Csor.00g007420 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g007420
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Atp-dependent rna helicase dbp7
Location	Csor_Chr08: 1571095 .. 1572811 (+)
RNA-Seq Expression	Csor.00g007420
Synteny	Csor.00g007420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTTGTATACTTCCCTTCGTCTTCGTGTTTGACTTTTTCTTCTTGTTTTTTTGACTCGTTACCATGGCTTTGGCTGCACAGGATTACGACTACCAGAGGAACTTCATCCCTACCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCACGCAGTGCTTCGAAGCTTCCAGAATCGCCGGATATCCCGATGTTCGCGATCTCTACGTCGCCGGCGATCTCTACCAAAACGACGTCGTTACTCCCGCTATGATCGTCGTTCCGCGCCCCAGGGTAACTTACTAACTCATTTACTATTATTTATTTATTTATTTATTATTATTATTATTATTATTATTATTTGTTGAGTGAATCATGTTTAGAGGACGCCTTTTTCCAGCCTTAAGCATGCTTTGCCTTTTTATTTTTTCACTTTCACTTATTATAAATTAAAAAGAAAAAAATAATAATAATAAAGTTAACTGCGTGATCGCCACGTGACTTTACTTGATTCCTAAAGAAAAGTTGTCCCCCTAATTATTATTATTATTATTTTTAAAAGGTTTTGTTGAGATATTCATTATTATAGTAATTTCAAAATATATATATATATATATCCAAACATTTTAAATAATATATTTTTATTCACTCAATTATTAATTTTTTTATTTATTCAAATAAAATTTTTAAGTTTTTATTTTTAAGCAAAATTTGAAAAAAAAAAAAGAGAAAAAAAAAAGTAAAGTTTTTGTTTTTTAGATTTAAAATAAAAGTTAAGCATTTTCATTTGAAAGTGAGGGAAAGTTAATGCTAAAGTGACAGGCGGGTGAGGGAAATGGGGAAAAAAAACAGTGAACATTAACGAAATTTTTAGAAAAAATGATAAAAAGTACAAAAAAAAAAAAAAAAACATTTTTGTAGAAAATTAATGGTAAAGTGACAAGCGGTGATGTAATATTATTATTTTTATTTTTATTATTTTTAATTGTGGAATTATAAAATGGTGAGTGGGGTGACGGATGAATGTGCAGAGAAAGCGTGACAGACATGGGAAGCAAGAAAAGCAGCAAAAGTGGACCGAAAGCCCTCCTCAAGTAACACTGCACCCTCCAAAGCCAATGCCCAAACCCGTCGACGAAGACTTATACAAAATCTCTCCCAATCCCTGCGCCAAGCCCAAAAAGGTCTTTTCACTTTAATGTTTTTTTTCTCTCTCGTTCCTGCACTCGTAGATATAAATAATAGACGCGTTCGTAGGTTGGGTCAGGTTAGGTTGAGACATTTTCTAAACTCAACATTATTGTTCGGGCACTCGTAGATATAAATAATAGAAGCGTTTGTGGGTTAGGTCAGGTTTGGTTGAGACATTTTCTAGACTTAACGTTATTGTTCGGGCACTCGTAGATATAAATAATAAAGGTGTTTGTGGGTTAGGTTGGGTTAGGTTGAGACATTTTTTAGATTCAACGTTATCGTTCAGACACTTGTTGATATAAATAATAAAGGTGTTTACGGGTTGGGTTAGGTCAGGTTGAGATATTTTTTAGACACAACGTTATCGGTTTGGGTTGTATTAAATAATGACCCAACCCGACGCATCCATAAGTTTTTTTTAATATTGGTTGATCGGGTTTTCTCGGAACTAGGTTATAATGTGAATTGGTTTGAAATTTTGCAGAAGAGAGGATTGAGTTACATAACGAGCTGCTTCGTGCCAACGTGTTTGATTTGA

mRNA sequence

ATGGAGGATTACGACTACCAGAGGAACTTCATCCCTACCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCACGCAGTGCTTCGAAGCTTCCAGAATCGCCGGATATCCCGATGTTCGCGATCTCTACGTCGCCGGCGATCTCTACCAAAACGACGTCGTTACTCCCGCTATGATCGTCGTTCCGCGCCCCAGGAGAAAGCGTGACAGACATGGGAAGCAAGAAAAGCAGCAAAAGTGGACCGAAAGCCCTCCTCAAGTAACACTGCACCCTCCAAAGCCAATGCCCAAACCCGTCGACGAAGACTTATACAAAATCTCTCCCAATCCCTGCGCCAAGCCCAAAAAGAAGAGAGGATTGAGTTACATAACGAGCTGCTTCGTGCCAACGTGTTTGATTTGA

Coding sequence (CDS)

ATGGAGGATTACGACTACCAGAGGAACTTCATCCCTACCTTCGGAAACTGGGAATGGAACGACCATCTCCCTTTCACGCAGTGCTTCGAAGCTTCCAGAATCGCCGGATATCCCGATGTTCGCGATCTCTACGTCGCCGGCGATCTCTACCAAAACGACGTCGTTACTCCCGCTATGATCGTCGTTCCGCGCCCCAGGAGAAAGCGTGACAGACATGGGAAGCAAGAAAAGCAGCAAAAGTGGACCGAAAGCCCTCCTCAAGTAACACTGCACCCTCCAAAGCCAATGCCCAAACCCGTCGACGAAGACTTATACAAAATCTCTCCCAATCCCTGCGCCAAGCCCAAAAAGAAGAGAGGATTGAGTTACATAACGAGCTGCTTCGTGCCAACGTGTTTGATTTGA

Protein sequence

MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMIVVPRPRRKRDRHGKQEKQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRGLSYITSCFVPTCLI

Homology

[Close]

BLAST of Csor.00g007420 vs. NCBI nr
Match: XP_022960043.1 (uncharacterized protein LOC111460910 [Cucurbita moschata] >XP_023004237.1 uncharacterized protein LOC111497631 [Cucurbita maxima] >KAG6593050.1 hypothetical protein SDJN03_12526, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025458.1 hypothetical protein SDJN02_11953 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284 bits (727), Expect = 6.94e-97
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI
Sbjct: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEKQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRG 120
           VVPRPRRKRDRHGKQEKQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRG
Sbjct: 61  VVPRPRRKRDRHGKQEKQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRG 120

Query: 121 LSYITSCFVPTCLI 134
           LSYITSCFVPTCLI
Sbjct: 121 LSYITSCFVPTCLI 134

[Close]

BLAST of Csor.00g007420 vs. NCBI nr
Match: XP_023550147.1 (uncharacterized protein LOC111808425 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278 bits (711), Expect = 1.92e-94
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI
Sbjct: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEKQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRG 120
           VVPRPRRKRDRHGKQE QQKWTESPPQVTLHPPKPMPKPVDEDLYKISPN CAKPKKKRG
Sbjct: 61  VVPRPRRKRDRHGKQEMQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNLCAKPKKKRG 120

Query: 121 LSYITSCFVPTCLI 134
           LSYITSCFVPTCLI
Sbjct: 121 LSYITSCFVPTCLI 134

[Close]

BLAST of Csor.00g007420 vs. NCBI nr
Match: XP_038899118.1 (uncharacterized protein LOC120086508 [Benincasa hispida])

HSP 1 Score: 206 bits (525), Expect = 5.37e-66
Identity = 105/140 (75.00%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDY Y+RN+IP+FGNWEWNDHLPF+ CF++SRIAGYP   DLYVAGDLYQNDVVTPAMI
Sbjct: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFDSSRIAGYPHDTDLYVAGDLYQNDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEKQQKW---TESPPQVTL--HPPKPMPKPVDEDLYKISPNP-CAK 120
           VVPRPRRKRDR GKQ +++ W   TESPP   +  +  KPMPKPVDEDLYKISP+   AK
Sbjct: 61  VVPRPRRKRDRQGKQGRKENWMKETESPPNGMMNHYNTKPMPKPVDEDLYKISPDLLAAK 120

Query: 121 PKKKRGLSYITSCFVPTCLI 134
            KKKRGLSYIT+CFVPTCLI
Sbjct: 121 TKKKRGLSYITNCFVPTCLI 140

[Close]

BLAST of Csor.00g007420 vs. NCBI nr
Match: XP_004150335.2 (uncharacterized protein LOC101219200 [Cucumis sativus] >KGN44691.1 hypothetical protein Csa_016635 [Cucumis sativus])

HSP 1 Score: 203 bits (517), Expect = 7.80e-65
Identity = 104/137 (75.91%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDY Y+RN+IP+FGNWEWNDHLPF+ CFE+SRIAG+P   DLYVAGDLY+NDVVTPAMI
Sbjct: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEKQQKWTESPPQVTLH--PPKPMPKPVDEDLYKISPNP-CAKPKK 120
           VVPRPRRKRDR GKQ K++KW  SP     H    KPMPKPVDEDLYKISP+   AK KK
Sbjct: 61  VVPRPRRKRDRQGKQSKKEKWG-SPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKK 120

Query: 121 KRGLSYITSCFVPTCLI 134
           KRGLSYIT+CFVPTCLI
Sbjct: 121 KRGLSYITNCFVPTCLI 136

[Close]

BLAST of Csor.00g007420 vs. NCBI nr
Match: XP_023548222.1 (uncharacterized protein LOC111806925 [Cucurbita pepo subsp. pepo] >XP_023548223.1 uncharacterized protein LOC111806926 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184 bits (468), Expect = 2.58e-57
Identity = 93/140 (66.43%), Postives = 106/140 (75.71%), Query Frame = 0


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDY  +RN+IP+FGNWEWNDHL F+ CFE+SRIAGYP   DLYV GDLY+NDVVTPAMI
Sbjct: 1   MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEKQQKW------TESPPQVTLHPPKPMPKPVDEDLYKISPNPCAK 120
           VVPR RRKR++ GKQ K+  W      TESPP   L  P+P PKPVDEDLYKI P   AK
Sbjct: 61  VVPRHRRKREKQGKQGKKANWMMNMKETESPPHELLQFPRPKPKPVDEDLYKIPPELLAK 120

Query: 121 PKKKRGLSYITSCFVPTCLI 134
            +KKRGLS+  + FVP CLI
Sbjct: 121 SRKKRGLSFFANWFVPNCLI 140

[Close]

BLAST of Csor.00g007420 vs. ExPASy TrEMBL
Match: A0A6J1KPV8 (uncharacterized protein LOC111497631 OS=Cucurbita maxima OX=3661 GN=LOC111497631 PE=4 SV=1)

HSP 1 Score: 284 bits (727), Expect = 3.36e-97
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI
Sbjct: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEKQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRG 120
           VVPRPRRKRDRHGKQEKQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRG
Sbjct: 61  VVPRPRRKRDRHGKQEKQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRG 120

Query: 121 LSYITSCFVPTCLI 134
           LSYITSCFVPTCLI
Sbjct: 121 LSYITSCFVPTCLI 134

[Close]

BLAST of Csor.00g007420 vs. ExPASy TrEMBL
Match: A0A6J1H7P4 (uncharacterized protein LOC111460910 OS=Cucurbita moschata OX=3662 GN=LOC111460910 PE=4 SV=1)

HSP 1 Score: 284 bits (727), Expect = 3.36e-97
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI
Sbjct: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEKQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRG 120
           VVPRPRRKRDRHGKQEKQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRG
Sbjct: 61  VVPRPRRKRDRHGKQEKQQKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRG 120

Query: 121 LSYITSCFVPTCLI 134
           LSYITSCFVPTCLI
Sbjct: 121 LSYITSCFVPTCLI 134

[Close]

BLAST of Csor.00g007420 vs. ExPASy TrEMBL
Match: A0A0A0KA54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372860 PE=4 SV=1)

HSP 1 Score: 203 bits (517), Expect = 3.78e-65
Identity = 104/137 (75.91%), Postives = 115/137 (83.94%), Query Frame = 0


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDY Y+RN+IP+FGNWEWNDHLPF+ CFE+SRIAG+P   DLYVAGDLY+NDVVTPAMI
Sbjct: 1   MEDYYYRRNYIPSFGNWEWNDHLPFSHCFESSRIAGFPHDTDLYVAGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEKQQKWTESPPQVTLH--PPKPMPKPVDEDLYKISPNP-CAKPKK 120
           VVPRPRRKRDR GKQ K++KW  SP     H    KPMPKPVDEDLYKISP+   AK KK
Sbjct: 61  VVPRPRRKRDRQGKQSKKEKWG-SPSNGMSHNYSTKPMPKPVDEDLYKISPDLLAAKSKK 120

Query: 121 KRGLSYITSCFVPTCLI 134
           KRGLSYIT+CFVPTCLI
Sbjct: 121 KRGLSYITNCFVPTCLI 136

[Close]

BLAST of Csor.00g007420 vs. ExPASy TrEMBL
Match: A0A6J1JQ37 (uncharacterized protein LOC111487931 OS=Cucurbita maxima OX=3661 GN=LOC111487931 PE=4 SV=1)

HSP 1 Score: 182 bits (462), Expect = 1.03e-56
Identity = 90/140 (64.29%), Postives = 106/140 (75.71%), Query Frame = 0


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDY  +RN+IP+FGNWEWNDHL F+ CFE+SRIAGYP   DLYV GDLY+ND++TPAMI
Sbjct: 1   MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDIITPAMI 60

Query: 61  VVPRPRRKRDRHGKQEKQQKW------TESPPQVTLHPPKPMPKPVDEDLYKISPNPCAK 120
           VVPR RRKR++ GK+ K+  W      TESPP   L  P+P PKPVDEDLYKI P   AK
Sbjct: 61  VVPRHRRKREKQGKKGKKANWMMNMKETESPPHELLQFPRPKPKPVDEDLYKIPPELLAK 120

Query: 121 PKKKRGLSYITSCFVPTCLI 134
            +KKRGLS+  + FVP CLI
Sbjct: 121 SRKKRGLSFFANWFVPNCLI 140

[Close]

BLAST of Csor.00g007420 vs. ExPASy TrEMBL
Match: A0A6J1GPL2 (uncharacterized protein LOC111455979 OS=Cucurbita moschata OX=3662 GN=LOC111455979 PE=4 SV=1)

HSP 1 Score: 182 bits (461), Expect = 1.41e-56
Identity = 93/139 (66.91%), Postives = 106/139 (76.26%), Query Frame = 0


Query: 1   MEDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMI 60
           MEDY  +RN+IP+FGNWEWNDHL F+ CFE+SRIAGYP   DLYV GDLY+NDVVTPAMI
Sbjct: 1   MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMI 60

Query: 61  VVPRPRRKRDRHGKQEKQ-----QKWTESPPQVTLHPPKPMPKPVDEDLYKISPNPCAKP 120
           VVPR RRKR++ GKQ K+      K TESPP   L  P+P PKPVDEDLYKI P   AK 
Sbjct: 61  VVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRPKPKPVDEDLYKIPPELLAKS 120

Query: 121 KKKRGLSYITSCFVPTCLI 134
           +KKRGLS+  + FVP CLI
Sbjct: 121 RKKRGLSFFANWFVPNCLI 139

[Close]

BLAST of Csor.00g007420 vs. TAIR 10
Match: AT5G48500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-23
Identity = 67/163 (41.10%), Postives = 87/163 (53.37%), Query Frame = 0


Query: 3   DYDY------QRNFIPTFGNWEWNDHLPFTQCFEAS--------RIAGYPDVRDLYVAGD 62
           DY+Y      +R  +P FG+W+WND +PFTQCFE +          A YP  RDLY+AGD
Sbjct: 2   DYEYGGGEYCRRGHVPAFGSWDWNDAVPFTQCFETATTQQPAFLHYASYPQDRDLYLAGD 61

Query: 63  LYQN-DVVTPAMIVVPR--------PRRKRDRHGKQEKQQKWTESPPQVTLHPPKPM--- 122
           LY N  +V PA+I+VPR        P  K+    KQ+   K         +  P P+   
Sbjct: 62  LYDNHHLVAPAVIIVPRRRAKVGQEPAEKKRNVSKQQHNYKTEAREFNAPVSCPTPVVKR 121

Query: 123 ----PKPVDEDLYKISPNPCA-KPKKKR---GLSYITSCFVPT 132
               PKPVDEDLYK+SP   + K K+KR   G   I+ CF+PT
Sbjct: 122 RMKAPKPVDEDLYKVSPQLLSVKSKRKRGGGGFGCISRCFLPT 164

[Close]

BLAST of Csor.00g007420 vs. TAIR 10
Match: AT5G18310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 5.3e-05
Identity = 45/142 (31.69%), Postives = 61/142 (42.96%), Query Frame = 0


Query: 2   EDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIA-------GYPDVRDLYVAGDLYQNDV 61
           + Y  +   IP FG WE  + +P TQ FE  R A        +P  R L+      Q   
Sbjct: 7   DTYKKKSGQIPRFGEWEEANEMPITQYFENPRQAEALKLASHHPRPRHLHA-----QRQT 66

Query: 62  VTPAMIVVPRPRRKRDRHGKQEKQQ------KWTESPPQVTLHPPKPMPKPVDEDLYKIS 121
                   P+ RR RD   + +K        K  ++   +T  P    PKPVDEDLYKI 
Sbjct: 67  AGTKEKRGPQ-RRVRDVSAQSDKYYIDVNGVKQFKNDVALTCKP----PKPVDEDLYKIP 126

Query: 122 PNPCAKPKKKRGLSYITSCFVP 131
           P       +KR  S++ +C VP
Sbjct: 127 PEFIHSSTRKRRPSFL-ACLVP 137

[Close]

BLAST of Csor.00g007420 vs. TAIR 10
Match: AT5G18310.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.0e-04
Identity = 46/166 (27.71%), Postives = 64/166 (38.55%), Query Frame = 0


Query: 2   EDYDYQRNFIPTFGNWEWNDHLPFTQCFEASRIAGYPDVRDLYVAGDLYQNDVVTPAMIV 61
           + Y  +   IP FG WE  + +P TQ FE  R AG   +R  Y       +   + +   
Sbjct: 7   DTYKKKSGQIPRFGEWEEANEMPITQYFENPRQAGL--IRHQYTTTSSASSTTTSSSSSS 66

Query: 62  V------------PRPRR---KRDRHGKQEKQ----------------------QKWTES 121
                        PRPR    +R   G +EK+                       K  ++
Sbjct: 67  SSSAEALKLASHHPRPRHLHAQRQTAGTKEKRGPQRRVRDVSAQSDKYYIDVNGVKQFKN 126

Query: 122 PPQVTLHPPKPMPKPVDEDLYKISPNPCAKPKKKRGLSYITSCFVP 131
              +T  P    PKPVDEDLYKI P       +KR  S++ +C VP
Sbjct: 127 DVALTCKP----PKPVDEDLYKIPPEFIHSSTRKRRPSFL-ACLVP 165

The following BLAST results are available for this feature:

BLAST of Csor.00g007420 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g007420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960043.1	6.94e-97	100.00	uncharacterized protein LOC111460910 [Cucurbita moschata] >XP_023004237.1 unchar...	[more]
XP_023550147.1	1.92e-94	98.51	uncharacterized protein LOC111808425 [Cucurbita pepo subsp. pepo]	[more]
XP_038899118.1	5.37e-66	75.00	uncharacterized protein LOC120086508 [Benincasa hispida]	[more]
XP_004150335.2	7.80e-65	75.91	uncharacterized protein LOC101219200 [Cucumis sativus] >KGN44691.1 hypothetical ...	[more]
XP_023548222.1	2.58e-57	66.43	uncharacterized protein LOC111806925 [Cucurbita pepo subsp. pepo] >XP_023548223....	[more]

BLAST of Csor.00g007420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPV8	3.36e-97	100.00	uncharacterized protein LOC111497631 OS=Cucurbita maxima OX=3661 GN=LOC111497631...	[more]
A0A6J1H7P4	3.36e-97	100.00	uncharacterized protein LOC111460910 OS=Cucurbita moschata OX=3662 GN=LOC1114609...	[more]
A0A0A0KA54	3.78e-65	75.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372860 PE=4 SV=1	[more]
A0A6J1JQ37	1.03e-56	64.29	uncharacterized protein LOC111487931 OS=Cucurbita maxima OX=3661 GN=LOC111487931...	[more]
A0A6J1GPL2	1.41e-56	66.91	uncharacterized protein LOC111455979 OS=Cucurbita moschata OX=3662 GN=LOC1114559...	[more]

BLAST of Csor.00g007420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48500.1	2.5e-23	41.10	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G18310.1	5.3e-05	31.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G18310.2	2.0e-04	27.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..103
None	No IPR available	PANTHER	PTHR33699	EXPRESSED PROTEIN	coord: 1..133
None	No IPR available	PANTHER	PTHR33699:SF2	PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN-RELATED	coord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g007420.m01	Csor.00g007420.m01	mRNA