Csor.00g005090 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g005090
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ribosomal protein
Location	Csor_Chr08: 3005205 .. 3009909 (+)
RNA-Seq Expression	Csor.00g005090
Synteny	Csor.00g005090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGGCCACTTGTTGTCCCACTGTGCACTCTTCCCTTATGATGGCCCACACTTGTTCTGTTCACCCTCAAGACCTTCCTTCCCTTCTCTCCTTCCGACCCATTGCCGCCCCTTCCACCGCCAAGATTTTCCACCCCTTAATTGTCCGTAGCAGGGGAAGGAAGCCAATCAATTGGGTTGACTTTAATTTTAGGAGAGAATCTAGGGATCATTTGGTTGTGGCTGCTTTGGCTGCGGAAATTGAGGTGCCTGAGGCTGTGGAAGAGAATGGAGAAGAGGGTAATACAGCTACTTTAATTGTGCCCAAGATTAAGAAGGGCAAGGCTGCATTGCCTCTTAAAAGGGACAGGGTAAGCTTGAGTTTAATCTCTCTTTTATTTGCCTGTTTTCAATCTTGTTGAATGACTTTTTGGATGTTGTTTTAGTGTTTGATTAGTGGGTTTTGCTTCATTTTAGGTTTCTTTTTTCTTTGTTCTCCTTCTGGTTTCATTATCCTCTGAGAGTACTAGTTCTCTAATACCCACTTCGGTTGGAGAGGAAACGAGGAAACGAAACATTTCTTATAAGGGTGTGGAAACTTTTCTTTTTAGGTACATTTTAAAACTGTGAAACTGATGGTGATACGTAGCAGGCCAAAGCGGCCAATATCTACTAATGGTGAGCTTGGACTGATTACAAATGGTATCAGAGCCAAACATTGGGGGTGTACCAGTGAGGAACTGGGCCCCTAAGGGAGGTGGACTATGAGAACCCATGTTAGTTGGAGAGGGGAACAAAACATTCCTTATAAGGGTGTGAAATCCTTCCCTAGTAGATGCGTTTTAAAATCATGAGGCTGACGGTGATATGTAATGGGCAAAAGCGGCTAATATCTACTAGCAGTGGACTTAGGCTATTATAAATGGTATCAGAGCCAAACACCGGGCAATGTGCCAGCGAGGACACTGGGCCCCCAAGGGAGTGGATTGTGAGATCCCACGTTGGTTGGAGATGGAGGAAATGAAATGTAATGGAGCTGTTACAAATGGTATCATAGCCAAACACCAGGCGGTGTGCGAGCGAGGACGCTGACCCCCAAGGGGAGTGGATTGTGAGATCACACATCGGTTGGAGAAGTGAACGAAACATTCCTTATAAGGATGTGGAAACCTCTCCCTAATAGACGTGTTTTAAAATCGTGAGGCTAACGATGATATGTAACGGACCAAGGCGTACAATATCTACTAGCAGTGAGCTTGGACTGTTACAAACAGTATCAGAGCCAAACACCGGACAGTGTACCAGCAAGGATGCTAGCCTCCAAGGGGGTGGATTGTGAGATCCCACATTAGTTGGAGAAGGGAACAAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCGTGAGGTGGACGACAATACGTAACGGGCCAAAACGGACAATATCTACTAGCGGTAGGCTTTGACTATTACAAGTTCGTATCATATCTATTTCCGAGTATGCCTTCGTTAGTTGATCGAGAACCATTTGAGGTTGAAAGAAAACGCTAGCAATAGGGCGGTCGAGTTCTATTTCTTTGTTATTCTCCTTTGCAGCATCAGCCTTTGCAGCTAGTTATTATCCATATTTTCTTCATCTTCTTTTCTTTAAAAGTTCTACTTTGAGAGGTTCATAAACGATATAAGGCTTACTTTCAGTTCATATTCTTAGCCATGTTCTTAAAATATGCATTTTTCACCTTTGTTCATCACTGCTGCATCAGCTCTTACATGAACTTGTGTTCTTTAAACATGCAGACCAGGTCAAAGAGGTTCCTGGAGATTCAAAAACTGAGGGAAAGCAAAAAAGAGTATGACCTGAAAACAGCAATATCTTTGTTGAAACAAATGTGTAGCACGAAATTTGTGGAAACCGCCGAAGCCCATTTTCGACTAAACATCGATCCGAAATATAACGATCAACAGCTGAGAGCAACAGTAAGTTTAAGTCCAACCCCTACTTGATTCTACTATATCTATGTCCTTCATCATCAATGCTTACTTTTCTTACAGGTTAATCTGCCCAAGGGAACTGGCCAGACAGTCAAGGTAGCTGTTCTTACTCAAGGTAAGTACTAAATTTAACTCGAGCAATGTCTTCGTTGGTTAGGATACAACATTCGATGTTAGAAGTAACGTGAGTTTTCAATGAGCTTTGGTTCGGTTTCTTTCACTTTTGAAGAACCATTATTTCGTTATCGTGAGACCATTGGGGAAAGGATATTTACATTTGATACAACTAGTTATATGAACCTTAATGGATATTATTGTCTGCATAGTGTTGTTAGGATCGCACAGCGACACGCACTCGATCTAGATGAACACAAAAAACAGGAGAGGAAATGTAAGGAGTGAAAAGTACATTTATATATGGTTCAGTTTACTAATATATAGCTCTACTTATAGCGGTTCAATTTACTATAGACCATATATAGTTCATTTAGCTTTACAAAATAATAGCCATTTATAGCTAAAGTATTGACTGATTCAGTTTACTATATATAACTTTACCAGATATAGCTATCTATACTGTATACATGTAGTATACATGTACATGTATACATGTATATATATATAGATATATGGTTCAGTTTACTATATATAGCACTACTCAAAGTCGGAAAAGAAAAGTGAAGTGAAATACCATGCAACCCATAACAAATGATAAACTTAGAAACTTAACGAAGAACTAATACATCAAATTGAATCAAGAGTATTGAAGTCGAATTCTCCGTTGAATTTGGAATAGACTTCTGAAAATTCCATCAAATATTGGTATTAAATGCGACATCCTGCCTCGTTCATATGCAAACTCTTGATCATTAGTTTCGGCCTTCCGTGAATCTTAAAAAATCGAGTTTTATGATCCAACTAGGAGTTATCTCATTGCTTTTCGGGGTGTTTCTTTTCTTCTTGATGTTTTCGTTTTCTTTTTCTCACTTGGAATTATCTCGTTGCTTTCGAAATTATATAGGCGAAAAATTCGACGAAGCGAAAAATGCAGGAGCAGATTTGGTAGGTGGTGAGGATTTGATAGAACAGATTAAAGGAGGGTTTATGGAATTTGATAAGTTAATTGCCTCACCTGATATGATGCCAAAGGTATGGTTCTTACATCTTGTTCCTATCATATACTAAGCTGGCTTTCCAACACTATACATAATTCTAATAACATTCAATAGGATTGAAGTATATTTTACGGTTTAATTTGAAATTAAGTGCTCATCGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGCATGAAAACCTCTCCCTAGTGGACGCGTTTTAAAAACCTTGAAGGAAAACCTGAAAAGGAAAGCCCAAAGAGGACAATATATGCTAGTACTTGACTTAGGCGGTTACAAATGGTATTAGAGCTAAGTACTGGGCGGTGGGCCAGTGAGGATACTGGGTCCCCCAGGAGGGTGGATTGTGAGATCCCACATCAGTTGGGGAGGGGTATGAAGCGTTCCTTATAAGGGTGTGGAAGTCTCTCTCTAGCGGACGCGTTTTAAAAACCTTGAGGGGAGACCCGAAAAGGAAAGCCCCAAAAGGACAATTTGCTAACGATAGGCTTAGTGTTACAAATGGTATTAGAATCAGATATCGGGCGGTGTGCCAACGAGGACGCTGGGCTCCCAAAAGGGGTGGATTGTGAGATCCCACATCGGTTAGAGAGGGGAACGAAACATTCCTTATAAGTGTGTAGAAACCTCTCCCTAGTAGACGTCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAAGGAAAGTCCAAAGAAGACAATATCTGCTACCTTTCTCATATGCAACTAATAACTATTTCTTCAAGCTTGTATGGATAATATTCTTGGCGACCTCTTGTACTATCGATGACTTGACTTCTAAGCTAAGATACGTTGCGTGTATTCATGTCAAAGATTAAAAGAAAATGAATAGAATTGATTCTCTCTTGGCCTCGTGCTGAAAGCCAACTGATACGTTTACGAACGATTTTGGTGTTCACTTCGGAATTGGTGCGGATTTTGAGATATTTTAGTCAGCTCGAGCAACTTTAAATGAACCATTGATTTGATATAGTCCTATCCTTTCTGTTTGTTTTAGGTTGCTAGTCTAGGGAAGCTTCTAGGACCTCGAGGACTGATGCCAAATCCGAAAGCTGGCACGGTCACAACCAATATACCTCAGGTACGTGTTCGATCTATCTACATTAGTATACCTCACAAATCGACAATGAAATCGTACTCTATGCGTTCATCCATGAGATATTGAATGATGTAGCCTTGTCCTGTTCCAGGCTATAGCGGAATTCAAGCAGGGAAAAGTCGAATACAGAGCGGATAAAACCGGGATTGTTCACTTACCTTTTGGAAAGGCAGACTTTTCTGAAGACGACCTCCTCGTGAACTTGCTTGCTGCAATAGTATGTTCTTTCCTCATCTCGAGTTCTCAAGAACTTCATTTATTTCTAAAACTCGCTTTTCTTAGCTTTATTGATACGGTTCACTTTAATCTATAATAGAAATCAGTAGAAGTAAACAAGCCAACAGGTGCTAAAGGAGTCTACTGGAAGAGCGCACACATATGCTCGTCGATGGGGCCTTCGATTCGGTTGAACACAAGGGAAATGCTCGATTACAAGATCCCGTCATCAAATGCTTGA

mRNA sequence

ATGGCAATGGCCACTTGTTGTCCCACTGTGCACTCTTCCCTTATGATGGCCCACACTTGTTCTGTTCACCCTCAAGACCTTCCTTCCCTTCTCTCCTTCCGACCCATTGCCGCCCCTTCCACCGCCAAGATTTTCCACCCCTTAATTGTCCGTAGCAGGGGAAGGAAGCCAATCAATTGGGTTGACTTTAATTTTAGGAGAGAATCTAGGGATCATTTGGTTGTGGCTGCTTTGGCTGCGGAAATTGAGGTGCCTGAGGCTGTGGAAGAGAATGGAGAAGAGGGTAATACAGCTACTTTAATTGTGCCCAAGATTAAGAAGGGCAAGGCTGCATTGCCTCTTAAAAGGGACAGGACCAGGTCAAAGAGGTTCCTGGAGATTCAAAAACTGAGGGAAAGCAAAAAAGAGTATGACCTGAAAACAGCAATATCTTTGTTGAAACAAATGTGTAGCACGAAATTTGTGGAAACCGCCGAAGCCCATTTTCGACTAAACATCGATCCGAAATATAACGATCAACAGCTGAGAGCAACAGTTAATCTGCCCAAGGGAACTGGCCAGACAGTCAAGGTAGCTGTTCTTACTCAAGGCGAAAAATTCGACGAAGCGAAAAATGCAGGAGCAGATTTGGTAGGTGGTGAGGATTTGATAGAACAGATTAAAGGAGGGTTTATGGAATTTGATAAGTTAATTGCCTCACCTGATATGATGCCAAAGGTTGCTAGTCTAGGGAAGCTTCTAGGACCTCGAGGACTGATGCCAAATCCGAAAGCTGGCACGGTCACAACCAATATACCTCAGGCTATAGCGGAATTCAAGCAGGGAAAAGTCGAATACAGAGCGGATAAAACCGGGATTGTTCACTTACCTTTTGGAAAGGCAGACTTTTCTGAAGACGACCTCCTCGTGAACTTGCTTGCTGCAATAAAATCAGTAGAAGTAAACAAGCCAACAGGTGCTAAAGGAGTCTACTGGAAGAGCGCACACATATGCTCGTCGATGGGGCCTTCGATTCGGTTGAACACAAGGGAAATGCTCGATTACAAGATCCCGTCATCAAATGCTTGA

Coding sequence (CDS)

ATGGCAATGGCCACTTGTTGTCCCACTGTGCACTCTTCCCTTATGATGGCCCACACTTGTTCTGTTCACCCTCAAGACCTTCCTTCCCTTCTCTCCTTCCGACCCATTGCCGCCCCTTCCACCGCCAAGATTTTCCACCCCTTAATTGTCCGTAGCAGGGGAAGGAAGCCAATCAATTGGGTTGACTTTAATTTTAGGAGAGAATCTAGGGATCATTTGGTTGTGGCTGCTTTGGCTGCGGAAATTGAGGTGCCTGAGGCTGTGGAAGAGAATGGAGAAGAGGGTAATACAGCTACTTTAATTGTGCCCAAGATTAAGAAGGGCAAGGCTGCATTGCCTCTTAAAAGGGACAGGACCAGGTCAAAGAGGTTCCTGGAGATTCAAAAACTGAGGGAAAGCAAAAAAGAGTATGACCTGAAAACAGCAATATCTTTGTTGAAACAAATGTGTAGCACGAAATTTGTGGAAACCGCCGAAGCCCATTTTCGACTAAACATCGATCCGAAATATAACGATCAACAGCTGAGAGCAACAGTTAATCTGCCCAAGGGAACTGGCCAGACAGTCAAGGTAGCTGTTCTTACTCAAGGCGAAAAATTCGACGAAGCGAAAAATGCAGGAGCAGATTTGGTAGGTGGTGAGGATTTGATAGAACAGATTAAAGGAGGGTTTATGGAATTTGATAAGTTAATTGCCTCACCTGATATGATGCCAAAGGTTGCTAGTCTAGGGAAGCTTCTAGGACCTCGAGGACTGATGCCAAATCCGAAAGCTGGCACGGTCACAACCAATATACCTCAGGCTATAGCGGAATTCAAGCAGGGAAAAGTCGAATACAGAGCGGATAAAACCGGGATTGTTCACTTACCTTTTGGAAAGGCAGACTTTTCTGAAGACGACCTCCTCGTGAACTTGCTTGCTGCAATAAAATCAGTAGAAGTAAACAAGCCAACAGGTGCTAAAGGAGTCTACTGGAAGAGCGCACACATATGCTCGTCGATGGGGCCTTCGATTCGGTTGAACACAAGGGAAATGCTCGATTACAAGATCCCGTCATCAAATGCTTGA

Protein sequence

MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA

Homology

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BLAST of Csor.00g005090 vs. ExPASy Swiss-Prot
Match: Q9LE95 (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 7.0e-126
Identity = 243/355 (68.45%), Postives = 279/355 (78.59%), Query Frame = 0


Query: 3   MATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINWVD 62
           MAT  P    SL  A +   + QD      F+P+   S+      L +  R R  + WVD
Sbjct: 1   MATAAPP-SLSLCYASSSFQYQQDPSFQTHFKPLLLNSS---LCRLTLNQRERSCLKWVD 60

Query: 63  FNFRRESRDHL---VVAALAAEIEVPEAVEENGEEGNTATLIVP-KIKKGKAALPLKRDR 122
           F  +++S   +   V+AA+AAE EV +  EE GE G  ATL  P K KKGKAALPLK DR
Sbjct: 61  FTSQKQSPKSVSFRVLAAVAAEAEVADMEEEEGESGGVATLPSPTKPKKGKAALPLKSDR 120

Query: 123 TRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRAT 182
           TRSKRFLEIQKLRE K+EYDLKTA+SL+KQM STKFVETAEAHFRLNIDPKYNDQQLRAT
Sbjct: 121 TRSKRFLEIQKLREIKQEYDLKTALSLMKQMSSTKFVETAEAHFRLNIDPKYNDQQLRAT 180

Query: 183 VNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMP 242
           V+LPKGTG+TVK+AVL QG+K DEAK AGAD+VGGE+LIEQIKGGFM+FDKLIA+ DMM 
Sbjct: 181 VSLPKGTGKTVKIAVLAQGDKIDEAKAAGADIVGGEELIEQIKGGFMDFDKLIATSDMMA 240

Query: 243 KVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSE 302
           KVASLG++LGPRGLMP PKAGTVT N+ QA+ EFK+GKVE+R DKTGIVH+PFGK +F E
Sbjct: 241 KVASLGRILGPRGLMPTPKAGTVTPNVAQAVEEFKKGKVEFRVDKTGIVHIPFGKLNFEE 300

Query: 303 DDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSS 354
           +DLL+NL A IKSVE NKPTGAKGVYWKSAHI SSMGPSIRLN REMLDYK PS+
Sbjct: 301 EDLLINLFATIKSVETNKPTGAKGVYWKSAHISSSMGPSIRLNIREMLDYKPPSN 351

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BLAST of Csor.00g005090 vs. ExPASy Swiss-Prot
Match: Q9LY66 (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 1.0e-124
Identity = 245/357 (68.63%), Postives = 283/357 (79.27%), Query Frame = 0


Query: 3   MATCCPTVHSSLMMAH-TCSVHPQDL---PSLLSFRPIAAPSTAKIFHPLIVRSRGR-KP 62
           MA C    HSSLM+A+   S   QDL   PSL SF   A+     +  PL++    R + 
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLFSF---ASSRPNHLSFPLLLLGGSRDRR 60

Query: 63  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRD 122
              +D    R S    +V+A+AAE ++    EE+ E+  TA L  PK KKGKAAL LKRD
Sbjct: 61  CAAID----RASNHKFIVSAVAAEADLD--TEEDLEQTATAVLDPPKPKKGKAALVLKRD 120

Query: 123 RTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRA 182
           RTRSKRFLEIQKLRE+KKEYD+ TAISLLKQ  +T+FVE+ EAHFRLNIDPKYNDQQLRA
Sbjct: 121 RTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRA 180

Query: 183 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM 242
           TV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASPDMM
Sbjct: 181 TVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMM 240

Query: 243 PKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 302
            KVA LGK+LGPRGLMPNPKAGTVT NIPQAI EFK+GKVE+RADKTGIVH+PFGK +F+
Sbjct: 241 VKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVNFT 300

Query: 303 EDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSN 355
           E+DLL+N LAA+KSVE NKP GAKGVYWKSAHICSSMGPSI+LN REM+D+K P++N
Sbjct: 301 EEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPPTAN 346

[Close]

BLAST of Csor.00g005090 vs. ExPASy Swiss-Prot
Match: P49208 (50S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=RPL1 PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 6.7e-76
Identity = 145/168 (86.31%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 105 IKKGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRL 164
           +++GK    LK DR RSKRFLEIQKLRE KKEYDLKTAISL+K+   TKFVET EAHFRL
Sbjct: 41  LRQGKLHWRLKSDRVRSKRFLEIQKLRELKKEYDLKTAISLVKETAKTKFVETVEAHFRL 100

Query: 165 NIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGF 224
           NIDPKYNDQQLRATV+LPKGTG+ +KVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGF
Sbjct: 101 NIDPKYNDQQLRATVSLPKGTGKPIKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGF 160

Query: 225 MEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEF 273
           MEFDKLIASPDMMPKVASLGK+LGPRGLMPNPKAGTVT NIPQAIAEF
Sbjct: 161 MEFDKLIASPDMMPKVASLGKILGPRGLMPNPKAGTVTANIPQAIAEF 208

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BLAST of Csor.00g005090 vs. ExPASy Swiss-Prot
Match: B0JNQ5 (50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rplA PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.3e-75
Identity = 140/230 (60.87%), Postives = 183/230 (79.57%), Query Frame = 0


Query: 121 SKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVN 180
           S+R  + Q   E+ K Y+   A++LLK++ + KF ETAEAH RL IDPKY DQQLR TV+
Sbjct: 6   SRRLRDAQAKVEN-KAYEPLEALTLLKELATAKFDETAEAHIRLGIDPKYTDQQLRTTVS 65

Query: 181 LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV 240
           LPKGTG+TV+VAV+T+GEK  EA NAGAD+VG E+LIE+I  G M+F+ LIA+PDMMPKV
Sbjct: 66  LPKGTGRTVRVAVITRGEKVQEANNAGADIVGSEELIEEIAKGMMDFEVLIATPDMMPKV 125

Query: 241 ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD 300
           A LG+ LGPRGLMP+PK GTVTT++  AIAEFK GK+E+RAD+TGIVH+ FGKA FS +D
Sbjct: 126 AKLGRQLGPRGLMPSPKGGTVTTDLTGAIAEFKAGKLEFRADRTGIVHVQFGKASFSAED 185

Query: 301 LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKI 351
           LLVNL A  ++V+ N+P+GAKG YW++ ++ SSMGPSI+++   + D K+
Sbjct: 186 LLVNLKALQETVDRNRPSGAKGRYWRTVYVSSSMGPSIQVDISALRDLKL 234

[Close]

BLAST of Csor.00g005090 vs. ExPASy Swiss-Prot
Match: Q3MA18 (50S ribosomal protein L1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rplA PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.7e-74
Identity = 138/230 (60.00%), Postives = 180/230 (78.26%), Query Frame = 0


Query: 121 SKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVN 180
           S+R  E+Q   E  +EY    A+SLLK+  + KF E AEAH RL IDPKY DQQLR TV 
Sbjct: 6   SRRLRELQAKVED-REYGPLDALSLLKETATAKFAEAAEAHIRLGIDPKYTDQQLRTTVA 65

Query: 181 LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV 240
           LPKGTGQ V+VAV+ +GEK  EA NAGAD+ G E+LI++I+ G M+FDKLIA+PD+MP+V
Sbjct: 66  LPKGTGQIVRVAVIARGEKVTEASNAGADVFGSEELIDEIQKGRMDFDKLIATPDVMPQV 125

Query: 241 ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD 300
           A LGK+LGPRGLMP+PK GTVT +I  AIAEFK GK+E+RAD+TGIVH+ FGKA FS +D
Sbjct: 126 AKLGKMLGPRGLMPSPKGGTVTFDIASAIAEFKAGKLEFRADRTGIVHVMFGKASFSPED 185

Query: 301 LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKI 351
           LLVNL A  ++++ N+P+GAKG YW++ ++ ++MGPSIR++   + DYK+
Sbjct: 186 LLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKL 234

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BLAST of Csor.00g005090 vs. NCBI nr
Match: KAG6593282.1 (50S ribosomal protein L1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 696 bits (1796), Expect = 1.73e-252
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0


Query: 1   MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINW 60
           MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINW
Sbjct: 1   MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINW 60

Query: 61  VDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRDRTR 120
           VDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRDRTR
Sbjct: 61  VDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRDRTR 120

Query: 121 SKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVN 180
           SKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVN
Sbjct: 121 SKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVN 180

Query: 181 LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV 240
           LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV
Sbjct: 181 LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV 240

Query: 241 ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD 300
           ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD
Sbjct: 241 ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD 300

Query: 301 LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355
           LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA
Sbjct: 301 LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355

[Close]

BLAST of Csor.00g005090 vs. NCBI nr
Match: XP_022960486.1 (50S ribosomal protein L1, chloroplastic-like [Cucurbita moschata] >KAG7025633.1 50S ribosomal protein L1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 694 bits (1790), Expect = 1.42e-251
Identity = 354/355 (99.72%), Postives = 354/355 (99.72%), Query Frame = 0


Query: 1   MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINW 60
           MAMATCCPTVHSSL MAHTCSVHPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINW
Sbjct: 1   MAMATCCPTVHSSLTMAHTCSVHPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINW 60

Query: 61  VDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRDRTR 120
           VDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRDRTR
Sbjct: 61  VDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRDRTR 120

Query: 121 SKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVN 180
           SKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVN
Sbjct: 121 SKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVN 180

Query: 181 LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV 240
           LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV
Sbjct: 181 LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV 240

Query: 241 ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD 300
           ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD
Sbjct: 241 ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD 300

Query: 301 LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355
           LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA
Sbjct: 301 LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355

[Close]

BLAST of Csor.00g005090 vs. NCBI nr
Match: XP_023515181.1 (50S ribosomal protein L1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 681 bits (1758), Expect = 1.20e-246
Identity = 351/358 (98.04%), Postives = 352/358 (98.32%), Query Frame = 0


Query: 1   MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINW 60
           MAMATCCPTVHSSL MAHTCSV+PQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINW
Sbjct: 1   MAMATCCPTVHSSLTMAHTCSVYPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINW 60

Query: 61  VDFNFRRESRDHLVV---AALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRD 120
           VD NFRRESRDHLVV   AALAAEIEVPEAVEENGEE NTATLIVPKIKKGKAALPLKRD
Sbjct: 61  VDLNFRRESRDHLVVPALAALAAEIEVPEAVEENGEEANTATLIVPKIKKGKAALPLKRD 120

Query: 121 RTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRA 180
           RTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 181 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM 240
           TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM 240

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
           PKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS
Sbjct: 241 PKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300

Query: 301 EDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355
           EDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA
Sbjct: 301 EDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 358

[Close]

BLAST of Csor.00g005090 vs. NCBI nr
Match: XP_023004585.1 (50S ribosomal protein L1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 665 bits (1715), Expect = 4.29e-240
Identity = 344/358 (96.09%), Postives = 346/358 (96.65%), Query Frame = 0


Query: 1   MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIF---HPLIVRSRGRKP 60
           MAMATCCP VHSSL MAHT SVHP DLPSLLSFRPIAA STAKI    HP I+RSRG KP
Sbjct: 1   MAMATCCPAVHSSLTMAHTSSVHPLDLPSLLSFRPIAASSTAKILSLSHPFILRSRGGKP 60

Query: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRD 120
           INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEE +TATLIVPKIKKGKAALPLKRD
Sbjct: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEASTATLIVPKIKKGKAALPLKRD 120

Query: 121 RTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRA 180
           RTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 181 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM 240
           TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM 240

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
           PKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS
Sbjct: 241 PKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300

Query: 301 EDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355
           EDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA
Sbjct: 301 EDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 358

[Close]

BLAST of Csor.00g005090 vs. NCBI nr
Match: XP_022152504.1 (50S ribosomal protein L1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 629 bits (1621), Expect = 9.73e-226
Identity = 328/360 (91.11%), Postives = 336/360 (93.33%), Query Frame = 0


Query: 1   MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIF---HPLIVRSRGRKP 60
           MAMATC PT  SSL MAHT SVHPQD+PSLLSFRP+AA STA IF   HPL V+ RG + 
Sbjct: 1   MAMATCSPTARSSLTMAHTSSVHPQDIPSLLSFRPMAASSTATIFSLCHPLTVQRRGGRS 60

Query: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEG--NTATLIVPKIKKGKAALPLK 120
           INWVD NFRRESRDHLVVAALAAEIEV E VEENGEEG    AT +VPK+K+GKAALPLK
Sbjct: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGVAGLATSVVPKLKRGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQM STKFVETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355
           FSEDDLLVNLLAA+KSVEVNKPTGAKGVYWKSAHICSSMGPSIRLN REMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAVKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA 360

[Close]

BLAST of Csor.00g005090 vs. ExPASy TrEMBL
Match: A0A6J1H7Q8 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111461210 PE=3 SV=1)

HSP 1 Score: 694 bits (1790), Expect = 6.88e-252
Identity = 354/355 (99.72%), Postives = 354/355 (99.72%), Query Frame = 0


Query: 1   MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINW 60
           MAMATCCPTVHSSL MAHTCSVHPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINW
Sbjct: 1   MAMATCCPTVHSSLTMAHTCSVHPQDLPSLLSFRPIAAPSTAKIFHPLIVRSRGRKPINW 60

Query: 61  VDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRDRTR 120
           VDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRDRTR
Sbjct: 61  VDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRDRTR 120

Query: 121 SKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVN 180
           SKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVN
Sbjct: 121 SKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVN 180

Query: 181 LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV 240
           LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV
Sbjct: 181 LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV 240

Query: 241 ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD 300
           ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD
Sbjct: 241 ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD 300

Query: 301 LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355
           LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA
Sbjct: 301 LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355

[Close]

BLAST of Csor.00g005090 vs. ExPASy TrEMBL
Match: A0A6J1KV03 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111497839 PE=3 SV=1)

HSP 1 Score: 665 bits (1715), Expect = 2.08e-240
Identity = 344/358 (96.09%), Postives = 346/358 (96.65%), Query Frame = 0


Query: 1   MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIF---HPLIVRSRGRKP 60
           MAMATCCP VHSSL MAHT SVHP DLPSLLSFRPIAA STAKI    HP I+RSRG KP
Sbjct: 1   MAMATCCPAVHSSLTMAHTSSVHPLDLPSLLSFRPIAASSTAKILSLSHPFILRSRGGKP 60

Query: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRD 120
           INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEE +TATLIVPKIKKGKAALPLKRD
Sbjct: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEASTATLIVPKIKKGKAALPLKRD 120

Query: 121 RTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRA 180
           RTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRA
Sbjct: 121 RTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRA 180

Query: 181 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM 240
           TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM
Sbjct: 181 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM 240

Query: 241 PKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300
           PKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS
Sbjct: 241 PKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 300

Query: 301 EDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355
           EDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA
Sbjct: 301 EDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 358

[Close]

BLAST of Csor.00g005090 vs. ExPASy TrEMBL
Match: A0A6J1DG73 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020212 PE=3 SV=1)

HSP 1 Score: 629 bits (1621), Expect = 4.71e-226
Identity = 328/360 (91.11%), Postives = 336/360 (93.33%), Query Frame = 0


Query: 1   MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIF---HPLIVRSRGRKP 60
           MAMATC PT  SSL MAHT SVHPQD+PSLLSFRP+AA STA IF   HPL V+ RG + 
Sbjct: 1   MAMATCSPTARSSLTMAHTSSVHPQDIPSLLSFRPMAASSTATIFSLCHPLTVQRRGGRS 60

Query: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEG--NTATLIVPKIKKGKAALPLK 120
           INWVD NFRRESRDHLVVAALAAEIEV E VEENGEEG    AT +VPK+K+GKAALPLK
Sbjct: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGVAGLATSVVPKLKRGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQM STKFVETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355
           FSEDDLLVNLLAA+KSVEVNKPTGAKGVYWKSAHICSSMGPSIRLN REMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAVKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA 360

[Close]

BLAST of Csor.00g005090 vs. ExPASy TrEMBL
Match: A0A0A0K886 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_7G420870 PE=3 SV=1)

HSP 1 Score: 618 bits (1594), Expect = 6.11e-222
Identity = 325/360 (90.28%), Postives = 334/360 (92.78%), Query Frame = 0


Query: 1   MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIF---HPLIVRSRGRKP 60
           MAMATC PT+HSSL MAHT SVHPQD  SLLSFRPIAA STA IF   HPLI++ RG + 
Sbjct: 1   MAMATCNPTLHSSLTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60

Query: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGN--TATLIVPKIKKGKAALPLK 120
           INWVD  F RE RDHLVVAALAAEIEV E VEENGEEGN  TAT ++PKIKKGKAALPLK
Sbjct: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ  STKFVETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEK DEAKNAGADLVGG+DLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKLDEAKNAGADLVGGKDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355
           FSEDDLLVNLL+AIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 360

[Close]

BLAST of Csor.00g005090 vs. ExPASy TrEMBL
Match: A0A5D3CGN7 (Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00300 PE=3 SV=1)

HSP 1 Score: 613 bits (1582), Expect = 4.12e-220
Identity = 323/360 (89.72%), Postives = 329/360 (91.39%), Query Frame = 0


Query: 1   MAMATCCPTVHSSLMMAHTCSVHPQDLPSLLSFRPIAAPSTAKIF---HPLIVRSRGRKP 60
           MAMATC PTVHSS  MAHT SVHPQD  SLLSFRPIAA STA IF   HPLI++ RG + 
Sbjct: 1   MAMATCNPTVHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60

Query: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGN--TATLIVPKIKKGKAALPLK 120
            NWVD  F RE RDHLVVAALAAEIEV E VEENGEEGN  TAT  +PKIKKGKAALPLK
Sbjct: 61  TNWVDLKFGRECRDHLVVAALAAEIEVAEVVEENGEEGNGGTATSALPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ  STKF ETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFAETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 355
           FSEDDLLVNLL+AIKSVE NKPTGAKGVYWKSAHICSSMGPSIRLN REMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLSAIKSVEANKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA 360

[Close]

BLAST of Csor.00g005090 vs. TAIR 10
Match: AT3G63490.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 448.0 bits (1151), Expect = 7.2e-126
Identity = 245/357 (68.63%), Postives = 283/357 (79.27%), Query Frame = 0


Query: 3   MATCCPTVHSSLMMAH-TCSVHPQDL---PSLLSFRPIAAPSTAKIFHPLIVRSRGR-KP 62
           MA C    HSSLM+A+   S   QDL   PSL SF   A+     +  PL++    R + 
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLFSF---ASSRPNHLSFPLLLLGGSRDRR 60

Query: 63  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRD 122
              +D    R S    +V+A+AAE ++    EE+ E+  TA L  PK KKGKAAL LKRD
Sbjct: 61  CAAID----RASNHKFIVSAVAAEADLD--TEEDLEQTATAVLDPPKPKKGKAALVLKRD 120

Query: 123 RTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRA 182
           RTRSKRFLEIQKLRE+KKEYD+ TAISLLKQ  +T+FVE+ EAHFRLNIDPKYNDQQLRA
Sbjct: 121 RTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRA 180

Query: 183 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM 242
           TV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASPDMM
Sbjct: 181 TVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMM 240

Query: 243 PKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFS 302
            KVA LGK+LGPRGLMPNPKAGTVT NIPQAI EFK+GKVE+RADKTGIVH+PFGK +F+
Sbjct: 241 VKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVNFT 300

Query: 303 EDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSN 355
           E+DLL+N LAA+KSVE NKP GAKGVYWKSAHICSSMGPSI+LN REM+D+K P++N
Sbjct: 301 EEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPPTAN 346

[Close]

BLAST of Csor.00g005090 vs. TAIR 10
Match: AT3G63490.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 307.8 bits (787), Expect = 1.2e-83
Identity = 184/296 (62.16%), Postives = 214/296 (72.30%), Query Frame = 0


Query: 3   MATCCPTVHSSLMMAH-TCSVHPQDL---PSLLSFRPIAAPSTAKIFHPLIVRSRGR-KP 62
           MA C    HSSLM+A+   S   QDL   PSL SF   A+     +  PL++    R + 
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLFSF---ASSRPNHLSFPLLLLGGSRDRR 60

Query: 63  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEGNTATLIVPKIKKGKAALPLKRD 122
              +D    R S    +V+A+AAE ++    EE+ E+  TA L  PK KKGKAAL LKRD
Sbjct: 61  CAAID----RASNHKFIVSAVAAEADLD--TEEDLEQTATAVLDPPKPKKGKAALVLKRD 120

Query: 123 RTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQLRA 182
           RTRSKRFLEIQKLRE+KKEYD+ TAISLLKQ  +T+FVE+ EAHFRLNIDPKYNDQQLRA
Sbjct: 121 RTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRA 180

Query: 183 TVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMM 242
           TV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASPDMM
Sbjct: 181 TVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMM 240

Query: 243 PKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGK 294
            KVA LGK+LGPRGLMPNPKAGTVT NIPQ+    ++GK+     K G+     GK
Sbjct: 241 VKVAGLGKILGPRGLMPNPKAGTVTANIPQS---SRRGKLNSEQTKLGLFTFHLGK 282

[Close]

BLAST of Csor.00g005090 vs. TAIR 10
Match: AT2G42710.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 164.1 bits (414), Expect = 2.1e-40
Identity = 97/255 (38.04%), Postives = 143/255 (56.08%), Query Frame = 0


Query: 87  AVEENGEEGNTATLIVPKIKKGKAALPLKRDRTRSKRFLEIQKLRESKKEYDLKTAISLL 146
           AVEE+       TL+ P++K GK                        K  +DL  AI  +
Sbjct: 162 AVEEDTSSLPLPTLLKPELKHGK------------------------KPIFDLMEAIREI 221

Query: 147 KQMCSTKFVETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNA 206
           K     KF ET EAH RL I+   ++  +R T+ LP    + VKVA   +G   ++AK A
Sbjct: 222 KGNAKAKFDETLEAHVRLGIEKGRSELIVRGTLALPHSVKKDVKVAFFAEGADAEDAKAA 281

Query: 207 GADLVGGEDLIEQI-KGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNI 266
           GAD+VGG +LIE+I K G ++FD+ +A+P MMP+V  + ++L   GLMPNPK G+VT ++
Sbjct: 282 GADVVGGLELIEEILKSGKIDFDRCLATPKMMPRVYKISRILNNHGLMPNPKQGSVTKDV 341

Query: 267 PQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDDLLVNLLAAIKSVEVNKPTGAKGV-- 326
            +A+ + K G  ++R DKT I+H+P GK  FSE+ L  N+ A + ++ + KP G K    
Sbjct: 342 TKAVKDAKAGHTKFRMDKTSILHVPLGKMSFSEEALRENVGAFMNALLLAKPAGLKKTSK 392

Query: 327 ---YWKSAHICSSMG 336
              Y  + H+CS+MG
Sbjct: 402 YAGYVNAFHLCSTMG 392

The following BLAST results are available for this feature:

BLAST of Csor.00g005090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE95	7.0e-126	68.45	50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=...	[more]
Q9LY66	1.0e-124	68.63	50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 ...	[more]
P49208	6.7e-76	86.31	50S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=R...	[more]
B0JNQ5	4.3e-75	60.87	50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 G...	[more]
Q3MA18	3.7e-74	60.00	50S ribosomal protein L1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937)...	[more]

BLAST of Csor.00g005090 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593282.1	1.73e-252	100.00	50S ribosomal protein L1, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022960486.1	1.42e-251	99.72	50S ribosomal protein L1, chloroplastic-like [Cucurbita moschata] >KAG7025633.1 ...	[more]
XP_023515181.1	1.20e-246	98.04	50S ribosomal protein L1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004585.1	4.29e-240	96.09	50S ribosomal protein L1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022152504.1	9.73e-226	91.11	50S ribosomal protein L1, chloroplastic-like [Momordica charantia]	[more]

BLAST of Csor.00g005090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7Q8	6.88e-252	99.72	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111461210 PE=3 SV=1	[more]
A0A6J1KV03	2.08e-240	96.09	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111497839 PE=3 SV=1	[more]
A0A6J1DG73	4.71e-226	91.11	Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020212 PE=3 SV=1	[more]
A0A0A0K886	6.11e-222	90.28	Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_7G420870 PE=3 SV=1	[more]
A0A5D3CGN7	4.12e-220	89.72	Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00...	[more]

BLAST of Csor.00g005090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63490.1	7.2e-126	68.63	Ribosomal protein L1p/L10e family	[more]
AT3G63490.2	1.2e-83	62.16	Ribosomal protein L1p/L10e family	[more]
AT2G42710.1	2.1e-40	38.04	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.190.20		coord: 137..340 e-value: 2.0E-82 score: 277.7
None	No IPR available	PANTHER	PTHR23105:SF110	MITOCHONDRIAL RIBOSOMAL PROTEIN, LARGE	coord: 134..347
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 134..347
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 184..275 e-value: 2.0E-82 score: 277.7
IPR005878	Ribosomal protein L1, bacterial-type	TIGRFAM	TIGR01169	TIGR01169	coord: 120..344 e-value: 9.4E-94 score: 311.0
IPR005878	Ribosomal protein L1, bacterial-type	HAMAP	MF_01318_B	Ribosomal_L1_B	coord: 115..345 score: 39.367043
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 146..336 e-value: 1.2E-47 score: 162.3
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 139..340 e-value: 2.17636E-72 score: 222.059
IPR023673	Ribosomal protein L1, conserved site	PROSITE	PS01199	RIBOSOMAL_L1	coord: 237..255
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 123..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g005090.m01	Csor.00g005090.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding