Csor.00g004650 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g004650
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein trichome birefringence-like 14
Location	Csor_Chr08: 3245600 .. 3247471 (-)
RNA-Seq Expression	Csor.00g004650
Synteny	Csor.00g004650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGCAACCATATTGTTATGGGCTTGGGATAAAAGCTATTTTGCCAGTTTTCTTCCAGTAACAAGAGAGCAGTTTATGATACCAGTTTCAGGTATTTAAGATGCTTCTTTCTACTGTTTAAGATGTGTCTATTTAATCTATGTTAAGAATGAGATGAATATGCAAAACTTCGGTGGGATAAAAATGGTAGATCTCTAAGCCTTGTTGATACGATAAGGAATCAACTACAAGGGGAATAAGATTCGGATTACCTTGTTGATCGAATATCTCAAGGCAAGAACACTTGATTGAGATTCGAATCACTCCACAAGCAAGATCGATCATGTCTAGCTTGAATGATTCTTGTTGATCAAATATCTCAAACACTTGTTTGAGATTCGAATCACTCCACAAGCAAGATTGATCATGTCGAGCTTGAATGATTCTACATGCAATCTAAACTAAATAGAATTGCAAAGAAACTCAGCCATTGGCTAAGAAAAAGCACAAATGCTTCTTTTAATATATTTTCCAAATCTCTTACAAATACAACCTACATGGCTTTATATAGACTCAAAATGAAACTACTAAATGCATTGCAAGAGTTGTAACATTCATACTTAATGGCCATAATGAGCCATTATGTAAATGTAACCTAAAAAATCTTAAAATACAATAACTCTAAATTACTCTAAATTGTAACCCACCCAAAATTTTATCTTCAAAGTAGATAATATCAATATCACTGTGGAGAGTCGTGATTTCTAACACTTTCAATGGCAACCTGACTTGAATTCTAATTTTCATTTCCATTTCCATTTTTACTGTTGTTTTTGGAACGTAAAATTTGAATTGTTTGATTGAGAAGTGAAACATGGAGTGGTTGTGATGGTTTCTTCACGTTCTAAAGATCAGTATACTAATCAGCTAGTGCATGCTCTACCACTGAAACAAGCATGTTTTTCTAACTCCTCTGTGAAAAACGACTGTTTAAACTTGATTTACGTTTTCTGTCATGTTTGATCGTCGAATTCTGTAATTTGTATTGTGTGCTGGTAACTCATGGATTAATTTTTTCTATCATGACTTAGAATATGTAGTGGACGTGTCAAATAGTTCCTCAATATCGACTAAGCCGAAAGACGAAATGGCTAAGTCAGAGGATGAGATAGCTAAGTTAGAGGATAAAATGAAGGAAAGAAGTAACAATACTGATGAAAAAGAACAGCCAGGACTTCTTATCCCAAAAAAAGAACAGCCAGGAAAAAGCACGAACTACTCAGATGCTGGTTCTGTCTCCAAGCCCACTCCTCCATTGAAAGAACGCGAAGATGGCGTTACCTCGTCTTCTTCGTCAAAAGGTATCAGTTAGATTATTAGCACAGATTTCCACAATGCTACGATATTTGTTCTTGTCTCTGAGGCGTGGCCTTGTTTAACTTAAGTTTTGAGATGGTAGGCACAGATTTGTTTATTGTTCTTAGTTTTACCTCTAAGCAGAATCAGCTTTTGTTGAACATGCCATCGACCACATTTTCTCGATTCATGCATCGATTATGTTGTTCATGTCGTTTCTAAGATATTATTGCTCATTCAGTGTGCAACTACGCCAAAGGTAGATGGGTTGAAGACAGCAGGCGGCCATGGTATTCTGGATTACAATGTAAAAAATGGCTATCAATAATGTGGGCTTGTAGACTTACAAAAAGAAAGGACTTTTCTTATGAAGGATATAGGTGGCAACCCGAAAATTGCTACATGCCAGAGTTTGAGCGTTCTTCATTCTTGAAAAGGTATCGAGATTCTAACCCCACGTGTGTTGCTACTTGCTTCATTAGGATAGCTATGCATTCGACTTTACGATCCCATGAGCGTATTTCAGCGATTTGA

mRNA sequence

ATGCTTGCAACCATATTGTTATGGGCTTGGGATAAAAGCTATTTTGCCAGTTTTCTTCCAGTAACAAGAGAGCAGTTTATGATACCAGTTTCAGAATATGTAGTGGACGTGTCAAATAGTTCCTCAATATCGACTAAGCCGAAAGACGAAATGGCTAAGTCAGAGGATGAGATAGCTAAGTTAGAGGATAAAATGAAGGAAAGAAGTAACAATACTGATGAAAAAGAACAGCCAGGACTTCTTATCCCAAAAAAAGAACAGCCAGGAAAAAGCACGAACTACTCAGATGCTGGTTCTGTCTCCAAGCCCACTCCTCCATTGAAAGAACGCGAAGATGGCGTTACCTCGTCTTCTTCGTCAAAAGTGTGCAACTACGCCAAAGGTAGATGGGTTGAAGACAGCAGGCGGCCATGGTATTCTGGATTACAATGTAAAAAATGGCTATCAATAATGTGGGCTTGTAGACTTACAAAAAGAAAGGACTTTTCTTATGAAGGATATAGGTGGCAACCCGAAAATTGCTACATGCCAGAGTTTGAGCGTTCTTCATTCTTGAAAAGGTATCGAGATTCTAACCCCACGTGTGTTGCTACTTGCTTCATTAGGATAGCTATGCATTCGACTTTACGATCCCATGAGCGTATTTCAGCGATTTGA

Coding sequence (CDS)

ATGCTTGCAACCATATTGTTATGGGCTTGGGATAAAAGCTATTTTGCCAGTTTTCTTCCAGTAACAAGAGAGCAGTTTATGATACCAGTTTCAGAATATGTAGTGGACGTGTCAAATAGTTCCTCAATATCGACTAAGCCGAAAGACGAAATGGCTAAGTCAGAGGATGAGATAGCTAAGTTAGAGGATAAAATGAAGGAAAGAAGTAACAATACTGATGAAAAAGAACAGCCAGGACTTCTTATCCCAAAAAAAGAACAGCCAGGAAAAAGCACGAACTACTCAGATGCTGGTTCTGTCTCCAAGCCCACTCCTCCATTGAAAGAACGCGAAGATGGCGTTACCTCGTCTTCTTCGTCAAAAGTGTGCAACTACGCCAAAGGTAGATGGGTTGAAGACAGCAGGCGGCCATGGTATTCTGGATTACAATGTAAAAAATGGCTATCAATAATGTGGGCTTGTAGACTTACAAAAAGAAAGGACTTTTCTTATGAAGGATATAGGTGGCAACCCGAAAATTGCTACATGCCAGAGTTTGAGCGTTCTTCATTCTTGAAAAGGTATCGAGATTCTAACCCCACGTGTGTTGCTACTTGCTTCATTAGGATAGCTATGCATTCGACTTTACGATCCCATGAGCGTATTTCAGCGATTTGA

Protein sequence

MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAKLEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSSKVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFERSSFLKRYRDSNPTCVATCFIRIAMHSTLRSHERISAI

Homology

[Close]

BLAST of Csor.00g004650 vs. ExPASy Swiss-Prot
Match: Q0WPS0 (Protein trichome birefringence-like 14 OS=Arabidopsis thaliana OX=3702 GN=TBL14 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26
Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 109 EREDGVTSSSSSKVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYR 168
           +R+   +SSSSS VCN+AKG+WVED +RP YSG +CK+WLS MW+CR+  R DFS+EGYR
Sbjct: 43  KRQFSSSSSSSSSVCNFAKGKWVEDRKRPLYSGFECKQWLSSMWSCRIMGRPDFSFEGYR 102

Query: 169 WQPENCYMPEFERSSFLKRYRD 191
           WQPE C MP+F+R +FL R ++
Sbjct: 103 WQPEGCNMPQFDRFTFLTRMQN 124

[Close]

BLAST of Csor.00g004650 vs. ExPASy Swiss-Prot
Match: F4K5L5 (Protein trichome birefringence-like 16 OS=Arabidopsis thaliana OX=3702 GN=TBL16 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.8e-22
Identity = 73/240 (30.42%), Postives = 112/240 (46.67%), Query Frame = 0


Query: 3   ATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTK---------------- 62
           AT+++W WD++  ++FLP       +   E V  +  + +  TK                
Sbjct: 41  ATVVIWTWDRTPTSAFLPPESHYLKLQSEEKVEKLPTALNTETKDSYSSAIPFVNKEESK 100

Query: 63  ------------------------------PKDEMAKSEDEIAKLEDKMKERSNNTD--- 122
                                         P  E  K E E+   E K ++     D   
Sbjct: 101 EDSSDNKDTEEEEEKQVEEVTVSNTNRGKIPTIEEKKGEHEVIASEPKYRKTPTREDFKL 160

Query: 123 EKEQPGLLIPKKEQPGKSTNYSDAGSVSKPT--PPLKEREDGV-TSSSSSKVCNYAKGRW 182
           EK +  + + + E   ++T+  +  S  K       +ER DG  T+  +++ CNYAKG+W
Sbjct: 161 EKVKHEVAVGEGEAT-ETTHIKETNSDPKSNILATDEERTDGTSTARITNQACNYAKGKW 220

Query: 183 VEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFERSSFLKRYRD 191
           V D+ RP YSG QCK+WL+ MWACRL +R DF++E  RWQP++C M EFE S FL+R ++
Sbjct: 221 VVDNHRPLYSGSQCKQWLASMWACRLMQRTDFAFESLRWQPKDCSMEEFEGSKFLRRMKN 279

[Close]

BLAST of Csor.00g004650 vs. ExPASy Swiss-Prot
Match: O80940 (Protein trichome birefringence-like 15 OS=Arabidopsis thaliana OX=3702 GN=TBL15 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.9e-22
Identity = 42/70 (60.00%), Postives = 55/70 (78.57%), Query Frame = 0


Query: 121 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 180
           K CN AKG WVED +RP YSG +CK+WLS +++CR+  R DFS+EGYRWQPE C +PEF 
Sbjct: 141 KTCNLAKGEWVEDKKRPLYSGFECKQWLSNIFSCRVMGRPDFSFEGYRWQPEGCNIPEFN 200

Query: 181 RSSFLKRYRD 191
           R +FL+R ++
Sbjct: 201 RVNFLRRMQN 210

[Close]

BLAST of Csor.00g004650 vs. ExPASy Swiss-Prot
Match: Q67XC4 (Protein trichome birefringence-like 40 OS=Arabidopsis thaliana OX=3702 GN=TBL40 PE=2 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-09
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 115 TSSSSSKVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENC 174
           TS  S   CN A+G+WV DS  P YS   C  ++   + C+   R D +Y+ +RWQP +C
Sbjct: 37  TSLLSGGRCNLARGKWVYDSSYPLYSAFSC-PFIDSEFNCQKAGRPDTNYQHFRWQPFSC 96

Query: 175 YMPEFERSSFLKRYR 190
            +P F+ ++F++R R
Sbjct: 97  PLPRFDGANFMRRMR 110

[Close]

BLAST of Csor.00g004650 vs. ExPASy Swiss-Prot
Match: O80919 (Protein trichome birefringence-like 34 OS=Arabidopsis thaliana OX=3702 GN=TBL34 PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 8.1e-08
Identity = 33/89 (37.08%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 105 PPLKEREDGVT--SSSSSKVCNYAKGRWVEDS-RRPWYSGLQCKKWLSIMWACRLTKRKD 164
           P    +  GVT     S + CN  +G+WV D+   P Y    C K++S   AC    RKD
Sbjct: 39  PKENPQSHGVTDRGGDSGRECNLFEGKWVFDNVSYPLYKEEDC-KFMSDQLACEKFGRKD 98

Query: 165 FSYEGYRWQPENCYMPEFERSSFLKRYRD 191
            SY+ +RWQP  C +P F  +  L+R R+
Sbjct: 99  LSYKFWRWQPHTCDLPRFNGTKLLERLRN 126

[Close]

BLAST of Csor.00g004650 vs. NCBI nr
Match: KAG6593326.1 (Protein trichome birefringence-like 14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 443 bits (1140), Expect = 4.30e-157
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK 60
           MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK
Sbjct: 1   MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK 60

Query: 61  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS 120
           LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS
Sbjct: 61  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS 120

Query: 121 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 180
           KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE
Sbjct: 121 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 180

Query: 181 RSSFLKRYRDSNPTCVATCFIRIAMHSTLRSHERISAI 218
           RSSFLKRYRDSNPTCVATCFIRIAMHSTLRSHERISAI
Sbjct: 181 RSSFLKRYRDSNPTCVATCFIRIAMHSTLRSHERISAI 218

[Close]

BLAST of Csor.00g004650 vs. NCBI nr
Match: XP_022960283.1 (protein trichome birefringence-like 14 [Cucurbita moschata])

HSP 1 Score: 377 bits (969), Expect = 4.17e-127
Identity = 185/190 (97.37%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK 60
           MLAT+LLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTK KDEMAKSEDEIAK
Sbjct: 22  MLATMLLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKSKDEMAKSEDEIAK 81

Query: 61  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS 120
           LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSS+
Sbjct: 82  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSA 141

Query: 121 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 180
           KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE
Sbjct: 142 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 201

Query: 181 RSSFLKRYRD 190
           RSSFLKR +D
Sbjct: 202 RSSFLKRMQD 211

[Close]

BLAST of Csor.00g004650 vs. NCBI nr
Match: XP_023514948.1 (protein trichome birefringence-like 14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371 bits (953), Expect = 1.10e-124
Identity = 182/190 (95.79%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 1   MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK 60
           MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSN SSISTKPKD+M KSEDEIAK
Sbjct: 22  MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNRSSISTKPKDKMGKSEDEIAK 81

Query: 61  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS 120
           LEDKMKERSNNTDEKEQPGLLI KKEQPGKSTNYSDAGSVSKPTPPLKE EDGVTSSSSS
Sbjct: 82  LEDKMKERSNNTDEKEQPGLLIQKKEQPGKSTNYSDAGSVSKPTPPLKESEDGVTSSSSS 141

Query: 121 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 180
           KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE
Sbjct: 142 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 201

Query: 181 RSSFLKRYRD 190
           RSSFL+R +D
Sbjct: 202 RSSFLRRMQD 211

[Close]

BLAST of Csor.00g004650 vs. NCBI nr
Match: XP_023004529.1 (protein trichome birefringence-like 14 [Cucurbita maxima])

HSP 1 Score: 368 bits (945), Expect = 1.80e-123
Identity = 180/190 (94.74%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 1   MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK 60
           MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVV+VSN SSISTKPK+EM KSEDEIAK
Sbjct: 22  MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVNVSNRSSISTKPKEEMGKSEDEIAK 81

Query: 61  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS 120
           LEDKMKERSNNTDEK+QPGLLI KKEQPGKSTNYSDAGSVSKPTPPLKE EDGVTSSSSS
Sbjct: 82  LEDKMKERSNNTDEKDQPGLLIQKKEQPGKSTNYSDAGSVSKPTPPLKESEDGVTSSSSS 141

Query: 121 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 180
           KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE
Sbjct: 142 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 201

Query: 181 RSSFLKRYRD 190
           RSSFL+R +D
Sbjct: 202 RSSFLRRMQD 211

[Close]

BLAST of Csor.00g004650 vs. NCBI nr
Match: KAG7025673.1 (Protein trichome birefringence-like 14 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291 bits (746), Expect = 1.03e-93
Identity = 157/196 (80.10%), Postives = 159/196 (81.12%), Query Frame = 0


Query: 1   MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK 60
           +LATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK
Sbjct: 22  VLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK 81

Query: 61  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS 120
           LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS
Sbjct: 82  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS 141

Query: 121 K------VCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENC 180
           K      VCNYAKGRWVEDSRRPW                              WQPENC
Sbjct: 142 KDIIAHSVCNYAKGRWVEDSRRPW------------------------------WQPENC 187

Query: 181 YMPEFERSSFLKRYRD 190
           YMPEFERSSFLKR +D
Sbjct: 202 YMPEFERSSFLKRMQD 187

[Close]

BLAST of Csor.00g004650 vs. ExPASy TrEMBL
Match: A0A6J1H8E4 (protein trichome birefringence-like 14 OS=Cucurbita moschata OX=3662 GN=LOC111461071 PE=3 SV=1)

HSP 1 Score: 377 bits (969), Expect = 2.02e-127
Identity = 185/190 (97.37%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK 60
           MLAT+LLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTK KDEMAKSEDEIAK
Sbjct: 22  MLATMLLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKSKDEMAKSEDEIAK 81

Query: 61  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS 120
           LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSS+
Sbjct: 82  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSA 141

Query: 121 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 180
           KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE
Sbjct: 142 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 201

Query: 181 RSSFLKRYRD 190
           RSSFLKR +D
Sbjct: 202 RSSFLKRMQD 211

[Close]

BLAST of Csor.00g004650 vs. ExPASy TrEMBL
Match: A0A6J1KWI4 (protein trichome birefringence-like 14 OS=Cucurbita maxima OX=3661 GN=LOC111497805 PE=3 SV=1)

HSP 1 Score: 368 bits (945), Expect = 8.69e-124
Identity = 180/190 (94.74%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 1   MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK 60
           MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVV+VSN SSISTKPK+EM KSEDEIAK
Sbjct: 22  MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVNVSNRSSISTKPKEEMGKSEDEIAK 81

Query: 61  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS 120
           LEDKMKERSNNTDEK+QPGLLI KKEQPGKSTNYSDAGSVSKPTPPLKE EDGVTSSSSS
Sbjct: 82  LEDKMKERSNNTDEKDQPGLLIQKKEQPGKSTNYSDAGSVSKPTPPLKESEDGVTSSSSS 141

Query: 121 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 180
           KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE
Sbjct: 142 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 201

Query: 181 RSSFLKRYRD 190
           RSSFL+R +D
Sbjct: 202 RSSFLRRMQD 211

[Close]

BLAST of Csor.00g004650 vs. ExPASy TrEMBL
Match: A0A1S3CEB0 (protein trichome birefringence-like 14 OS=Cucumis melo OX=3656 GN=LOC103499895 PE=3 SV=1)

HSP 1 Score: 269 bits (688), Expect = 3.30e-85
Identity = 137/190 (72.11%), Postives = 150/190 (78.95%), Query Frame = 0


Query: 1   MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK 60
           M  TILLWAWDK   A FL +TREQ+MIPVSEYVV VSNSS  STKPK+E+ KSED    
Sbjct: 22  MFTTILLWAWDKKSIAGFLSLTREQYMIPVSEYVVGVSNSSPTSTKPKNEVVKSED---- 81

Query: 61  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS 120
              KMKERS NTDEKE+P           +S++YSDA S SKPTP LKE EDGV  S SS
Sbjct: 82  ---KMKERSTNTDEKEKPR----------ESSHYSDADSSSKPTPELKENEDGVILSPSS 141

Query: 121 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 180
           KVCNYAKGRWVED+RRPWYSG  CK+WLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE
Sbjct: 142 KVCNYAKGRWVEDNRRPWYSGFGCKQWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 194

Query: 181 RSSFLKRYRD 190
           RSSFL+R ++
Sbjct: 202 RSSFLRRMQN 194

[Close]

BLAST of Csor.00g004650 vs. ExPASy TrEMBL
Match: A0A6J1DK12 (protein trichome birefringence-like 14 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021241 PE=3 SV=1)

HSP 1 Score: 269 bits (688), Expect = 3.49e-85
Identity = 136/190 (71.58%), Postives = 157/190 (82.63%), Query Frame = 0


Query: 1   MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK 60
           M  +ILLWAWDKSYFAS LP+TRE+FM+PVSEYVVD+SNSSS S++PKDEMAK ED    
Sbjct: 22  MFMSILLWAWDKSYFASLLPLTREKFMMPVSEYVVDLSNSSSTSSEPKDEMAKPED---- 81

Query: 61  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS 120
              KM+ERSNN +EKE        KE+PG+ST++SDA SV K TP LKE ++GVT S S+
Sbjct: 82  ---KMEERSNNINEKE--------KEKPGESTDFSDADSVFKSTPELKENKEGVTLSPST 141

Query: 121 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 180
           KVCNYAKGRWVEDSRRP YSG  CK+WLSIMWACRLTKRKDFSYEGYRWQPENC MPEFE
Sbjct: 142 KVCNYAKGRWVEDSRRPLYSGFGCKRWLSIMWACRLTKRKDFSYEGYRWQPENCEMPEFE 196

Query: 181 RSSFLKRYRD 190
           RS+FL+R ++
Sbjct: 202 RSAFLRRMQN 196

[Close]

BLAST of Csor.00g004650 vs. ExPASy TrEMBL
Match: A0A6J1DHZ1 (protein trichome birefringence-like 14 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021241 PE=3 SV=1)

HSP 1 Score: 258 bits (658), Expect = 1.03e-80
Identity = 133/190 (70.00%), Postives = 154/190 (81.05%), Query Frame = 0


Query: 1   MLATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTKPKDEMAKSEDEIAK 60
           M  +ILLWAWDKSYFAS LP+TRE+FM+PVS   VD+SNSSS S++PKDEMAK ED    
Sbjct: 22  MFMSILLWAWDKSYFASLLPLTREKFMMPVS---VDLSNSSSTSSEPKDEMAKPED---- 81

Query: 61  LEDKMKERSNNTDEKEQPGLLIPKKEQPGKSTNYSDAGSVSKPTPPLKEREDGVTSSSSS 120
              KM+ERSNN +EKE        KE+PG+ST++SDA SV K TP LKE ++GVT S S+
Sbjct: 82  ---KMEERSNNINEKE--------KEKPGESTDFSDADSVFKSTPELKENKEGVTLSPST 141

Query: 121 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 180
           KVCNYAKGRWVEDSRRP YSG  CK+WLSIMWACRLTKRKDFSYEGYRWQPENC MPEFE
Sbjct: 142 KVCNYAKGRWVEDSRRPLYSGFGCKRWLSIMWACRLTKRKDFSYEGYRWQPENCEMPEFE 193

Query: 181 RSSFLKRYRD 190
           RS+FL+R ++
Sbjct: 202 RSAFLRRMQN 193

[Close]

BLAST of Csor.00g004650 vs. TAIR 10
Match: AT5G64020.1 (TRICHOME BIREFRINGENCE-LIKE 14 )

HSP 1 Score: 121.3 bits (303), Expect = 9.5e-28
Identity = 50/82 (60.98%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 109 EREDGVTSSSSSKVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYR 168
           +R+   +SSSSS VCN+AKG+WVED +RP YSG +CK+WLS MW+CR+  R DFS+EGYR
Sbjct: 43  KRQFSSSSSSSSSVCNFAKGKWVEDRKRPLYSGFECKQWLSSMWSCRIMGRPDFSFEGYR 102

Query: 169 WQPENCYMPEFERSSFLKRYRD 191
           WQPE C MP+F+R +FL R ++
Sbjct: 103 WQPEGCNMPQFDRFTFLTRMQN 124

[Close]

BLAST of Csor.00g004650 vs. TAIR 10
Match: AT5G20680.1 (TRICHOME BIREFRINGENCE-LIKE 16 )

HSP 1 Score: 105.9 bits (263), Expect = 4.1e-23
Identity = 73/240 (30.42%), Postives = 112/240 (46.67%), Query Frame = 0


Query: 3   ATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTK---------------- 62
           AT+++W WD++  ++FLP       +   E V  +  + +  TK                
Sbjct: 41  ATVVIWTWDRTPTSAFLPPESHYLKLQSEEKVEKLPTALNTETKDSYSSAIPFVNKEESK 100

Query: 63  ------------------------------PKDEMAKSEDEIAKLEDKMKERSNNTD--- 122
                                         P  E  K E E+   E K ++     D   
Sbjct: 101 EDSSDNKDTEEEEEKQVEEVTVSNTNRGKIPTIEEKKGEHEVIASEPKYRKTPTREDFKL 160

Query: 123 EKEQPGLLIPKKEQPGKSTNYSDAGSVSKPT--PPLKEREDGV-TSSSSSKVCNYAKGRW 182
           EK +  + + + E   ++T+  +  S  K       +ER DG  T+  +++ CNYAKG+W
Sbjct: 161 EKVKHEVAVGEGEAT-ETTHIKETNSDPKSNILATDEERTDGTSTARITNQACNYAKGKW 220

Query: 183 VEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFERSSFLKRYRD 191
           V D+ RP YSG QCK+WL+ MWACRL +R DF++E  RWQP++C M EFE S FL+R ++
Sbjct: 221 VVDNHRPLYSGSQCKQWLASMWACRLMQRTDFAFESLRWQPKDCSMEEFEGSKFLRRMKN 279

[Close]

BLAST of Csor.00g004650 vs. TAIR 10
Match: AT5G20680.2 (TRICHOME BIREFRINGENCE-LIKE 16 )

HSP 1 Score: 105.9 bits (263), Expect = 4.1e-23
Identity = 73/240 (30.42%), Postives = 112/240 (46.67%), Query Frame = 0


Query: 3   ATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTK---------------- 62
           AT+++W WD++  ++FLP       +   E V  +  + +  TK                
Sbjct: 23  ATVVIWTWDRTPTSAFLPPESHYLKLQSEEKVEKLPTALNTETKDSYSSAIPFVNKEESK 82

Query: 63  ------------------------------PKDEMAKSEDEIAKLEDKMKERSNNTD--- 122
                                         P  E  K E E+   E K ++     D   
Sbjct: 83  EDSSDNKDTEEEEEKQVEEVTVSNTNRGKIPTIEEKKGEHEVIASEPKYRKTPTREDFKL 142

Query: 123 EKEQPGLLIPKKEQPGKSTNYSDAGSVSKPT--PPLKEREDGV-TSSSSSKVCNYAKGRW 182
           EK +  + + + E   ++T+  +  S  K       +ER DG  T+  +++ CNYAKG+W
Sbjct: 143 EKVKHEVAVGEGEAT-ETTHIKETNSDPKSNILATDEERTDGTSTARITNQACNYAKGKW 202

Query: 183 VEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFERSSFLKRYRD 191
           V D+ RP YSG QCK+WL+ MWACRL +R DF++E  RWQP++C M EFE S FL+R ++
Sbjct: 203 VVDNHRPLYSGSQCKQWLASMWACRLMQRTDFAFESLRWQPKDCSMEEFEGSKFLRRMKN 261

[Close]

BLAST of Csor.00g004650 vs. TAIR 10
Match: AT5G20680.3 (TRICHOME BIREFRINGENCE-LIKE 16 )

HSP 1 Score: 105.9 bits (263), Expect = 4.1e-23
Identity = 73/240 (30.42%), Postives = 112/240 (46.67%), Query Frame = 0


Query: 3   ATILLWAWDKSYFASFLPVTREQFMIPVSEYVVDVSNSSSISTK---------------- 62
           AT+++W WD++  ++FLP       +   E V  +  + +  TK                
Sbjct: 41  ATVVIWTWDRTPTSAFLPPESHYLKLQSEEKVEKLPTALNTETKDSYSSAIPFVNKEESK 100

Query: 63  ------------------------------PKDEMAKSEDEIAKLEDKMKERSNNTD--- 122
                                         P  E  K E E+   E K ++     D   
Sbjct: 101 EDSSDNKDTEEEEEKQVEEVTVSNTNRGKIPTIEEKKGEHEVIASEPKYRKTPTREDFKL 160

Query: 123 EKEQPGLLIPKKEQPGKSTNYSDAGSVSKPT--PPLKEREDGV-TSSSSSKVCNYAKGRW 182
           EK +  + + + E   ++T+  +  S  K       +ER DG  T+  +++ CNYAKG+W
Sbjct: 161 EKVKHEVAVGEGEAT-ETTHIKETNSDPKSNILATDEERTDGTSTARITNQACNYAKGKW 220

Query: 183 VEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFERSSFLKRYRD 191
           V D+ RP YSG QCK+WL+ MWACRL +R DF++E  RWQP++C M EFE S FL+R ++
Sbjct: 221 VVDNHRPLYSGSQCKQWLASMWACRLMQRTDFAFESLRWQPKDCSMEEFEGSKFLRRMKN 279

[Close]

BLAST of Csor.00g004650 vs. TAIR 10
Match: AT2G37720.1 (TRICHOME BIREFRINGENCE-LIKE 15 )

HSP 1 Score: 105.1 bits (261), Expect = 7.0e-23
Identity = 42/70 (60.00%), Postives = 55/70 (78.57%), Query Frame = 0


Query: 121 KVCNYAKGRWVEDSRRPWYSGLQCKKWLSIMWACRLTKRKDFSYEGYRWQPENCYMPEFE 180
           K CN AKG WVED +RP YSG +CK+WLS +++CR+  R DFS+EGYRWQPE C +PEF 
Sbjct: 141 KTCNLAKGEWVEDKKRPLYSGFECKQWLSNIFSCRVMGRPDFSFEGYRWQPEGCNIPEFN 200

Query: 181 RSSFLKRYRD 191
           R +FL+R ++
Sbjct: 201 RVNFLRRMQN 210

The following BLAST results are available for this feature:

BLAST of Csor.00g004650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WPS0	1.3e-26	60.98	Protein trichome birefringence-like 14 OS=Arabidopsis thaliana OX=3702 GN=TBL14 ...	[more]
F4K5L5	5.8e-22	30.42	Protein trichome birefringence-like 16 OS=Arabidopsis thaliana OX=3702 GN=TBL16 ...	[more]
O80940	9.9e-22	60.00	Protein trichome birefringence-like 15 OS=Arabidopsis thaliana OX=3702 GN=TBL15 ...	[more]
Q67XC4	1.9e-09	38.67	Protein trichome birefringence-like 40 OS=Arabidopsis thaliana OX=3702 GN=TBL40 ...	[more]
O80919	8.1e-08	37.08	Protein trichome birefringence-like 34 OS=Arabidopsis thaliana OX=3702 GN=TBL34 ...	[more]

BLAST of Csor.00g004650 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593326.1	4.30e-157	100.00	Protein trichome birefringence-like 14, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022960283.1	4.17e-127	97.37	protein trichome birefringence-like 14 [Cucurbita moschata]	[more]
XP_023514948.1	1.10e-124	95.79	protein trichome birefringence-like 14 [Cucurbita pepo subsp. pepo]	[more]
XP_023004529.1	1.80e-123	94.74	protein trichome birefringence-like 14 [Cucurbita maxima]	[more]
KAG7025673.1	1.03e-93	80.10	Protein trichome birefringence-like 14 [Cucurbita argyrosperma subsp. argyrosper...	[more]

BLAST of Csor.00g004650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H8E4	2.02e-127	97.37	protein trichome birefringence-like 14 OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1KWI4	8.69e-124	94.74	protein trichome birefringence-like 14 OS=Cucurbita maxima OX=3661 GN=LOC1114978...	[more]
A0A1S3CEB0	3.30e-85	72.11	protein trichome birefringence-like 14 OS=Cucumis melo OX=3656 GN=LOC103499895 P...	[more]
A0A6J1DK12	3.49e-85	71.58	protein trichome birefringence-like 14 isoform X1 OS=Momordica charantia OX=3673...	[more]
A0A6J1DHZ1	1.03e-80	70.00	protein trichome birefringence-like 14 isoform X2 OS=Momordica charantia OX=3673...	[more]

BLAST of Csor.00g004650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64020.1	9.5e-28	60.98	TRICHOME BIREFRINGENCE-LIKE 14	[more]
AT5G20680.1	4.1e-23	30.42	TRICHOME BIREFRINGENCE-LIKE 16	[more]
AT5G20680.2	4.1e-23	30.42	TRICHOME BIREFRINGENCE-LIKE 16	[more]
AT5G20680.3	4.1e-23	30.42	TRICHOME BIREFRINGENCE-LIKE 16	[more]
AT2G37720.1	7.0e-23	60.00	TRICHOME BIREFRINGENCE-LIKE 15	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 51..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..118
None	No IPR available	PANTHER	PTHR13533:SF16	PROTEIN TRICHOME BIREFRINGENCE-LIKE 14-RELATED	coord: 2..191
None	No IPR available	PANTHER	PTHR13533	N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE	coord: 2..191
IPR025846	PMR5 N-terminal domain	PFAM	PF14416	PMR5N	coord: 122..174 e-value: 9.9E-14 score: 51.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g004650.m01	Csor.00g004650.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane