Csor.00g007510 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g007510
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr08: 1511203 .. 1511550 (+)
RNA-Seq ExpressionCsor.00g007510
SyntenyCsor.00g007510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTATTATCATTGTACCTATATATACACCACATGAACAACATTCAAATCAGCTAGATCAAGAACTCTTTGGCTATGTTGAGGAGAGAAACCATGGCAACATCCATGTGCTCGACCTCCATTGGGATAGTCGGTTGGTGTCGCCCACGACGACGGTCACGACGACTACGGGGCAACATAATACGGCTTGGAAATCGGCGACGAGGGTTCTGTCTAGGGTCTCGAGTTGTGGTTGGGCCTTTTCGAACGCTCAAGAGGTTGATTATGGAGTTGACTCCAAACAAGAAGTTGTTAGAAGCTTATTTCTCACTTTTGCCATTGTTACGTCCAACTTTGTTCCCTCTTAG

mRNA sequence

ATGATTATTATCATTGTACCTATATATACACCACATGAACAACATTCAAATCAGCTAGATCAAGAACTCTTTGGCTATGTTGAGGAGAGAAACCATGGCAACATCCATGTGCTCGACCTCCATTGGGATAGTCGGTTGGTGTCGCCCACGACGACGGTCACGACGACTACGGGGCAACATAATACGGCTTGGAAATCGGCGACGAGGGTTCTGTCTAGGGTCTCGAGTTGTGGTTGGGCCTTTTCGAACGCTCAAGAGGTTGATTATGGAGTTGACTCCAAACAAGAAGTTGTTAGAAGCTTATTTCTCACTTTTGCCATTGTTACGTCCAACTTTGTTCCCTCTTAG

Coding sequence (CDS)

ATGATTATTATCATTGTACCTATATATACACCACATGAACAACATTCAAATCAGCTAGATCAAGAACTCTTTGGCTATGTTGAGGAGAGAAACCATGGCAACATCCATGTGCTCGACCTCCATTGGGATAGTCGGTTGGTGTCGCCCACGACGACGGTCACGACGACTACGGGGCAACATAATACGGCTTGGAAATCGGCGACGAGGGTTCTGTCTAGGGTCTCGAGTTGTGGTTGGGCCTTTTCGAACGCTCAAGAGGTTGATTATGGAGTTGACTCCAAACAAGAAGTTGTTAGAAGCTTATTTCTCACTTTTGCCATTGTTACGTCCAACTTTGTTCCCTCTTAG

Protein sequence

MIIIIVPIYTPHEQHSNQLDQELFGYVEERNHGNIHVLDLHWDSRLVSPTTTVTTTTGQHNTAWKSATRVLSRVSSCGWAFSNAQEVDYGVDSKQEVVRSLFLTFAIVTSNFVPS
Homology
[Close]
BLAST of Csor.00g007510 vs. NCBI nr
Match: KAG6593041.1 (hypothetical protein SDJN03_12517, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233 bits (593), Expect = 4.66e-77
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MIIIIVPIYTPHEQHSNQLDQELFGYVEERNHGNIHVLDLHWDSRLVSPTTTVTTTTGQH 60
           MIIIIVPIYTPHEQHSNQLDQELFGYVEERNHGNIHVLDLHWDSRLVSPTTTVTTTTGQH
Sbjct: 1   MIIIIVPIYTPHEQHSNQLDQELFGYVEERNHGNIHVLDLHWDSRLVSPTTTVTTTTGQH 60

Query: 61  NTAWKSATRVLSRVSSCGWAFSNAQEVDYGVDSKQEVVRSLFLTFAIVTSNFVPS 115
           NTAWKSATRVLSRVSSCGWAFSNAQEVDYGVDSKQEVVRSLFLTFAIVTSNFVPS
Sbjct: 61  NTAWKSATRVLSRVSSCGWAFSNAQEVDYGVDSKQEVVRSLFLTFAIVTSNFVPS 115

[Close]
BLAST of Csor.00g007510 vs. NCBI nr
Match: KAG6576025.1 (dCTP pyrophosphatase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 85.9 bits (211), Expect = 2.46e-18
Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 0 

Query: 18  QLDQELFGYVEERNHGNIHVLDLHWDSRLVSPTTTVTTTTGQHNTAWKSATRVLSRVSSC 77
           +LDQ L G V+ER+HG+ +VL+L W +R+VSPTTTV TT  Q++T W+S  RVLS V S 
Sbjct: 91  ELDQALLGNVKERSHGHTNVLELSWVNRMVSPTTTVATTKKQYDTTWESTERVLSWVKSH 150

Query: 78  GWAFSNAQEVDYGVDSK 94
           G AFS+ +EVDY  +SK
Sbjct: 151 GRAFSDVEEVDYRANSK 167

The following BLAST results are available for this feature:
BLAST of Csor.00g007510 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g007510 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6593041.14.66e-77100.00hypothetical protein SDJN03_12517, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6576025.12.46e-1857.14dCTP pyrophosphatase 1, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Csor.00g007510 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g007510 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g007510.m01Csor.00g007510.m01mRNA