Csor.00g001380 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAGGGCTACTGTCGAGCTTGATTTCTTCGGCCTCGAGAAGAAGGCCTCCTCCAGGTCTCAGTTCCACAACCTTCTTCACCGCAAGAGAAGCTTTCGAGGTCCTTCCTCCTCTTCCCCTTCTCCCCAATCTCTAATATTATTTCTTACTGTTTCTTTTCATTTGCCTAATTCTCTTTTTCTCTCTTCCCAGGCATTCACAGCGCCATTTCCAAGATCAACCCCGAGCTTCTCAAATCTGTCATTGGATCTGCCTCCATTGCTCTGCCTCCCACTCCCAAGGACGCCAACCACAACCTCCTCTCGCCTTTGCCTCTCTATAACCCTCTCTTCAGGTAATATTACACAAAATCCTATCTACCTCATCGTCTTCGCGGTTCCGTTTCAAATTTCCTCCGAATTCATCGTTTTCGCTCCCCTTTCTGTTTCTCAGGCCCACTTCTGAATCTCTTCAACATACATCTCCGATGACTATCTTCTACAACGGAACCGTCGCCGTTTTTGACGTTCCTCGTGATAAGGTTCGTTCCACCTCTGGATCATCGTCTTACGTGCACGACTTTTACATCAGTTTTTTTCTTTTTCTGTAACTGATTTTGTTTTTGTTGCTTCCCGATTAATTAATCAATCGCTTTCTTCGTTTAGGCCGAGAGCATTCTGAAACTCGTTGCGGAAGGAAAAGCTGAAGCGAATCCTACGGTTGCAATCCCATCCACCGACCGCCAGCAACAGTTGCTTGCATCTCTTGACGGAGGTGATTAAACATCCACCGACTTGTACTGAACCGATATATATATATTTTTTTTATGAAGATATTTATATTTATCAGCATTTCCCTTTACTATTTTCATATTTTGTCTAAAATACATGCTAATTAGTTGCGTTTTTTCAGCAGATCTTCCAATTGCAAGGAAGAAGTCGCTTCAGAGATTCTTGGAGAAGCGCAAGGAGAGGTAATGATCCCTATTCCCTGTAAACTAAATTTGCATAACTAAGAGAAATCCATCACACACTGCTATTATTATTTTCCAATTTATTTATTTATCCGTTCTTTGTTCTTTTTGTACTTGCCTTCAAAATTCTTGCTAAGCTTTTTTCCCTCGGTGTGTAGTCTTATTCTTTGGTAGCTTAGGCCGGTTTATTGAAAACAACGATGGGTGGATACTGTTGATTTGTAATAACTATAAATTGTTTTTCTTAAAAAAATAGGATTATTGTTCTTATATTGATTTCTCTGATTGTATCGCCTATAAAGAATACGAGAGAAGAGAAGCGAACTTTTAGTTGGAAGAGAGTTGAGATAGGGAAATTCCATTTGATAGCTTTTTGAGTGAATGATGGTATAAAACTTGATTGGTTAAGGCCTTTAAGGCCTTCCCTGGTTCATTTTATTACTGTATTTATTATTTCTGACAAACTCATTTTATTGTTGAAATATCCCATTTAATCTCTAGATAGTTCTTCTGGTTTGTTAATTGATTTGACACTGTCAGAAAAAAAAAAAAAAACAAAACAAAACAAAAATAGTTTTCGCCTTTTTTTTTAAAAAAATGAAAATTATTATAAATTTCATCAAGTTTCATAGAAATTAACTTCAAACTATTAGATTGAATTTCAAATTTATTGATAGATCAATAACTAAATTTTAAGTTTTTAAAAGTAGAGAACTAAAGGACCAAAATGATAATAAATTTAATATTGAATTTAAAACCTTTTTTTAAAAATAGAAAATAGTAATTATTTATTTATTTATTTATTATAATAATACTGAAATAATGTGTATGTATTATTGAGAACGGTTGGGATTGGACCCTTGGAAAAAATTGTGGCAAAAGTTAGGGGTCTGTTTGTAAGAAGCTCATTTTTTATTTTTTTATTATTATTTTATTGTTATTAGAAATGCATATACTTATCATGGTTTTGAATTTTGAAACTTCTGTTAGCATATAGAAAACGTTGTGAAGAAAGTAATTTTCTAGAGAATAAATAAAGGGTATTACACAAGTTGAAAGATTTTGTAGGGAAGTGGGTGGACGGACGGTAGAGGAGTTTAGGAGGGTCAGGCAAGAAAGCTTCCCTTTTTGACTTGTGGCATAAAAAAAAAACTAGGATTGGATTCAATTCCATGAAACTTCCTGGATGCTTCTCATTTATTCACATTTTTCTTTTATGCGTTTCTGTTTACTTTTACTTTTTTCGATGGAATAAACAACAACGAAAGAAAAGGGAATGGTTAGGTGTGTATTGTATTTTAAGGAAAGCTTTTATATATTTGATTGTGTTGTGTGTACAGGTTGACTACGGCTTCACCATATGCCTTCCCCTGCCCCCACCTAACCTGA ATGGCTAGGGCTACTGTCGAGCTTGATTTCTTCGGCCTCGAGAAGAAGGCCTCCTCCAGGTCTCAGTTCCACAACCTTCTTCACCGCAAGAGAAGCTTTCGAGGCATTCACAGCGCCATTTCCAAGATCAACCCCGAGCTTCTCAAATCTGTCATTGGATCTGCCTCCATTGCTCTGCCTCCCACTCCCAAGGACGCCAACCACAACCTCCTCTCGCCTTTGCCTCTCTATAACCCTCTCTTCAGGCCCACTTCTGAATCTCTTCAACATACATCTCCGATGACTATCTTCTACAACGGAACCGTCGCCGTTTTTGACGTTCCTCGTGATAAGGCCGAGAGCATTCTGAAACTCGTTGCGGAAGGAAAAGCTGAAGCGAATCCTACGGTTGCAATCCCATCCACCGACCGCCAGCAACAGTTGCTTGCATCTCTTGACGGAGCAGATCTTCCAATTGCAAGGAAGAAGTCGCTTCAGAGATTCTTGGAGAAGCGCAAGGAGAGGTTGACTACGGCTTCACCATATGCCTTCCCCTGCCCCCACCTAACCTGA ATGGCTAGGGCTACTGTCGAGCTTGATTTCTTCGGCCTCGAGAAGAAGGCCTCCTCCAGGTCTCAGTTCCACAACCTTCTTCACCGCAAGAGAAGCTTTCGAGGCATTCACAGCGCCATTTCCAAGATCAACCCCGAGCTTCTCAAATCTGTCATTGGATCTGCCTCCATTGCTCTGCCTCCCACTCCCAAGGACGCCAACCACAACCTCCTCTCGCCTTTGCCTCTCTATAACCCTCTCTTCAGGCCCACTTCTGAATCTCTTCAACATACATCTCCGATGACTATCTTCTACAACGGAACCGTCGCCGTTTTTGACGTTCCTCGTGATAAGGCCGAGAGCATTCTGAAACTCGTTGCGGAAGGAAAAGCTGAAGCGAATCCTACGGTTGCAATCCCATCCACCGACCGCCAGCAACAGTTGCTTGCATCTCTTGACGGAGCAGATCTTCCAATTGCAAGGAAGAAGTCGCTTCAGAGATTCTTGGAGAAGCGCAAGGAGAGGTTGACTACGGCTTCACCATATGCCTTCCCCTGCCCCCACCTAACCTGA MARATVELDFFGLEKKASSRSQFHNLLHRKRSFRGIHSAISKINPELLKSVIGSASIALPPTPKDANHNLLSPLPLYNPLFRPTSESLQHTSPMTIFYNGTVAVFDVPRDKAESILKLVAEGKAEANPTVAIPSTDRQQQLLASLDGADLPIARKKSLQRFLEKRKERLTTASPYAFPCPHLT Homology
BLAST of Csor.00g001380 vs. ExPASy Swiss-Prot
Match: Q93ZM9 (Protein TIFY 9 OS=Arabidopsis thaliana OX=3702 GN=TIFY9 PE=1 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 8.0e-33 Identity = 88/195 (45.13%), Postives = 127/195 (65.13%), Query Frame = 0
BLAST of Csor.00g001380 vs. ExPASy Swiss-Prot
Match: Q7XV97 (Protein TIFY 9 OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY9 PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.9e-18 Identity = 72/184 (39.13%), Postives = 93/184 (50.54%), Query Frame = 0
BLAST of Csor.00g001380 vs. ExPASy Swiss-Prot
Match: A2XSX6 (Protein TIFY 9 OS=Oryza sativa subsp. indica OX=39946 GN=TIFY9 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.5e-18 Identity = 72/184 (39.13%), Postives = 93/184 (50.54%), Query Frame = 0
BLAST of Csor.00g001380 vs. ExPASy Swiss-Prot
Match: Q10QW3 (Protein TIFY 11b OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY11B PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10 Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of Csor.00g001380 vs. ExPASy Swiss-Prot
Match: A2YNP2 (Protein TIFY 10b OS=Oryza sativa subsp. indica OX=39946 GN=TIFY10B PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.2e-09 Identity = 39/106 (36.79%), Postives = 54/106 (50.94%), Query Frame = 0
BLAST of Csor.00g001380 vs. NCBI nr
Match: KAG6576105.1 (Protein TIFY 9, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 359 bits (921), Expect = 7.31e-125 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Csor.00g001380 vs. NCBI nr
Match: XP_022991838.1 (protein TIFY 9-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 357 bits (917), Expect = 2.98e-124 Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Csor.00g001380 vs. NCBI nr
Match: XP_023547597.1 (protein TIFY 9-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 357 bits (916), Expect = 4.23e-124 Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Csor.00g001380 vs. NCBI nr
Match: XP_022953182.1 (protein TIFY 9-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 355 bits (910), Expect = 3.48e-123 Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Csor.00g001380 vs. NCBI nr
Match: XP_022991839.1 (protein TIFY 9-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 351 bits (901), Expect = 7.92e-122 Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Csor.00g001380 vs. ExPASy TrEMBL
Match: A0A6J1JXF0 (protein TIFY 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488365 PE=3 SV=1) HSP 1 Score: 357 bits (917), Expect = 1.44e-124 Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Csor.00g001380 vs. ExPASy TrEMBL
Match: A0A6J1GMJ3 (protein TIFY 9-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455800 PE=3 SV=1) HSP 1 Score: 355 bits (910), Expect = 1.68e-123 Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Csor.00g001380 vs. ExPASy TrEMBL
Match: A0A6J1JVY1 (protein TIFY 9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488365 PE=3 SV=1) HSP 1 Score: 351 bits (901), Expect = 3.83e-122 Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Csor.00g001380 vs. ExPASy TrEMBL
Match: A0A6J1GMQ1 (protein TIFY 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455800 PE=3 SV=1) HSP 1 Score: 348 bits (894), Expect = 4.48e-121 Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Csor.00g001380 vs. ExPASy TrEMBL
Match: A0A0A0K9H7 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091930 PE=3 SV=1) HSP 1 Score: 315 bits (806), Expect = 1.25e-107 Identity = 165/185 (89.19%), Postives = 176/185 (95.14%), Query Frame = 0
BLAST of Csor.00g001380 vs. TAIR 10
Match: AT5G13220.1 (jasmonate-zim-domain protein 10 ) HSP 1 Score: 141.7 bits (356), Expect = 5.7e-34 Identity = 88/195 (45.13%), Postives = 127/195 (65.13%), Query Frame = 0
BLAST of Csor.00g001380 vs. TAIR 10
Match: AT5G13220.2 (jasmonate-zim-domain protein 10 ) HSP 1 Score: 132.5 bits (332), Expect = 3.5e-31 Identity = 84/188 (44.68%), Postives = 122/188 (64.89%), Query Frame = 0
BLAST of Csor.00g001380 vs. TAIR 10
Match: AT5G13220.3 (jasmonate-zim-domain protein 10 ) HSP 1 Score: 132.5 bits (332), Expect = 3.5e-31 Identity = 84/188 (44.68%), Postives = 122/188 (64.89%), Query Frame = 0
BLAST of Csor.00g001380 vs. TAIR 10
Match: AT5G13220.4 (jasmonate-zim-domain protein 10 ) HSP 1 Score: 98.2 bits (243), Expect = 7.2e-21 Identity = 58/138 (42.03%), Postives = 89/138 (64.49%), Query Frame = 0
BLAST of Csor.00g001380 vs. TAIR 10
Match: AT5G20900.1 (jasmonate-zim-domain protein 12 ) HSP 1 Score: 61.6 bits (148), Expect = 7.5e-10 Identity = 41/116 (35.34%), Postives = 60/116 (51.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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