Csor.00g003990 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g003990
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	methyl-CpG-binding domain-containing protein 11-like isoform X4
Location	Csor_Chr08: 3566713 .. 3568738 (-)
RNA-Seq Expression	Csor.00g003990
Synteny	Csor.00g003990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGACGAAGTGGGAGTGCAGAGCAAAGAAGAGCTTCAAAACCCAGTTGAAGGAGGAGCTAAAGATGAAGTTTCTGTTCATCTTCCAGCTCCACCTTCTTGGAAGAAACTGGTTTTTTTTTTTCACTCTCTTTTTTCTTCCGTGTTCTTGTGTTTTTATCTTTTTGATTCTTTTTATATCTTTGTTTTTCTGTTGGATCTGTTTCTGGGTGTCTCTAATTTTTGCTTGATTCTCTGTTTTTGATGTTGGTATTAATCTGTTCTTGGTGAATTGTGGTTGCTGCTGTGTTTTTAGTTCTAGGGTTTGTCAATGTCTTCGCTCTTTGCCTTTGTGATTAGGGTTTTTCCTGATTTGGGAAGTGTTTGCCTTACAAATTGGCTGCTTCTGCTCATAGTTTCTGCCCTTTTGATGCTATTTAGGGCTTGGCTTCAGGAAATTCAGGAAGATTTAGAGATATTTAGGGAAGAAAAACAGGGCTTTCTCTTTCAAAAGTTAATCAATTCTATAAGAATCAGGTTGTAGGATGTGTGCCTTACAGATTCACAAATCTGTAATCACATTCTGCTAACCTTAGAAACAGAGGAGCTCCAGTACAAGCTAATGAGCTATCTCAACAGGAAAAGCCCACATTCGAAGCGAATCACCCCTAATACGACTCGCTTCAGGCGCATGTCTCGGTTCTTGAAGTCCTAATTGGGGTCGAGAAAAAGAGAGATTAGGGGTGAGAGTGGGGAGAGATTTCTACCCGTTAGCTAAACAGGGCTAGGGATGGAAATTCCCGTTTCCTCGTCCCTGCCCTGTCCCTTGGACATCTATGTATATATATGTATGTATGGCTTCCCTAACCCCGCCCGACCCCGTGGACGTATTTTAGTGTGCCCCATGCTTTTACAACACGCACGAGAGGGGGAATTAAAGATTTGTTTTCCTTTTTTAACCTGAAAACTGTGTTCCCTTGACTGAGGATAACGTTTATTACTTGCACCAGCTGGTTCTTGTTGTGAAAAATCATTCTGGGTCTGAATGATTCTATTTTTCCCTTTCATTCTTTGGCTTTGATGATGATAATGATGACAGTTCCTGTTTTATTTCATTCCAGTTATCACCCAAGAAGGGAGTTACACCAAGAAAGAACGAAGTCATATTCATAGCACCTACGGGCGAGGAAATCAGTAATCGAAAACAGCTCGAGCAGTACTTGAAATCACACCCTGTTGATGTTGCATTATCGGATTTTGATTGGAGTACTGGTGAGACACCTCGGAGATCTGCTAGGATTAGTGAGAAGGCTAAGACAACGCCTCCCCCACAGGAAGATCCCCCAAGGAAACGAGCTAGAAAGTCTCCTGGCTCGAAAAAGAAGGAAGCTAAGAACTCCGAGGGTGTAAAGGAAACTGATGTTAAAGACGTTGAAATGTCCGAGAAGGAACACGCTGAAATCGAGAAAGAAAAGGATAAAGAGCCTAAAATGGTTGATGAAACAAAAGAAAAAGAAACTGAAAATGCCAAGGAGGAAGAGCCTGAAAAAGACATTGAAACTGCCAAGGATGAACAGGCCAAGAAGGAAGACGAAACAAAAGACAAGGAAATTGAAACGGCCAAGGATGAACAGGCCGAGAACGTTGTCGAAACAAAAGACGAACCCGGCATTGAGAATGTGCCCGGTAACACGACGATAACCAAAAACGGTCAGTTAGATGCTGAAGATGGCAAAGAAGTAGAAGATCAAAGTCATGGTAATGTTCAAAATCAAGAGGTAGCCACAGCTGTTGAAAGTGTGGCATTGGTGGGTGGACAAGATAAAGGGGAAAACAGACCACAAACTGAAGCTGAGAAAGCTAATGAATCATGCTGTATGAAACAGGAAAAGGCAGATGCTAGTAACATCAAGGAAAATGGTGTTGCAGGAACTCCAGCATCCGAGGGAACGATCACGGAAAACGACGATGCACAAAAGCACGACATCCAGGCAAAGGACAGAGTGAACAAAAAGGAGAGCGAGGTGATCGAAACCGGTAAGTAA

mRNA sequence

ATGGAAGACGAAGTGGGAGTGCAGAGCAAAGAAGAGCTTCAAAACCCAGTTGAAGGAGGAGCTAAAGATGAAGTTTCTGTTCATCTTCCAGCTCCACCTTCTTGGAAGAAACTGTTATCACCCAAGAAGGGAGTTACACCAAGAAAGAACGAAGTCATATTCATAGCACCTACGGGCGAGGAAATCAGTAATCGAAAACAGCTCGAGCAGTACTTGAAATCACACCCTGTTGATGTTGCATTATCGGATTTTGATTGGAGTACTGGTGAGACACCTCGGAGATCTGCTAGGATTAGTGAGAAGGCTAAGACAACGCCTCCCCCACAGGAAGATCCCCCAAGGAAACGAGCTAGAAAGTCTCCTGGCTCGAAAAAGAAGGAAGCTAAGAACTCCGAGGGTGTAAAGGAAACTGATGTTAAAGACGTTGAAATGTCCGAGAAGGAACACGCTGAAATCGAGAAAGAAAAGGATAAAGAGCCTAAAATGGTTGATGAAACAAAAGAAAAAGAAACTGAAAATGCCAAGGAGGAAGAGCCTGAAAAAGACATTGAAACTGCCAAGGATGAACAGGCCAAGAAGGAAGACGAAACAAAAGACAAGGAAATTGAAACGGCCAAGGATGAACAGGCCGAGAACGTTGTCGAAACAAAAGACGAACCCGGCATTGAGAATGTGCCCGGTAACACGACGATAACCAAAAACGGTCAGTTAGATGCTGAAGATGGCAAAGAAGTAGAAGATCAAAGTCATGGTAATGTTCAAAATCAAGAGGTAGCCACAGCTGTTGAAAGTGTGGCATTGGTGGGTGGACAAGATAAAGGGGAAAACAGACCACAAACTGAAGCTGAGAAAGCTAATGAATCATGCTGTATGAAACAGGAAAAGGCAGATGCTAGTAACATCAAGGAAAATGGTGTTGCAGGAACTCCAGCATCCGAGGGAACGATCACGGAAAACGACGATGCACAAAAGCACGACATCCAGGCAAAGGACAGAGTGAACAAAAAGGAGAGCGAGGTGATCGAAACCGGTAAGTAA

Coding sequence (CDS)

ATGGAAGACGAAGTGGGAGTGCAGAGCAAAGAAGAGCTTCAAAACCCAGTTGAAGGAGGAGCTAAAGATGAAGTTTCTGTTCATCTTCCAGCTCCACCTTCTTGGAAGAAACTGTTATCACCCAAGAAGGGAGTTACACCAAGAAAGAACGAAGTCATATTCATAGCACCTACGGGCGAGGAAATCAGTAATCGAAAACAGCTCGAGCAGTACTTGAAATCACACCCTGTTGATGTTGCATTATCGGATTTTGATTGGAGTACTGGTGAGACACCTCGGAGATCTGCTAGGATTAGTGAGAAGGCTAAGACAACGCCTCCCCCACAGGAAGATCCCCCAAGGAAACGAGCTAGAAAGTCTCCTGGCTCGAAAAAGAAGGAAGCTAAGAACTCCGAGGGTGTAAAGGAAACTGATGTTAAAGACGTTGAAATGTCCGAGAAGGAACACGCTGAAATCGAGAAAGAAAAGGATAAAGAGCCTAAAATGGTTGATGAAACAAAAGAAAAAGAAACTGAAAATGCCAAGGAGGAAGAGCCTGAAAAAGACATTGAAACTGCCAAGGATGAACAGGCCAAGAAGGAAGACGAAACAAAAGACAAGGAAATTGAAACGGCCAAGGATGAACAGGCCGAGAACGTTGTCGAAACAAAAGACGAACCCGGCATTGAGAATGTGCCCGGTAACACGACGATAACCAAAAACGGTCAGTTAGATGCTGAAGATGGCAAAGAAGTAGAAGATCAAAGTCATGGTAATGTTCAAAATCAAGAGGTAGCCACAGCTGTTGAAAGTGTGGCATTGGTGGGTGGACAAGATAAAGGGGAAAACAGACCACAAACTGAAGCTGAGAAAGCTAATGAATCATGCTGTATGAAACAGGAAAAGGCAGATGCTAGTAACATCAAGGAAAATGGTGTTGCAGGAACTCCAGCATCCGAGGGAACGATCACGGAAAACGACGATGCACAAAAGCACGACATCCAGGCAAAGGACAGAGTGAACAAAAAGGAGAGCGAGGTGATCGAAACCGGTAAGTAA

Protein sequence

MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGEEISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKSPGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPEKDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAEDGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASNIKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIETGK

Homology

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BLAST of Csor.00g003990 vs. ExPASy Swiss-Prot
Match: Q9LW00 (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.0e-30
Identity = 119/245 (48.57%), Postives = 147/245 (60.00%), Query Frame = 0


Query: 19  GGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGEEISNRKQLEQYLKSHPVD 78
           GG ++ VSV LPAP SWKKL  P K  + +K EV+F+APTGEEISNRKQLEQYLKSHP +
Sbjct: 2   GGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGN 61

Query: 79  VALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRAR-KSPGSKK-KEAKNSEGVKE 138
            A+++FDW+T  TPRRSARISEK K TP P ++PP+KR R KSP SKK  E + SEG  E
Sbjct: 62  PAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGE 121

Query: 139 --TDVKDVEMSEKEH-AEIEKEKDK----EPKMVDETKE----KETENAK--EEEPEKDI 198
             + VKD EM+  E  AE E   DK    E + V++ KE    +ET NA   +EE E   
Sbjct: 122 ENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMK 181

Query: 199 ETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITK----NGQLDA 245
           E A D    K  ET DKE +T   E+    VE K     +    +   T+    NG    
Sbjct: 182 EKALDSVDDKSKET-DKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTE 241

[Close]

BLAST of Csor.00g003990 vs. ExPASy Swiss-Prot
Match: Q9XI36 (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 8.6e-28
Identity = 119/334 (35.63%), Postives = 171/334 (51.20%), Query Frame = 0


Query: 25  VSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGEEISNRKQLEQYLKSHPVDVALSDF 84
           VS+ LPAP SWKKL  PK+  TPRK E++F+APTGEEIS+RKQLEQYLK+HP +  +S+F
Sbjct: 8   VSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISEF 67

Query: 85  DWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKSPGSKKKEAKNSEGVKETDVK---D 144
           +W+TGETPRRS+RIS+K K T P  +  P  + R+S  +KK   + +E  +E  VK   D
Sbjct: 68  EWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSSLTKKDNKEAAEKNEEAAVKENMD 127

Query: 145 VEMSEK-EHAEIEKEKDKEPKMVDETKEKETENAKEEEPEKDIETAKDEQAKKEDET--- 204
           V+   K E+AE EKEK+KE        EKE    ++ E EK  +  +  +A KE +T   
Sbjct: 128 VDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQTEIA 187

Query: 205 ---KDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAEDGKEVEDQSHGNVQ 264
              K+KE E A+ E  E  V    +  +E               AE+  +VE      ++
Sbjct: 188 EAEKEKEGEKAEAENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEEPSKVEGLKDTEMK 247

Query: 265 NQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQE-----KADASNIKENGVAGT 324
             +       V     ++K EN+     E   E      E      A+A   KE+     
Sbjct: 248 EAQEVVTEADVEKKPAEEKTENKGSVTTEANGEQNVTLGEPNLDADAEADKGKESKEYDE 307

Query: 325 PASEGTITENDDAQKHDIQAKDRVNKKESEVIET 344
             +E    + +D Q+ D +  +    KE+E  E+
Sbjct: 308 KTTEAEANKENDTQESDEKKTEAAANKENETQES 341

[Close]

BLAST of Csor.00g003990 vs. NCBI nr
Match: KAG6593390.1 (Methyl-CpG-binding domain-containing protein 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 631 bits (1628), Expect = 3.20e-227
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGE 60
           MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGE
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGE 60

Query: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120
           EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS
Sbjct: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120

Query: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPE 180
           PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPE
Sbjct: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPE 180

Query: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240
           KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE
Sbjct: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240

Query: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300
           DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN
Sbjct: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300

Query: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIETGK 345
           IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIETGK
Sbjct: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIETGK 345

[Close]

BLAST of Csor.00g003990 vs. NCBI nr
Match: XP_022960053.1 (methyl-CpG-binding domain-containing protein 11-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 624 bits (1610), Expect = 1.77e-224
Identity = 341/345 (98.84%), Postives = 343/345 (99.42%), Query Frame = 0


Query: 1   MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGE 60
           MEDEVGVQSKEELQNPVEGGAKDEVS HLPAPPSWKKLLSPKKG TPRKNEVIFIAPTGE
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDEVSAHLPAPPSWKKLLSPKKGGTPRKNEVIFIAPTGE 60

Query: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120
           EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS
Sbjct: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120

Query: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPE 180
           PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEI+KEKDKEPKMVDETKEKETENAK+EEPE
Sbjct: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIKKEKDKEPKMVDETKEKETENAKDEEPE 180

Query: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240
           KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE
Sbjct: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240

Query: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300
           DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN
Sbjct: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300

Query: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIETGK 345
           IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIETGK
Sbjct: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIETGK 345

[Close]

BLAST of Csor.00g003990 vs. NCBI nr
Match: XP_022960054.1 (methyl-CpG-binding domain-containing protein 11-like isoform X5 [Cucurbita moschata])

HSP 1 Score: 620 bits (1600), Expect = 5.92e-223
Identity = 339/343 (98.83%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 1   MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGE 60
           MEDEVGVQSKEELQNPVEGGAKDEVS HLPAPPSWKKLLSPKKG TPRKNEVIFIAPTGE
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDEVSAHLPAPPSWKKLLSPKKGGTPRKNEVIFIAPTGE 60

Query: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120
           EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS
Sbjct: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120

Query: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPE 180
           PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEI+KEKDKEPKMVDETKEKETENAK+EEPE
Sbjct: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIKKEKDKEPKMVDETKEKETENAKDEEPE 180

Query: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240
           KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE
Sbjct: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240

Query: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300
           DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN
Sbjct: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300

Query: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET 343
           IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET
Sbjct: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET 343

[Close]

BLAST of Csor.00g003990 vs. NCBI nr
Match: XP_022960051.1 (methyl-CpG-binding domain-containing protein 11-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 620 bits (1600), Expect = 7.12e-223
Identity = 339/343 (98.83%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 1   MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGE 60
           MEDEVGVQSKEELQNPVEGGAKDEVS HLPAPPSWKKLLSPKKG TPRKNEVIFIAPTGE
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDEVSAHLPAPPSWKKLLSPKKGGTPRKNEVIFIAPTGE 60

Query: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120
           EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS
Sbjct: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120

Query: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPE 180
           PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEI+KEKDKEPKMVDETKEKETENAK+EEPE
Sbjct: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIKKEKDKEPKMVDETKEKETENAKDEEPE 180

Query: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240
           KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE
Sbjct: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240

Query: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300
           DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN
Sbjct: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300

Query: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET 343
           IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET
Sbjct: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET 343

[Close]

BLAST of Csor.00g003990 vs. NCBI nr
Match: XP_022960050.1 (methyl-CpG-binding domain-containing protein 11-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 620 bits (1600), Expect = 1.29e-222
Identity = 339/343 (98.83%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 1   MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGE 60
           MEDEVGVQSKEELQNPVEGGAKDEVS HLPAPPSWKKLLSPKKG TPRKNEVIFIAPTGE
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDEVSAHLPAPPSWKKLLSPKKGGTPRKNEVIFIAPTGE 60

Query: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120
           EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS
Sbjct: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120

Query: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPE 180
           PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEI+KEKDKEPKMVDETKEKETENAK+EEPE
Sbjct: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIKKEKDKEPKMVDETKEKETENAKDEEPE 180

Query: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240
           KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE
Sbjct: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240

Query: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300
           DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN
Sbjct: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300

Query: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET 343
           IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET
Sbjct: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET 343

[Close]

BLAST of Csor.00g003990 vs. ExPASy TrEMBL
Match: A0A6J1H7R0 (methyl-CpG-binding domain-containing protein 11-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111460918 PE=4 SV=1)

HSP 1 Score: 624 bits (1610), Expect = 8.58e-225
Identity = 341/345 (98.84%), Postives = 343/345 (99.42%), Query Frame = 0


Query: 1   MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGE 60
           MEDEVGVQSKEELQNPVEGGAKDEVS HLPAPPSWKKLLSPKKG TPRKNEVIFIAPTGE
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDEVSAHLPAPPSWKKLLSPKKGGTPRKNEVIFIAPTGE 60

Query: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120
           EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS
Sbjct: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120

Query: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPE 180
           PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEI+KEKDKEPKMVDETKEKETENAK+EEPE
Sbjct: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIKKEKDKEPKMVDETKEKETENAKDEEPE 180

Query: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240
           KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE
Sbjct: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240

Query: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300
           DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN
Sbjct: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300

Query: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIETGK 345
           IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIETGK
Sbjct: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIETGK 345

[Close]

BLAST of Csor.00g003990 vs. ExPASy TrEMBL
Match: A0A6J1H9T5 (methyl-CpG-binding domain-containing protein 11-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111460918 PE=4 SV=1)

HSP 1 Score: 620 bits (1600), Expect = 2.86e-223
Identity = 339/343 (98.83%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 1   MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGE 60
           MEDEVGVQSKEELQNPVEGGAKDEVS HLPAPPSWKKLLSPKKG TPRKNEVIFIAPTGE
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDEVSAHLPAPPSWKKLLSPKKGGTPRKNEVIFIAPTGE 60

Query: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120
           EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS
Sbjct: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120

Query: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPE 180
           PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEI+KEKDKEPKMVDETKEKETENAK+EEPE
Sbjct: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIKKEKDKEPKMVDETKEKETENAKDEEPE 180

Query: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240
           KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE
Sbjct: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240

Query: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300
           DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN
Sbjct: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300

Query: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET 343
           IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET
Sbjct: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET 343

[Close]

BLAST of Csor.00g003990 vs. ExPASy TrEMBL
Match: A0A6J1H6K1 (methyl-CpG-binding domain-containing protein 11-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460918 PE=4 SV=1)

HSP 1 Score: 620 bits (1600), Expect = 3.45e-223
Identity = 339/343 (98.83%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 1   MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGE 60
           MEDEVGVQSKEELQNPVEGGAKDEVS HLPAPPSWKKLLSPKKG TPRKNEVIFIAPTGE
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDEVSAHLPAPPSWKKLLSPKKGGTPRKNEVIFIAPTGE 60

Query: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120
           EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS
Sbjct: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120

Query: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPE 180
           PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEI+KEKDKEPKMVDETKEKETENAK+EEPE
Sbjct: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIKKEKDKEPKMVDETKEKETENAKDEEPE 180

Query: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240
           KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE
Sbjct: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240

Query: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300
           DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN
Sbjct: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300

Query: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET 343
           IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET
Sbjct: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET 343

[Close]

BLAST of Csor.00g003990 vs. ExPASy TrEMBL
Match: A0A6J1H804 (methyl-CpG-binding domain-containing protein 11-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460918 PE=4 SV=1)

HSP 1 Score: 620 bits (1600), Expect = 6.24e-223
Identity = 339/343 (98.83%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 1   MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGE 60
           MEDEVGVQSKEELQNPVEGGAKDEVS HLPAPPSWKKLLSPKKG TPRKNEVIFIAPTGE
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDEVSAHLPAPPSWKKLLSPKKGGTPRKNEVIFIAPTGE 60

Query: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120
           EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS
Sbjct: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120

Query: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPE 180
           PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEI+KEKDKEPKMVDETKEKETENAK+EEPE
Sbjct: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIKKEKDKEPKMVDETKEKETENAKDEEPE 180

Query: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240
           KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE
Sbjct: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240

Query: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300
           DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN
Sbjct: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300

Query: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET 343
           IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET
Sbjct: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIET 343

[Close]

BLAST of Csor.00g003990 vs. ExPASy TrEMBL
Match: A0A6J1KVX9 (methyl-CpG-binding domain-containing protein 11-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111497674 PE=4 SV=1)

HSP 1 Score: 593 bits (1529), Expect = 1.68e-212
Identity = 331/345 (95.94%), Postives = 335/345 (97.10%), Query Frame = 0


Query: 1   MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGE 60
           MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKG TPRKNEVIFIAPTGE
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDEVSVHLPAPPSWKKLLSPKKGGTPRKNEVIFIAPTGE 60

Query: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120
           EISNRKQLEQYLKSH VDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS
Sbjct: 61  EISNRKQLEQYLKSHSVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120

Query: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPE 180
           PGSKKKEAKNSEGVKETDVKDVEMSEKEH EIEKEKDKEPKMVDETKEKET N K+EEPE
Sbjct: 121 PGSKKKEAKNSEGVKETDVKDVEMSEKEHTEIEKEKDKEPKMVDETKEKETGNGKDEEPE 180

Query: 181 KDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAE 240
           KDIETAKDE+AKKEDETKDKEIETAKDEQA+NVV+TKDEPGIENVPGNTTITKNGQLDAE
Sbjct: 181 KDIETAKDEEAKKEDETKDKEIETAKDEQAKNVVKTKDEPGIENVPGNTTITKNGQLDAE 240

Query: 241 DGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300
           DGKEVEDQS  NVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN
Sbjct: 241 DGKEVEDQS--NVQNQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQEKADASN 300

Query: 301 IKENGVAGTPASEGTITENDDAQKHDIQAKDRVNKKESEVIETGK 345
           IKENGVAGTPASEGTI END AQKHDIQAKDRVNK ESEVIETGK
Sbjct: 301 IKENGVAGTPASEGTIMEND-AQKHDIQAKDRVNKNESEVIETGK 342

[Close]

BLAST of Csor.00g003990 vs. TAIR 10
Match: AT3G15790.1 (methyl-CPG-binding domain 11 )

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-31
Identity = 119/245 (48.57%), Postives = 147/245 (60.00%), Query Frame = 0


Query: 19  GGAKDEVSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGEEISNRKQLEQYLKSHPVD 78
           GG ++ VSV LPAP SWKKL  P K  + +K EV+F+APTGEEISNRKQLEQYLKSHP +
Sbjct: 2   GGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGN 61

Query: 79  VALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRAR-KSPGSKK-KEAKNSEGVKE 138
            A+++FDW+T  TPRRSARISEK K TP P ++PP+KR R KSP SKK  E + SEG  E
Sbjct: 62  PAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGE 121

Query: 139 --TDVKDVEMSEKEH-AEIEKEKDK----EPKMVDETKE----KETENAK--EEEPEKDI 198
             + VKD EM+  E  AE E   DK    E + V++ KE    +ET NA   +EE E   
Sbjct: 122 ENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMK 181

Query: 199 ETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITK----NGQLDA 245
           E A D    K  ET DKE +T   E+    VE K     +    +   T+    NG    
Sbjct: 182 EKALDSVDDKSKET-DKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTE 241

[Close]

BLAST of Csor.00g003990 vs. TAIR 10
Match: AT1G15340.1 (methyl-CPG-binding domain 10 )

HSP 1 Score: 125.9 bits (315), Expect = 6.1e-29
Identity = 119/334 (35.63%), Postives = 171/334 (51.20%), Query Frame = 0


Query: 25  VSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGEEISNRKQLEQYLKSHPVDVALSDF 84
           VS+ LPAP SWKKL  PK+  TPRK E++F+APTGEEIS+RKQLEQYLK+HP +  +S+F
Sbjct: 8   VSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISEF 67

Query: 85  DWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKSPGSKKKEAKNSEGVKETDVK---D 144
           +W+TGETPRRS+RIS+K K T P  +  P  + R+S  +KK   + +E  +E  VK   D
Sbjct: 68  EWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSSLTKKDNKEAAEKNEEAAVKENMD 127

Query: 145 VEMSEK-EHAEIEKEKDKEPKMVDETKEKETENAKEEEPEKDIETAKDEQAKKEDET--- 204
           V+   K E+AE EKEK+KE        EKE    ++ E EK  +  +  +A KE +T   
Sbjct: 128 VDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQTEIA 187

Query: 205 ---KDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAEDGKEVEDQSHGNVQ 264
              K+KE E A+ E  E  V    +  +E               AE+  +VE      ++
Sbjct: 188 EAEKEKEGEKAEAENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEEPSKVEGLKDTEMK 247

Query: 265 NQEVATAVESVALVGGQDKGENRPQTEAEKANESCCMKQE-----KADASNIKENGVAGT 324
             +       V     ++K EN+     E   E      E      A+A   KE+     
Sbjct: 248 EAQEVVTEADVEKKPAEEKTENKGSVTTEANGEQNVTLGEPNLDADAEADKGKESKEYDE 307

Query: 325 PASEGTITENDDAQKHDIQAKDRVNKKESEVIET 344
             +E    + +D Q+ D +  +    KE+E  E+
Sbjct: 308 KTTEAEANKENDTQESDEKKTEAAANKENETQES 341

[Close]

BLAST of Csor.00g003990 vs. TAIR 10
Match: AT1G15340.2 (methyl-CPG-binding domain 10 )

HSP 1 Score: 70.1 bits (170), Expect = 4.0e-12
Identity = 103/333 (30.93%), Postives = 152/333 (45.65%), Query Frame = 0


Query: 25  VSVHLPAPPSWKKLLSPKKGVTPRKNEVIFIAPTGEEISNRKQLEQYLKSHP------VD 84
           VS+ LPAP SWKKL  PK+  TPRK E++F+APTGEEIS+RKQLEQYLK +        +
Sbjct: 8   VSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKDNKEAAEKNEE 67

Query: 85  VALS---DFDWSTGETPRRSA-RISEKAKTTPPPQEDPPRKRARKSPGSK-KKEAKNSEG 144
            A+    D D   G+T    A +  EK   T   + +       K+   K  KE + +E 
Sbjct: 68  AAVKENMDVD-KDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEA 127

Query: 145 VKETDVKDVEMSEKEHAEIEKEKDKEPKMVDETKEKETENAKEEEPEKDIETAKDEQAKK 204
            KE         + E AE EKEK+ E K   E KE E    K+E  E D    + +    
Sbjct: 128 GKE--------GQTEIAEAEKEKEGE-KAEAENKEAEVVRDKKESMEVDTSELEKKAGSG 187

Query: 205 EDETKDKEIETAKDEQAENVVETKDEPGIENVPGNTTITKNGQLDAEDGKEVEDQSHGNV 264
           E   +  ++E  KD + +   E   E  +E  P        G +  E   E       NV
Sbjct: 188 EGAEEPSKVEGLKDTEMKEAQEVVTEADVEKKPAEEKTENKGSVTTEANGE------QNV 247

Query: 265 QNQEVATAVESVALVGGQDKGENRPQTEAE--KANESCCMKQEKADASNIKENGV--AGT 324
              E     ++ A  G + K  +   TEAE  K N++    ++K +A+  KEN    +  
Sbjct: 248 TLGEPNLDADAEADKGKESKEYDEKTTEAEANKENDTQESDEKKTEAAANKENETQESDV 307

Query: 325 PASEGTITENDDAQKHDIQAKDRVNKKESEVIE 343
             +E  + E    + +D++A+D     E+  ++
Sbjct: 308 KKTEAAVAEE---KSNDMKAEDTNRSLEANQVQ 321

The following BLAST results are available for this feature:

BLAST of Csor.00g003990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW00	7.0e-30	48.57	Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9XI36	8.6e-28	35.63	Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Csor.00g003990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593390.1	3.20e-227	100.00	Methyl-CpG-binding domain-containing protein 11, partial [Cucurbita argyrosperma...	[more]
XP_022960053.1	1.77e-224	98.84	methyl-CpG-binding domain-containing protein 11-like isoform X4 [Cucurbita mosch...	[more]
XP_022960054.1	5.92e-223	98.83	methyl-CpG-binding domain-containing protein 11-like isoform X5 [Cucurbita mosch...	[more]
XP_022960051.1	7.12e-223	98.83	methyl-CpG-binding domain-containing protein 11-like isoform X2 [Cucurbita mosch...	[more]
XP_022960050.1	1.29e-222	98.83	methyl-CpG-binding domain-containing protein 11-like isoform X1 [Cucurbita mosch...	[more]

BLAST of Csor.00g003990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7R0	8.58e-225	98.84	methyl-CpG-binding domain-containing protein 11-like isoform X4 OS=Cucurbita mos...	[more]
A0A6J1H9T5	2.86e-223	98.83	methyl-CpG-binding domain-containing protein 11-like isoform X5 OS=Cucurbita mos...	[more]
A0A6J1H6K1	3.45e-223	98.83	methyl-CpG-binding domain-containing protein 11-like isoform X2 OS=Cucurbita mos...	[more]
A0A6J1H804	6.24e-223	98.83	methyl-CpG-binding domain-containing protein 11-like isoform X1 OS=Cucurbita mos...	[more]
A0A6J1KVX9	1.68e-212	95.94	methyl-CpG-binding domain-containing protein 11-like isoform X4 OS=Cucurbita max...	[more]

BLAST of Csor.00g003990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15790.1	5.0e-31	48.57	methyl-CPG-binding domain 11	[more]
AT1G15340.1	6.1e-29	35.63	methyl-CPG-binding domain 10	[more]
AT1G15340.2	4.0e-12	30.93	methyl-CPG-binding domain 10	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 183..203
None	No IPR available	GENE3D	3.30.890.10		coord: 23..96 e-value: 1.1E-8 score: 36.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..256
None	No IPR available	PANTHER	PTHR33729:SF6	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE	coord: 21..344
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 25..91 e-value: 2.5E-11 score: 43.1
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 21..91 score: 13.408326
IPR039622	Methyl-CpG-binding domain-containing protein 10/11	PANTHER	PTHR33729	METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 21..344
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 22..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g003990.m01	Csor.00g003990.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding