464 OS=Cucurbita maxima OX=3661 GN=LOC111488464 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.99e-09
Identity = 32/46 (69.57%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 4  RKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKR 49
          RK +  +  RRR+QLH LCLALKAES ADL EILC M L ECVYKR
Sbjct: 47 RKKIQQQYERRRQQLHDLCLALKAESVADLQEILCCMVLSECVYKR 92

[Close]
BLAST of Csor.00g007600 vs. ExPASy TrEMBL
Match: A0A6J1GNT6 (uncharacterized protein LOC111456099 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456099 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.99e-09
Identity = 32/46 (69.57%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 4  RKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKR 49
          RK +  +  RRR+QLH LCLALKAES ADL EILC M L ECVYKR
Sbjct: 47 RKKIQQQYERRRQQLHDLCLALKAESVADLQEILCCMVLSECVYKR 92

[Close]
BLAST of Csor.00g007600 vs. ExPASy TrEMBL
Match: A0A6J1GNH8 (uncharacterized protein LOC111456099 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456099 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.99e-09
Identity = 32/46 (69.57%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 4  RKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKR 49
          RK +  +  RRR+QLH LCLALKAES ADL EILC M L ECVYKR
Sbjct: 47 RKKIQQQYERRRQQLHDLCLALKAESVADLQEILCCMVLSECVYKR 92

[Close]
BLAST of Csor.00g007600 vs. ExPASy TrEMBL
Match: A0A5D3BB43 (Lipase, class 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G00320 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.23e-08
Identity = 32/46 (69.57%), Postives = 34/46 (73.91%), Query Frame = 0 

Query: 4  RKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKR 49
          RK +  E  RRR+QLH LCLALKAES  DL EILC M L ECVYKR
Sbjct: 47 RKKIHQEYERRRQQLHELCLALKAESVVDLQEILCCMVLSECVYKR 92

[Close]
BLAST of Csor.00g007600 vs. ExPASy TrEMBL
Match: A0A6J1DSU3 (uncharacterized protein LOC111023604 OS=Momordica charantia OX=3673 GN=LOC111023604 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.23e-08
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 4  RKYLPFECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKR 49
          RK +  E  RRR+QLH LCLAL+A+S ADL EILC M L ECVYKR
Sbjct: 47 RKKIQREYERRRQQLHALCLALQADSVADLQEILCCMVLSECVYKR 92

[Close]
BLAST of Csor.00g007600 vs. TAIR 10
Match: AT3G07400.1 (lipase class 3 family protein )

HSP 1 Score: 49.3 bits (116), Expect = 1.7e-06
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 10 ECARRRRQLHVLCLALKAESDADLLEILCRMDLFECVYKR 50
          E  +R++Q+  LCLALK+ES  DL +ILC M L ECVYKR
Sbjct: 50 EYEKRKKQIEDLCLALKSESVEDLQDILCCMVLSECVYKR 89

The following BLAST results are available for this feature:
BLAST of Csor.00g007600 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g007600 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6593032.11.66e-57100.00hypothetical protein SDJN03_12508, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6576015.11.86e-0869.57Protein EDS1B, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022953623.11.86e-0869.57uncharacterized protein LOC111456099 isoform X2 [Cucurbita moschata][more]
XP_022991976.11.86e-0869.57uncharacterized protein LOC111488464 [Cucurbita maxima] >XP_022991977.1 uncharac... [more]
XP_023549173.11.86e-0869.57uncharacterized protein LOC111807608 [Cucurbita pepo subsp. pepo] >XP_023549174.... [more]
BLAST of Csor.00g007600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JNF18.99e-0969.57uncharacterized protein LOC111488464 OS=Cucurbita maxima OX=3661 GN=LOC111488464... [more]
A0A6J1GNT68.99e-0969.57uncharacterized protein LOC111456099 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GNH88.99e-0969.57uncharacterized protein LOC111456099 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A5D3BB431.23e-0869.57Lipase, class 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G003... [more]
A0A6J1DSU31.23e-0867.39uncharacterized protein LOC111023604 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
BLAST of Csor.00g007600 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G07400.11.7e-0660.00lipase class 3 family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g007600.m01Csor.00g007600.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane