Csor.00g007340 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCGCTTTCAACTTGGTTCCGGTACATAGCTCACAAGCTCGAGTACTCCGTTTCTCTCAGTTGGAAGGTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTCCTATTCTTCAATTTTTCACATGGGTTTTCTTGAATCACTGCTTATTTTCTTTATAATTTGTGTTGGGTGTTCTGATTGTTCATGCTGGTAACATTACTCGAAATTCATTAGAAAATAATATCATATCTTGCCCTGTTGTTTGTCATCAGGCTTCGGATTTATTGTTTTTGAAGTATTCTTGGATATCTAATTCGGCAAGTTGTGAGCTAAATTGCATTTCTTGGTTTTTATTGCTTTGGTTTTCGATCACCGATTAGTCCTCTGAGTTTGTTTCGTTGTTTATAAGTTCCTGACAATTGATTTTCAGTTACAAATTGATGCATATCTTTACCAATATTTAAAAAAAAAAAAAATTGATTGTATGAATGGCTACTTTTTAAATTTTGATTATTACCAGATCATTCCTTTATTGCTGCTATTCCCCTCTTTCAAAAAAAGCAGGGTTTGTCTATTTCTTTTAATAAAATTATAGACCGAGAAAATAGACGAGTCTTTCAAATGGGAAAAATAATAATTTGGGTTCCAGTGTATAATTGGTTTCTTGGCATTTTGTTGTAGTCCTCTATACTTCTTCTTTTAAAAAAATTACATAAAGTTACTCCCCTTTTTTCTACTGATCAGACCTTTTAAGATCTGTTCTAGCACTCTATGCTGAGAATCATCTGTTTTTCTCCCATTTCGATTGACCTTGTCCGGACAATGCGTGTTGAAGATAGTAAATTTTTTTGTTCTCTCTTTTGGTCGGACTGTGAGAGGAAGTATATCACCTGTTTTCCTTTTTCTGAATGAGTGTTCCTTTTAGTTTCTTATAGAATCATATTTCCAATGTTTGAGAAGTTGAAGCCAACCATGACTTTTTCTGTTGAATGAGTGTGAGCTGCTGGGAGTCTGGGACTCTATAGTTAAACTATGTGCTAGAAAAAGCAAATGGTTTATAGCCAATGCCAGTTCTTGAATATTCTACCTTCCTCGCCGGATTGTCTTAGATCTTCTGATTCCTCTATTCTATTAGCCAATCTTTACATGGTTTTATCTCTTTGTGCATATTCTTTCGTTTCTGGGTTAGCTTGTAATTCTTTCTTGGTTAGCTTCTTGGTTCTCAGCTAGGAAATTTTTCAACTCTAAGAAGTGTTTGATTGAGGAAAAAGTAGAGCGGTCTTAACCATTCAAACCTTTCAACTATTTTATATAAGCAATTAAAAGAAGAATCTTTACTCTGTTGCAGAACTATAAGGGAGGTCAAATTACCGACAAAGAAGTAGGTGATGCTGTCTGGAAGAATTTACTTCAGGGAAAGCTCACATACCTACACTTGTTTAAAGGAGTGGAGATGGCCCCAACTGTAGGTGAGACAGGAGGAACACTTCTCGTACGCAAATTACCTGTGGCAAACCCAACGTAATCTTTGTCTTCCTCTTAGTACAAAGTAGTATATTCTCTTTTTCTGCAACAAAGTTTCCTATTTTTGTCATAGATTTAAAATGCTTACTAATCTGGTCCTTTTGATTTGGTTCTAATTTATTTCCTCAATTTAAGTTGATCATCTGAATAAAGAGAAGTCAGTCCTCTGCTCCGTTCTTTTATACTTCAGCGGCTATTGTTATTAATTGGCGAGAAACATGCTTCATTAAGAAAGGAGAATATAATTCATTGACCAATGAGTTTTTGAAGGGGGGTTGATTGTTCTACAAAAGAAAAGAGAATGATTACAAACGTAGTGATTTCTATAAATATGGATGTGGAGAGAAATAAAGTAAACTAATTTCCATGTTTGGTCGATCGTCTTTTCTTCTTGAAGATCATTTATTTAGTGTGACTACCACCTTAATAAGTTGTCCCGGAATAGTTTTTAGTTTATTCTTTATACATCAGATGGTGTAGAAGTAGCAGTTATGTATTGGATATATTCTTTCTCTTAAAAAATCCTACCTCTGCAGTCCGACCAAATATTTCGAAGCTCAACATATAAAGTATTTGGCGATCAACTCTCGAGTGTATCTAAGGAAGAGCCTTTATTAGTAAAAAGATTCAATAAGTTTGACCAAAAGGACAAAACATAAGGAGGTTGTTTGAGTTTTCTAGACTACTTTTGTGAAGGAAGCACCACTTTTAGTCATGGTAGCTGAGGAGATGTCTTTGCTGTATTTTTCGTTTGTGTCTAAGCCACTGAGATCTAGGGAGGTCTCAGAATGAATGTACGCTTCTTTGGAGCCTTCCACATTCAAAGATATTTTCAAAATAAGATCGTGATAGGATGATGGTAGGAATATTACCGGGGTAGCTAGAAATATTATCAGAGTATTAAGGGAATATTGGTCACTAGTCAAAGAATTGGTTAGAGAGAGTGGAAGGAGATGCAGGCAGGCATTGGTTTAGTTGGTTTTGGCCTTGAGAATACTTGAGATATGGTTCCAAATACCTTGAATACTTGGGGATTATTGAATTTATTCTCCGAGTACCTCGAATGCTTTGATCTTTCCTTGGAGTTTTTCAATGCTTTATTTATGTTTTGCCTCATATCATACTTTATAAACCATTCTATGTTTGTTTGTTTTCTATATTTTTATCGATCAGTGTAAAGTTCGTTTCTGGTTAAAAAAGAATATTGTATTCAGAACTGTTTGAGTCAACTGGTGCCTTCTTGTTCCAAAACTCCCACTCCCTGAACATAGAGTTCTGCTATGAAGAAGATTATCACCAGGGTTGCCCACCTTCCATCTCCCAATTTAAAAAGGCCTTTTGAAAACTTAGCTCCAGCTACTGTTCTGTTCATCCTAAACTTCTCCCTTAGATTCTAACTTGAATCCTCTTCTGTTTGCAAATATAGTCTCACACTCTTACATCCAATTGGAGAACCCTTTTGTAACTTTGTTGGATGCTCTTACTAGATTAGGAAGATTGTTAACTATCTTTTTCTTTTCCACCACCAAGCAGAAGAGGATGTCACTTTTCTTTGGTAGATTAGCAATATGACTTCCTCATTTACCGATTGAGAAGCCTCGATGTGGTTCTCCCTTATTCGTTTTTGGACAATCAATTAACCACCAAGAGAAAACAAAAGGGACGATCCAGCTCTTTAGTCGCTTGATTCTCTCGGTTTTTCACCAACAGGCACATAATAGGTGATGTTGGAATTGCAGCCTTGAATCTAACCTCCTCGTTTATAGTGATAGCCTCAACGAAATCTCGATCTACCTTACCATAGGCATTTTAAATATTGAGCTCAAATACCATCTCCTCCGTCCTCTTACATCCCACTCATCAGTAACGTCATTCACAATTAAAATTGGATAAGCTATTTATCTTCCCAAAATGAAAGTGGTTTGGTTGGGAAACAAAGTTTTTTGCCTAGGATTTGATGTATCATAATAGGTGTTAACAAATACTCTTCTCCTGATAACCGAATCCAAGGTTTGAAGATCGGGCGTAGAACTATCGGCAATGAGCACCCCCATTACAAGTTATCCTTTTTTGGAGGATAGAGCATAGAACTCAGAAAGAGGGAAGAAAAAGGTATTTCCTATTGGTACAAGTACATGTTATGAATGAGAATTGTTTATGGTTCATGGAGTAGAAATTAGAATTGAGTCATTGTATGATGTTGTATATGCTCCTATAACATACAAATTAGGACCCTACTTCAATGCTATATTTTTTAGCCTATACTCACCATTCCCCTTTGTTTAACAGCAGAGATACTTGTTTGTTGACACAGGAGTGTTTTTGTTGGAGACGTCGTGGTCGTAAAGGAGCCAGAGAAACCAGAGAACTATCTTGTCAGAAGATTGGCTGCAGTTGAAGGGTATGAAATGTTGTCTACTGATGAGAAGGATGAACCTTTCATCCTTGAGAAGGATGAGTGCTGGTTGTTGGCCGAAAATGAGAAGTTGAAGCCCAAGGTACAATCCAGTGACATTACCATAATTCTGCTGTAGTTGAAGCCATCCTGTTCTACTGTGGTGCAGTTTGAGTTTCTTTTTACTTACCCTTTCCCTCTCATACATCAAATGGCAGGAAGCATACGACAGCCGAACATTTGGTCCGGTACCAATGTCGGACATTGTAGGCAGAGCCATATATTGCCTACGAACAGCGGTCGATCATGGCCCGGTGCAGAATAGGTTAGCCACACCATTCTCTCTATAAAAAAAAGTGCAGAATTGTTGTTGTTGGGACTGACTGAGTTGTGTTTGTTTTCACCAGTTATTATAGCATGAAAAGGGATTCACCTATATTGGAAATTGAACTGGACGTTGACGAGATGGCTAAAAATCACAAGGCCTGA ATGGCTTCGCTTTCAACTTGGTTCCGGTACATAGCTCACAAGCTCGAGTACTCCGTTTCTCTCAGTTGGAAGAACTATAAGGGAGGTCAAATTACCGACAAAGAAGTAGGTGATGCTGTCTGGAAGAATTTACTTCAGGGAAAGCTCACATACCTACACTTGTTTAAAGGAGTGGAGATGGCCCCAACTGTAGGTGAGACAGGAGGAACACTTCTCGTACGCAAATTACCTGTGGCAAACCCAACGAGTGTTTTTGTTGGAGACGTCGTGGTCGTAAAGGAGCCAGAGAAACCAGAGAACTATCTTGTCAGAAGATTGGCTGCAGTTGAAGGGTATGAAATGTTGTCTACTGATGAGAAGGATGAACCTTTCATCCTTGAGAAGGATGAGTGCTGGTTGTTGGCCGAAAATGAGAAGTTGAAGCCCAAGGAAGCATACGACAGCCGAACATTTGGTCCGGTACCAATGTCGGACATTGTAGGCAGAGCCATATATTGCCTACGAACAGCGGTCGATCATGGCCCGGTGCAGAATAGTTATTATAGCATGAAAAGGGATTCACCTATATTGGAAATTGAACTGGACGTTGACGAGATGGCTAAAAATCACAAGGCCTGA ATGGCTTCGCTTTCAACTTGGTTCCGGTACATAGCTCACAAGCTCGAGTACTCCGTTTCTCTCAGTTGGAAGAACTATAAGGGAGGTCAAATTACCGACAAAGAAGTAGGTGATGCTGTCTGGAAGAATTTACTTCAGGGAAAGCTCACATACCTACACTTGTTTAAAGGAGTGGAGATGGCCCCAACTGTAGGTGAGACAGGAGGAACACTTCTCGTACGCAAATTACCTGTGGCAAACCCAACGAGTGTTTTTGTTGGAGACGTCGTGGTCGTAAAGGAGCCAGAGAAACCAGAGAACTATCTTGTCAGAAGATTGGCTGCAGTTGAAGGGTATGAAATGTTGTCTACTGATGAGAAGGATGAACCTTTCATCCTTGAGAAGGATGAGTGCTGGTTGTTGGCCGAAAATGAGAAGTTGAAGCCCAAGGAAGCATACGACAGCCGAACATTTGGTCCGGTACCAATGTCGGACATTGTAGGCAGAGCCATATATTGCCTACGAACAGCGGTCGATCATGGCCCGGTGCAGAATAGTTATTATAGCATGAAAAGGGATTCACCTATATTGGAAATTGAACTGGACGTTGACGAGATGGCTAAAAATCACAAGGCCTGA MASLSTWFRYIAHKLEYSVSLSWKNYKGGQITDKEVGDAVWKNLLQGKLTYLHLFKGVEMAPTVGETGGTLLVRKLPVANPTSVFVGDVVVVKEPEKPENYLVRRLAAVEGYEMLSTDEKDEPFILEKDECWLLAENEKLKPKEAYDSRTFGPVPMSDIVGRAIYCLRTAVDHGPVQNSYYSMKRDSPILEIELDVDEMAKNHKA Homology
BLAST of Csor.00g007340 vs. ExPASy Swiss-Prot
Match: Q28I39 (Mitochondrial inner membrane protease subunit 1 OS=Xenopus tropicalis OX=8364 GN=immp1l PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 6.7e-04 Identity = 28/100 (28.00%), Postives = 48/100 (48.00%), Query Frame = 0
BLAST of Csor.00g007340 vs. NCBI nr
Match: KAG6593058.1 (hypothetical protein SDJN03_12534, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025468.1 hypothetical protein SDJN02_11963 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 414 bits (1063), Expect = 8.73e-146 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Csor.00g007340 vs. NCBI nr
Match: XP_022960532.1 (uncharacterized protein LOC111461243 [Cucurbita moschata] >XP_023513513.1 uncharacterized protein LOC111778098 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 411 bits (1057), Expect = 7.17e-145 Identity = 204/205 (99.51%), Postives = 204/205 (99.51%), Query Frame = 0
BLAST of Csor.00g007340 vs. NCBI nr
Match: XP_023004821.1 (uncharacterized protein LOC111498007 [Cucurbita maxima]) HSP 1 Score: 407 bits (1047), Expect = 2.40e-143 Identity = 203/205 (99.02%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Csor.00g007340 vs. NCBI nr
Match: XP_038897309.1 (mitochondrial inner membrane protease subunit 2-like [Benincasa hispida]) HSP 1 Score: 387 bits (994), Expect = 2.90e-135 Identity = 191/205 (93.17%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of Csor.00g007340 vs. NCBI nr
Match: XP_023547664.1 (mitochondrial inner membrane protease subunit 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 384 bits (987), Expect = 3.38e-134 Identity = 188/205 (91.71%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of Csor.00g007340 vs. ExPASy TrEMBL
Match: A0A6J1H7P2 (uncharacterized protein LOC111461243 OS=Cucurbita moschata OX=3662 GN=LOC111461243 PE=4 SV=1) HSP 1 Score: 411 bits (1057), Expect = 3.47e-145 Identity = 204/205 (99.51%), Postives = 204/205 (99.51%), Query Frame = 0
BLAST of Csor.00g007340 vs. ExPASy TrEMBL
Match: A0A6J1KT69 (uncharacterized protein LOC111498007 OS=Cucurbita maxima OX=3661 GN=LOC111498007 PE=4 SV=1) HSP 1 Score: 407 bits (1047), Expect = 1.16e-143 Identity = 203/205 (99.02%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Csor.00g007340 vs. ExPASy TrEMBL
Match: A0A6J1GQA3 (mitochondrial inner membrane protease subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111456518 PE=4 SV=1) HSP 1 Score: 383 bits (984), Expect = 4.69e-134 Identity = 188/205 (91.71%), Postives = 197/205 (96.10%), Query Frame = 0
BLAST of Csor.00g007340 vs. ExPASy TrEMBL
Match: A0A6J1JS86 (mitochondrial inner membrane protease subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111487930 PE=4 SV=1) HSP 1 Score: 381 bits (978), Expect = 3.85e-133 Identity = 187/205 (91.22%), Postives = 197/205 (96.10%), Query Frame = 0
BLAST of Csor.00g007340 vs. ExPASy TrEMBL
Match: A0A1S3BH09 (uncharacterized protein LOC103489739 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489739 PE=4 SV=1) HSP 1 Score: 373 bits (958), Expect = 1.91e-129 Identity = 184/205 (89.76%), Postives = 195/205 (95.12%), Query Frame = 0
BLAST of Csor.00g007340 vs. TAIR 10
Match: AT2G31140.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 287.3 bits (734), Expect = 9.4e-78 Identity = 134/205 (65.37%), Postives = 171/205 (83.41%), Query Frame = 0
BLAST of Csor.00g007340 vs. TAIR 10
Match: AT1G06200.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 276.2 bits (705), Expect = 2.2e-74 Identity = 129/205 (62.93%), Postives = 167/205 (81.46%), Query Frame = 0
BLAST of Csor.00g007340 vs. TAIR 10
Match: AT1G53530.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06 Identity = 37/120 (30.83%), Postives = 59/120 (49.17%), Query Frame = 0
BLAST of Csor.00g007340 vs. TAIR 10
Match: AT1G53530.2 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 48.1 bits (113), Expect = 9.6e-06 Identity = 34/110 (30.91%), Postives = 54/110 (49.09%), Query Frame = 0
BLAST of Csor.00g007340 vs. TAIR 10
Match: AT1G29960.1 (Peptidase S24/S26A/S26B/S26C family protein ) HSP 1 Score: 47.0 bits (110), Expect = 2.1e-05 Identity = 33/125 (26.40%), Postives = 59/125 (47.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|