Csor.00g003580 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g003580
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Membrane-anchored ubiquitin-fold protein
Location	Csor_Chr11: 78432 .. 81220 (+)
RNA-Seq Expression	Csor.00g003580
Synteny	Csor.00g003580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGAGGACGATTTGATTGACATTAAGTTCAGGCTCTACGATGGTTCTGATATTGGACCATTTCGATACTCGTCCGCATCGACAATAGATGTGCTTAAGCAGAGAATAGTGTCCGATTGGCCCAAAGGTTCCAGCTTAGCTCTTCATCTTCTCCTTATTCTTTTCAATTATAAGTACTCAATTTGTAATCATTTCTCACATTTAGGTTTCTGTATGTCCTTTGAATGCAAACGCTAAGTAGACTTCCGGCTTTCCTAATTGCATGTCTAGAGTCTGTTGATCCTCCTTTTTTTAGTACTATAGGCTGCTAGCTTAAGAAATCTATTTTTAGGACTAATATTTTATTCTTGGCAGACAGCTCTGCGTAGATATTTTATTCTTGATTTACGCGCTCGTTCAGAGGACGCATGTTCAATTCTTTGATGTGTGTCGTTTACCATTAGGAACTCATGCCTGTGTTTGAGGTTTCTCTGAAGAAGTGTCTTTCTTTCACTGGGCTTCTGATCTTCTTCTTTTTTCCTCTGCATTTGTTTTCATATTGATTCTCCTTTTCCCTTTTGGGACGATTTTTCTTTACCTTTTAGGCAAAACAATCACTCCAAAGGCAGCAAGTGAAGTAAAACTGATAAGTTCTGGAAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACTGGAGGAGTTACTATAATGCACGTTGTTGTACAGCCATCCCTAGCAAAAGCTAAAACAGGTGATTACATTTGAGATTTTAGCTATAAATATAAATTTCTTGTTCATAGATTGTTCCTTTTAAAATTTTACAGTAATACGGTATATTTTCCATTTTGTCCTATACCCGATGGTTTTTCAAATACTCTGGATGTAGTTCGACAAGTCTATATAAATGAGGTCTTAGGAGTTGGAACCGTATTCTGAACTGATACAGTTATCCATTTGTTGGTCTTTTTTGGCTTGAACTTGGGTCAATACTCTTCTGATGCTAATCACTAACAACTGTTTTTGTTGCTCTTTCTGAAGTTAATGAGATATAACAATTTCAAAATCATTCTTAGAGCATTCAATCAGCTTTGACTAGTGCTTTTGAGTTAGAAGTTTGACTTTGCTAACTAGAATACCGAATCTTAGCAAGTGGTCCCATGAGTTAGCTATCATGAGCCTTTCAGAGAACCTTCTTTCTTCATTTATTCTGCCGCAGATGTTATCCCTTTTTTCTAAGCTTGTCCTGAACTACTGCCTGTGGCTTTTAAATGAAGAAGTGTTTTTGAGTGCTTTCTTTGAATGGTTAAGACAATAACTGTTTCAGGTTGTAGCCAAACCATTTCATTTAACCCAAAGTCATAGGATCATCTCATTGACTATTACTCCTCTACAAAGTATGCAGCGAAAAGTGAAAGTAGTCCATGGGTTGACCTAGTGGTTAAGAAGGCCAAATGAGAAGAGTTGAAGTGTGTGTATGGTCCTCAAATTTTGTGTCCATTTGGTTCATAAACTTTTAAAATTACAAATTTTAATTTATACCTATTAGATCAATTAGTTTTAAAAATTTTCAAATTTTTTGGTGACCTAAACACAAAGTTGAAAATTTCAAGACTTATTAGATATTTTTGAAAGCTGAAGGACCAAATAAACACAAGTTGAGAGACTAAACTTGTTATTTAAGATAGATATTTTCTAAGGGCTTAGGCTGGTTTATTATTCGGATCTACTAGTAATGATAAAAATTCTTGTCAGCTTTGCAGATTTAACTAAAGATTCAAAATATCCACTCCTACCCATTCTTATTTTTTTCCTGATTTGGCCCTTTTCTCTACTCTTGCTTCTTCTCTCTTCAATATTTTTTCCTTTTTATCTTTTTTCTTCTTTTCATATTCTTTTATCATTGGAAAAACTAGAATAAACTAGAGAAGAAAGAACTTGGATTGTTGTGAGGGCCGAGGAAAATCAAAAAAATCTTCCAGATTTATTTATTTTATTTTGTTAAGTTTACAGTTAATTAACTGTTGATTACTATTAAAATCTGTTATATTATTTTTATTATACAATATAGAAATTATGTATTAACTAGCCTTATGTAATTGACTTGCTCTAATTTCCATATTGCAAAGATTTAATTTTGATTAATACATTAACTAATATCTCACGATTACATATGCTTACTTCTGATTCTATAAGAACCTCTCTTATTTCCATGAAACATGACTATAAGTTTCTATAATTGCTTAGAATTTCTGTATGTTTCATCTTCACATATGATTACTTGGGATTCTATGAAAACATCGTTTATTTCCATGAAGGTTGACAAAGTTGTTATGAAAGCTAAAACATACTTCTGATTCCAAAATAAAGAGGGTATAGTCAATCAAATTTAAACTAAGTTTGCCAATGTGGCAGTCTAGGATCTCCTTTGTGGATTTGTTTTCTTCTGTTTGATTATCAATTGTTCTTTCTTGATTCCATTGAATGCATATCCAAACAATATCCACAGCTACGTATGTACCCCTTGACGAGCAAGAAGAATGAAAAATAGAAAGTTACCTGTATAAATAAGTTTATGTGACTGCTATGGGTTTCTAGCCAATTTTTGAAAATGATCATTGTAAAACTAGATTAAATCATGTAATCACTATCCAAATTTGTTTTTCCGATGAGTGTGGTAATTCTTTGCTGTGATATCAAATATTTACTGAGATATGTTGATGATACAGAGAAAAAGACTGACAATTCGCAACAGAAGATCGTGTGCTCCTGTTCCATACTTTGA

mRNA sequence

ATGCCGGAGGACGATTTGATTGACATTAAGTTCAGGCTCTACGATGGTTCTGATATTGGACCATTTCGATACTCGTCCGCATCGACAATAGATGTGCTTAAGCAGAGAATAGTGTCCGATTGGCCCAAAGGCAAAACAATCACTCCAAAGGCAGCAAGTGAAGTAAAACTGATAAGTTCTGGAAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACTGGAGGAGTTACTATAATGCACGTTGTTGTACAGCCATCCCTAGCAAAAGCTAAAACAGAGAAAAAGACTGACAATTCGCAACAGAAGATCGTGTGCTCCTGTTCCATACTTTGA

Coding sequence (CDS)

ATGCCGGAGGACGATTTGATTGACATTAAGTTCAGGCTCTACGATGGTTCTGATATTGGACCATTTCGATACTCGTCCGCATCGACAATAGATGTGCTTAAGCAGAGAATAGTGTCCGATTGGCCCAAAGGCAAAACAATCACTCCAAAGGCAGCAAGTGAAGTAAAACTGATAAGTTCTGGAAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACTGGAGGAGTTACTATAATGCACGTTGTTGTACAGCCATCCCTAGCAAAAGCTAAAACAGAGAAAAAGACTGACAATTCGCAACAGAAGATCGTGTGCTCCTGTTCCATACTTTGA

Protein sequence

MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL

Homology

[Close]

BLAST of Csor.00g003580 vs. ExPASy Swiss-Prot
Match: Q9SW27 (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 7.9e-50
Identity = 89/118 (75.42%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPE++ IDIKFRLYDGSDIGPFRYS+AST+D LKQR+VSDWPKGKT+ PK  +EVKLISS
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCK PFG+  GGV +MHVVVQPSLAK+KTEKK D + + ++C+C+IL
Sbjct: 61  GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKTEKKVDKAPKAVICTCTIL 118

[Close]

BLAST of Csor.00g003580 vs. ExPASy Swiss-Prot
Match: Q9LSD8 (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.2e-36
Identity = 70/120 (58.33%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPE+DL+++KFRLYDGSD+GPF+YS  +T+ +LK+RIVS+WPK K I PK+AS++KLI++
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQ--QKIVCSCSIL 119
           GKILEN KTV QCK PF +    V  MHVVVQ S  KA+ EKK +  +  Q+  CSC+I+
Sbjct: 61  GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKARPEKKIEKEEAPQRSFCSCTIM 120

[Close]

BLAST of Csor.00g003580 vs. ExPASy Swiss-Prot
Match: Q7XRU4 (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB4 PE=2 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 1.5e-32
Identity = 65/116 (56.03%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 4   DDLIDIKFRLYDGSDIGPFRYSS-ASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGK 63
           D+ +++KFRL+DGSDIGP R ++ A+T+  LK R+V+DWPK KTI PK A++VKLIS GK
Sbjct: 20  DEEVEVKFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKDKTIVPKTANDVKLISGGK 79

Query: 64  ILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           ILEN+K + QC+ PFG+       MHVVVQPS AK+K +KKT+   +   CSC+IL
Sbjct: 80  ILENDKNIAQCRAPFGDLPSTAITMHVVVQPSSAKSKPDKKTNKLPKTTRCSCTIL 135

[Close]

BLAST of Csor.00g003580 vs. ExPASy Swiss-Prot
Match: Q8LCS8 (Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MUB2 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.5e-27
Identity = 58/114 (50.88%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 5   DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKIL 64
           D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP+ K   PK   +VKLIS+G+IL
Sbjct: 6   DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRIL 65

Query: 65  ENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLA---KAKTEKKTDNSQQKIVCSC 116
           ENNKTVG C+ P G F+G VT MHV++Q  +    K K + K D  Q K VC C
Sbjct: 66  ENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCLC 119

[Close]

BLAST of Csor.00g003580 vs. ExPASy Swiss-Prot
Match: Q6Z8K4 (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.5e-27
Identity = 53/112 (47.32%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 7   IDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKILEN 66
           I++KFRL+DG+DIGP +Y  ++T+  LK+ I++ WP+ K ITPK  +++KLI++G+ILEN
Sbjct: 8   IEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQDKEITPKTVNDLKLINAGRILEN 67

Query: 67  NKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           N+T+ + ++P GE  GGV  MHVVV+P      +EK+  NS ++  C C+IL
Sbjct: 68  NRTLAESRVPVGEVPGGVITMHVVVRPPQPDKNSEKQLANSPKQNRCGCTIL 119

[Close]

BLAST of Csor.00g003580 vs. NCBI nr
Match: XP_008464397.1 (PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464399.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464400.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464401.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_016903199.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_022932632.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022932642.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022974355.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_022974363.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_023531895.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_023531896.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_038879256.1 membrane-anchored ubiquitin-fold protein 3-like [Benincasa hispida] >KAG6587397.1 Membrane-anchored ubiquitin-fold protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 237 bits (605), Expect = 8.59e-79
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of Csor.00g003580 vs. NCBI nr
Match: XP_031745197.1 (membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >XP_031745199.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >XP_031745202.1 membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >KGN63460.1 hypothetical protein Csa_013839 [Cucumis sativus])

HSP 1 Score: 237 bits (604), Expect = 1.22e-78
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASE+KLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of Csor.00g003580 vs. NCBI nr
Match: XP_022134657.1 (membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134659.1 membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134660.1 membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia])

HSP 1 Score: 233 bits (595), Expect = 2.88e-77
Identity = 115/118 (97.46%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIV DWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVXDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT+KKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKTDKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of Csor.00g003580 vs. NCBI nr
Match: XP_023516373.1 (membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_023516374.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233 bits (593), Expect = 5.82e-77
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDD IDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDFIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118
           GKILENNKTVGQCKLPFGE TGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGESTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of Csor.00g003580 vs. NCBI nr
Match: XP_022988440.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima] >XP_022988441.1 membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima] >XP_022988442.1 membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 231 bits (590), Expect = 1.67e-76
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDD IDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAA+EVKLISS
Sbjct: 1   MPEDDFIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAANEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118
           GKILENNKTVGQCKLPFGE TGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGESTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of Csor.00g003580 vs. ExPASy TrEMBL
Match: A0A6J1IG02 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC111472981 PE=4 SV=1)

HSP 1 Score: 237 bits (605), Expect = 4.16e-79
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of Csor.00g003580 vs. ExPASy TrEMBL
Match: A0A1S3CMX7 (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103502298 PE=4 SV=1)

HSP 1 Score: 237 bits (605), Expect = 4.16e-79
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of Csor.00g003580 vs. ExPASy TrEMBL
Match: A0A6J1EXB1 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111439129 PE=4 SV=1)

HSP 1 Score: 237 bits (605), Expect = 4.16e-79
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of Csor.00g003580 vs. ExPASy TrEMBL
Match: A0A0A0LNH9 (Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_1G001320 PE=4 SV=1)

HSP 1 Score: 237 bits (604), Expect = 5.91e-79
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASE+KLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEIKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of Csor.00g003580 vs. ExPASy TrEMBL
Match: A0A6J1C076 (Membrane-anchored ubiquitin-fold protein OS=Momordica charantia OX=3673 GN=LOC111006877 PE=4 SV=1)

HSP 1 Score: 233 bits (595), Expect = 1.40e-77
Identity = 115/118 (97.46%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIV DWPKGKTITPKAASEVKLISS
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVXDWPKGKTITPKAASEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 118
           GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPS+AKAKT+KKTDNSQQKIVCSCSIL
Sbjct: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSIAKAKTDKKTDNSQQKIVCSCSIL 118

[Close]

BLAST of Csor.00g003580 vs. TAIR 10
Match: AT4G24990.1 (Ubiquitin family protein )

HSP 1 Score: 197.6 bits (501), Expect = 5.6e-51
Identity = 89/118 (75.42%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPE++ IDIKFRLYDGSDIGPFRYS+AST+D LKQR+VSDWPKGKT+ PK  +EVKLISS
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISS 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKTVGQCK PFG+  GGV +MHVVVQPSLAK+KTEKK D + + ++C+C+IL
Sbjct: 61  GKILENNKTVGQCKTPFGDIAGGVIVMHVVVQPSLAKSKTEKKVDKAPKAVICTCTIL 118

[Close]

BLAST of Csor.00g003580 vs. TAIR 10
Match: AT3G26980.1 (membrane-anchored ubiquitin-fold protein 4 precursor )

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-37
Identity = 70/120 (58.33%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           MPE+DL+++KFRLYDGSD+GPF+YS  +T+ +LK+RIVS+WPK K I PK+AS++KLI++
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINA 60

Query: 61  GKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQ--QKIVCSCSIL 119
           GKILEN KTV QCK PF +    V  MHVVVQ S  KA+ EKK +  +  Q+  CSC+I+
Sbjct: 61  GKILENGKTVAQCKAPFDDLPKSVITMHVVVQLSPTKARPEKKIEKEEAPQRSFCSCTIM 120

[Close]

BLAST of Csor.00g003580 vs. TAIR 10
Match: AT5G15460.1 (membrane-anchored ubiquitin-fold protein 2 )

HSP 1 Score: 121.7 bits (304), Expect = 3.9e-28
Identity = 58/114 (50.88%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 5   DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKIL 64
           D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP+ K   PK   +VKLIS+G+IL
Sbjct: 6   DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRIL 65

Query: 65  ENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLA---KAKTEKKTDNSQQKIVCSC 116
           ENNKTVG C+ P G F+G VT MHV++Q  +    K K + K D  Q K VC C
Sbjct: 66  ENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCLC 119

[Close]

BLAST of Csor.00g003580 vs. TAIR 10
Match: AT5G15460.2 (membrane-anchored ubiquitin-fold protein 2 )

HSP 1 Score: 121.7 bits (304), Expect = 3.9e-28
Identity = 58/114 (50.88%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 5   DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISSGKIL 64
           D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP+ K   PK   +VKLIS+G+IL
Sbjct: 6   DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLISAGRIL 65

Query: 65  ENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLA---KAKTEKKTDNSQQKIVCSC 116
           ENNKTVG C+ P G F+G VT MHV++Q  +    K K + K D  Q K VC C
Sbjct: 66  ENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCLC 119

[Close]

BLAST of Csor.00g003580 vs. TAIR 10
Match: AT1G77870.1 (membrane-anchored ubiquitin-fold protein 5 precursor )

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-27
Identity = 59/120 (49.17%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKGKTITPKAASEVKLISS 60
           M ++DLI++KFRL DG+DIGP +YS   T+  LK++I++ WPK K   PK  +EVKLI+ 
Sbjct: 1   MGDEDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLING 60

Query: 61  GKILENNKTVGQCK--LPFGEFTGGVTIMHVVVQPSLAKAKTEKKTDNSQQKIVCSCSIL 119
           GKILENNKT+ + +  +  GE  G VT MHVV++P L + K EK  ++  +K  C C IL
Sbjct: 61  GKILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEKKKEKLQNDPPRKSHCVCCIL 120

The following BLAST results are available for this feature:

BLAST of Csor.00g003580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SW27	7.9e-50	75.42	Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q9LSD8	2.2e-36	58.33	Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q7XRU4	1.5e-32	56.03	Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q8LCS8	5.5e-27	50.88	Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q6Z8K4	5.5e-27	47.32	Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of Csor.00g003580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464397.1	8.59e-79	100.00	PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_0084643...	[more]
XP_031745197.1	1.22e-78	99.15	membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >XP_031745199.1 mem...	[more]
XP_022134657.1	2.88e-77	97.46	membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134...	[more]
XP_023516373.1	5.82e-77	98.31	membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022988440.1	1.67e-76	97.46	membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita maxima] >X...	[more]

BLAST of Csor.00g003580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IG02	4.16e-79	100.00	Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A1S3CMX7	4.16e-79	100.00	Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103502298...	[more]
A0A6J1EXB1	4.16e-79	100.00	Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0LNH9	5.91e-79	99.15	Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_1G001...	[more]
A0A6J1C076	1.40e-77	97.46	Membrane-anchored ubiquitin-fold protein OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Csor.00g003580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24990.1	5.6e-51	75.42	Ubiquitin family protein	[more]
AT3G26980.1	1.6e-37	58.33	membrane-anchored ubiquitin-fold protein 4 precursor	[more]
AT5G15460.1	3.9e-28	50.88	membrane-anchored ubiquitin-fold protein 2	[more]
AT5G15460.2	3.9e-28	50.88	membrane-anchored ubiquitin-fold protein 2	[more]
AT1G77870.1	1.5e-27	49.17	membrane-anchored ubiquitin-fold protein 5 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 1..100 e-value: 2.2E-41 score: 142.0
None	No IPR available	PANTHER	PTHR13169:SF3	MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3	coord: 1..118
None	No IPR available	CDD	cd01814	Ubl_MUBs_plant	coord: 6..93 e-value: 2.71257E-43 score: 134.814
IPR039540	UBL3-like, ubiquitin domain	PFAM	PF13881	Rad60-SLD_2	coord: 6..116 e-value: 3.0E-41 score: 140.0
IPR017000	Membrane-anchored ubiquitin-fold protein	PIRSF	PIRSF032572	MUB	coord: 1..118 e-value: 1.5E-47 score: 158.4
IPR040015	UBL3-like	PANTHER	PTHR13169	UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN	coord: 1..118
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 7..75 score: 10.026781
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 2..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g003580.m01	Csor.00g003580.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005515	protein binding