Csor.00g001100 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g001100
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Squamosa promoter-binding-like protein 16
Location	Csor_Chr17: 10816592 .. 10820771 (+)
RNA-Seq Expression	Csor.00g001100
Synteny	Csor.00g001100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTCAATCTCGACCTTAAGTAAGAGTAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAGAGAATCGGAGGAAGTGAGATTTGACAAATGAAGAGTGAGGGAGAGAACAGTGTGCATTAAGTTTGGTACAGTAAAGGGATGCGGTGTTTGTGGAATGGCATATTATGTGCGTAATCATGAAGCATAGCGTTTATAATTGACCCAAAATGTTTGGGAATGCCATTTGTTTGTAGAAAGCACCTCACAAATACTTATCCATTAAAGAGAAAAAAGAACATTTAATGAAAAAAGTTTGTAAAGTCATCCTTTTTCATAAACCGGGTGAAGCTTAGGAGTGGTGGGATCCACCATCCCTTTTGGTTTCTTCTCCCCCATTCATTCATTCATTCACCCTCTTTATCAAATTATGGCCTTTTAAGTTTCCCTCTTTGTATTAACTTGTTATGATGACAGCTTCAAAAGTTGTTCATACTTTTTTTAGTAACTTGATAACTATTTTTACTTCCTTTTTACGTTATCTTTCTTTTTTCTTTTTAATGTTTGCAAAGTTCCACCACATCTTCTTTTTTTCTTACACGAAAAATATTTTTTTTATAATAATAATAATAAAAAAAAATCTCTACTAAAGATTATATTAAAGATTTTTAAACTATAGTATATTAAAATGGTATATGATAATAATGATAAAATAAAAGGGCGGTAGGGAAATTTGGAAGTTCAGATTATAAGAAACAATTTGGTGTCCACATTTTTTCTTTTTTCTCATATACACAATAAAAACGTGTGGTTAAGCTTTTGTGTCCATTTTGCAATTAGGGCTACCAACCATTATTTATTTATTTATTTATTATTATTTTTTAAAATCCAGTTGTATCAATTCCTCAATCTCAACAACAAATATCTACCAGAGTTAAGAAGCAGAGAGAGGTAGGTTTGTCTTAAATCATATATATAATGCCAACATAAGCCATGAAAGTCATCTCAAAAAATAAAATATAAATAATTAATTGAAGGAATGAAAAAAAATAATGTTATAAAAATTGATTGAATAGATGGGAAGAAAGAAGTCACATGGGTCCCTCCCTTTTCCAAATCCCACCATTCCATTCGGTCGCTCTCTCTCTCCCATCATTCCTCCTCCTAAGCCTCAGCTCCTAAAACCGAACACACTCTGTCCCTTTCTTTGCCACTCGTTTCTGTGTGTTTCTTTTTTTTTCTATTATTTTCTTCTTTTCTCAAACATTTTTTCCTTCTCTCCCACCACGATGCCTTGGAGTTGGGCCTGAAGAGGAAAGCTGAAGGCTTCCAAAATTCCCATTTCCCATTTCCCATTTCCCCACTATCCCTTTCTTCTCCTTTCCCTTTATCATCCATCATCCAAGTACATTATCCACTCTTCCCAATTTTGCATTCCAATTTATCTTCTTTTTTTCTTTTTTCTTTTTCTTTTTTTTTATATTCATTTTCTTCCCCTTTGCTTCTTTTCTACCATTCTTCTAACACCTTCTACAGATTCAGCCTCCCTGCCCATGTCGATATCCGTTTTTCTTTTGGTCTTAGCCGCCATTTCTCATTCTTCACTTCCTTCATCTCATCCTATTTGCTCTCCTCTTTAAGCTTTCTCGGATTCCCCAGATGAAGATGCAGCTTGACTTGTGAATTTCTACCAGGTACCCATCATTTTAAACTTCCAATCCGTTCCTATTTTTTGTTTGCTTTTATACGAAAATTCAATTTACGGGTATTGCAACCTTCACTTGTGGAGACCAGAAATTGAGATTACTTTATCATTTCATGGGGTGAAAAAAGTGATGATGCTGCAGAACTGGGTTTCAGTTGTTTGTCAGGTAGACACTTATATGTTTGCTGTAGTGGACGATTTTGATCTTGATGACAGTGAGCTACTTTTTCCGAAATTTGACAATAGATCTTAAAGGAAAGTGAATGAAGTGGATATTTCCTGTAGATGGCCAATATTCCTCGTCTTTTGGAACTTACAATTTTATCTAGTTCAGGAAACTTTGGGAGTGCTGATTGTATTACTTGTGTGCAGTGATTTTGAAGGGAAGTACTATAACGCTTTGCTTGTTTGTATTGTATTTGCTTATGCCTTAAATTGCATCTTCTTATCCCTGCTGAACTCGTTCTGTTCATCGTTCCTGGTCTGGTTCCTTTCTATTCTGATCTAATCTTATTAGCAGTGCTCTGAAGAGTGTATACCTGAACTGGGAAGGATCCTGATCTGAGAAATTTTCTGTTGGAAGTAAGTTAAAAGCACCTTGAGAATCAGTCTTGTCTGCATTTTTTTTTTTTTTTATAAAAAAACGTTCTGCGAATCGCTACCATAGAAGGAAACTGAGAGTGTGTTGGAGTAGAGGAAGTTGCTTGATGTATTTGAGACTCAGGGGCATTGGTAATATGGGCGATGGTTCTATGGATGACATGAAAGGAACTAGAGTTTCTTTGATCGAGTCATCGGCTTCGAGATTAATGAAGAGGTCACGTGCCCCTGGAAGCGGTCCCCAAGTCCCTTCCTGTATGGTTGATGGTTGTAGCTCAGACCTTAGCAAATGCAGGGACTATCATCGCCGCCATAAAGTATGTGAGCTCCATTCTAAAACACCAAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGTCAGCAGTGTAGCAGGTGAGTTTAAATGTTTAGTTCATTAATTCTGCCTTGGGTTAATTTTCATGATTTTCTTGTCGGATTGAAATAATTTGAGTTAGGCATATAGGATATCTTAAACTTGTTGCTTTTCATCTTGTACTTGGAAACTTATCCATATTTTTCATGGATATGATATACTTGGAAACATTCCCTCATGGATATATTTTAAAATGTGCTAATGTTTTTGCCTTTTACCAGATGGTTGAATCAGTGTTGGATGCAAATATTTGTGAGATACTTGCATTTTGTGTTTCTTTTACTTCTTATCTTTGTATGGTTGGTTCCCTTCTTGGCATTCGTTTCAGTTCCCTTAACATGTGCTTGTAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAGCGTCTCGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACTATGACACTAAATGCAGGAAGATTTCTGTATGGCAACCAAGGTTTGTATTATTAGTTTAGGCTTGGTTTCCCTGGTCCGATCCAATTGAATTCTCTTCCATGCTTCCAAGAATTCCACGACTGTTCCCAATGTTTACATTGTTGTTTCGTTGTCGAATGATGAACCAGTGCGAAGTACATACGACTTGTTTGTGCAGGTCCAAGATTCTTACCATTTGGTAATCAATTACTGTCTGCCAGCAATGATGTGAGCTCTTCTTGGATTGGAATGATCAAACCCGAGAGCAATGCCCCTCTTTGCAGCGGCAACTCACAGTTTGACTTTGGTGACAGAAGAAAAAGTATGTTGCCTGGATCGTTGGCTTGTGATTACAAAGAAAAACAATTAGCAATCTCTTGCATCCCTATAGGATTGCTTCCCAAATCATCCGATGCTCGCCCATTTCTCGACGTTGAATCCAGCAACGGAGAGAATGTTCAGAAAGTGCTCGGAAATGGATCAGATCAGTTCTTCAACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCCGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCACCCCAGCCCATTTCATCCACAGTGACGGTCTTGGCTTGGAGAGTGACCCTGTTAATTCTGGTTTGGTCTCGGACGGTAGCAGCCATGCCAACAGCCGGTGCTACCCGACATTCCAGGATGGTCTTGCTGGATCATCTGTAGATTTATTCAGGTATTGAAACATGAAAGTTGGGTCATTCTTGTAGGTTCTGAGATAGATTTATGTAATATGCCTATTCTCTTCAGGATTTAACTCAGCCACCGTTAACCTTCCAATATCTGCTTGCTTCTTATGTTCTGTGAGTTTTAAGGAATGCTGTTGTGTTGTGTGTGAAATGTCTGTTTGGATGTTTTTACTTTGTTCAGACTTGAGATTTCGAATATTAATTTTGTGCCTCTCTTGAGTTCCTCTTCTCTTGGAATAGTCAAAATAGTTGATTTTGGTTATGGATCATATGATGTTGACTAG

mRNA sequence

ATGGTTTTCAATCTCGACCTTAACTTGACTTGTGAATTTCTACCAGAAATTGAGATTACTTTATCATTTCATGGGGTGAAAAAAGTGATGATGCTGCAGAACTGGGTTTCAGTTGTTTGTCAGGTAGACACTTATATGTTTGCTGTAGTGGACGATTTTGATCTTGATGACAAAATTTTCTGTTGGAAGGGCATTGGTAATATGGGCGATGGTTCTATGGATGACATGAAAGGAACTAGAGTTTCTTTGATCGAGTCATCGGCTTCGAGATTAATGAAGAGGTCACGTGCCCCTGGAAGCGGTCCCCAAGTCCCTTCCTGTATGGTTGATGGTTGTAGCTCAGACCTTAGCAAATGCAGGGACTATCATCGCCGCCATAAAGTATGTGAGCTCCATTCTAAAACACCAAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGTCAGCAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAGCGTCTCGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACTATGACACTAAATGCAGGAAGATTTCTGTATGGCAACCAAGGTCCAAGATTCTTACCATTTGGTAATCAATTACTGTCTGCCAGCAATGATGTGAGCTCTTCTTGGATTGGAATGATCAAACCCGAGAGCAATGCCCCTCTTTGCAGCGGCAACTCACAGTTTGACTTTGGTGACAGAAGAAAAAGTATGTTGCCTGGATCGTTGGCTTGTGATTACAAAGAAAAACAATTAGCAATCTCTTGCATCCCTATAGGATTGCTTCCCAAATCATCCGATGCTCGCCCATTTCTCGACGTTGAATCCAGCAACGGAGAGAATGTTCAGAAAGTGCTCGGAAATGGATCAGATCAGTTCTTCAACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCCGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCACCCCAGCCCATTTCATCCACAGTGACGGTCTTGGCTTGGAGAGTGACCCTGTTAATTCTGGTTTGGTCTCGGACGGTAGCAGCCATGCCAACAGCCGGTGCTACCCGACATTCCAGGATGGTCTTGCTGGATCATCTGTAGATTTATTCAGACTTGAGATTTCGAATATTAATTTTGTGCCTCTCTTGAGTTCCTCTTCTCTTGGAATAGTCAAAATAGTTGATTTTGGTTATGGATCATATGATGTTGACTAG

Coding sequence (CDS)

ATGGTTTTCAATCTCGACCTTAACTTGACTTGTGAATTTCTACCAGAAATTGAGATTACTTTATCATTTCATGGGGTGAAAAAAGTGATGATGCTGCAGAACTGGGTTTCAGTTGTTTGTCAGGTAGACACTTATATGTTTGCTGTAGTGGACGATTTTGATCTTGATGACAAAATTTTCTGTTGGAAGGGCATTGGTAATATGGGCGATGGTTCTATGGATGACATGAAAGGAACTAGAGTTTCTTTGATCGAGTCATCGGCTTCGAGATTAATGAAGAGGTCACGTGCCCCTGGAAGCGGTCCCCAAGTCCCTTCCTGTATGGTTGATGGTTGTAGCTCAGACCTTAGCAAATGCAGGGACTATCATCGCCGCCATAAAGTATGTGAGCTCCATTCTAAAACACCAAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGTCAGCAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAGCGTCTCGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACTATGACACTAAATGCAGGAAGATTTCTGTATGGCAACCAAGGTCCAAGATTCTTACCATTTGGTAATCAATTACTGTCTGCCAGCAATGATGTGAGCTCTTCTTGGATTGGAATGATCAAACCCGAGAGCAATGCCCCTCTTTGCAGCGGCAACTCACAGTTTGACTTTGGTGACAGAAGAAAAAGTATGTTGCCTGGATCGTTGGCTTGTGATTACAAAGAAAAACAATTAGCAATCTCTTGCATCCCTATAGGATTGCTTCCCAAATCATCCGATGCTCGCCCATTTCTCGACGTTGAATCCAGCAACGGAGAGAATGTTCAGAAAGTGCTCGGAAATGGATCAGATCAGTTCTTCAACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCCGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCACCCCAGCCCATTTCATCCACAGTGACGGTCTTGGCTTGGAGAGTGACCCTGTTAATTCTGGTTTGGTCTCGGACGGTAGCAGCCATGCCAACAGCCGGTGCTACCCGACATTCCAGGATGGTCTTGCTGGATCATCTGTAGATTTATTCAGACTTGAGATTTCGAATATTAATTTTGTGCCTCTCTTGAGTTCCTCTTCTCTTGGAATAGTCAAAATAGTTGATTTTGGTTATGGATCATATGATGTTGACTAG

Protein sequence

MVFNLDLNLTCEFLPEIEITLSFHGVKKVMMLQNWVSVVCQVDTYMFAVVDDFDLDDKIFCWKGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSHANSRCYPTFQDGLAGSSVDLFRLEISNINFVPLLSSSSLGIVKIVDFGYGSYDVD

Homology

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BLAST of Csor.00g001100 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-44
Identity = 120/281 (42.70%), Postives = 137/281 (48.75%), Query Frame = 0


Query: 66  GNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRR 125
           G    G       T  +   SSA     R  A     Q PSC VDGC  DLSKCRDYHRR
Sbjct: 77  GEPAKGKGPAAAATGAAAAASSAPAKRPRGAAAAGQQQCPSCAVDGCKEDLSKCRDYHRR 136

Query: 126 HKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPAT 185
           HKVCE HSKTP V + G+E RFCQQCSRFH L EFD+ KRSCRKRLDGHNRRRRKPQP  
Sbjct: 137 HKVCEAHSKTPLVVVSGREMRFCQQCSRFHLLQEFDEAKRSCRKRLDGHNRRRRKPQPDP 196

Query: 186 MTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESN-------APLCSGNSQ 245
           M  N+  +L   QG RF PF      A+    +SW GMIK E +        PL   + Q
Sbjct: 197 M--NSASYLASQQGARFSPF------ATPRPEASWTGMIKTEESPYYTHHQIPLGISSRQ 256

Query: 246 FDF------GDRRKSML--------PGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDV 305
             F      G RR   L         G+ A      Q A +       P      P    
Sbjct: 257 QHFVGSTSDGGRRFPFLQEGEISFGTGAGAGGVPMDQAAAAAAASVCQPLLKTVAPPPPP 316

Query: 306 ESSNGENVQKVLGNGS-DQFFNSDCALSLLSTPVEPGEINL 325
               G    K+  +G   Q  +SDCALSLLS P     I++
Sbjct: 317 HGGGGSGGGKMFSDGGLTQVLDSDCALSLLSAPANSTAIDV 349

[Close]

BLAST of Csor.00g001100 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.7e-42
Identity = 117/284 (41.20%), Postives = 149/284 (52.46%), Query Frame = 0


Query: 71  GSMDDMKGTRVSLIESSASRLMKRSRAPGSG----PQVPSCMVDGCSSDLSKCRDYHRRH 130
           G M + +         +A+   KR R  G G     Q PSC VDGC +DL KCRDYHRRH
Sbjct: 64  GGMGECEPGAARREREAAAGAAKRPRPAGPGGQQQQQCPSCAVDGCRADLGKCRDYHRRH 123

Query: 131 KVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATM 190
           KVCE HSKTP V + G+E RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQP TM
Sbjct: 124 KVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDTM 183

Query: 191 TLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSW-IGMIKPESN-------APLCSGNSQ 250
              +  F+   QG RF PF +  L A      SW  G++K E +        PL S +S 
Sbjct: 184 A--SASFIASQQGTRFSPFAHPRLEA------SWPPGVMKTEESPYHITHQIPLGSSSS- 243

Query: 251 FDFGDRRKSMLPGSLACDY----------KEKQLAISCIPIGLLPKSSDA-RPFLDV--- 310
                ++  +  G+    Y          +E +++ +   +   P ++ A +P L     
Sbjct: 244 ---SRQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRTGAP 303

Query: 311 -ESSNGENVQKVLGNGSDQFFNSDCALSLLSTPVEPGEINLSSM 328
            ESS     +     G  +  +SDCALSLLS P     I++S M
Sbjct: 304 SESSGAGGSKMFSDQGLARVLDSDCALSLLSAPANSSGIDVSRM 335

[Close]

BLAST of Csor.00g001100 vs. ExPASy Swiss-Prot
Match: Q49I57 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.4e-42
Identity = 117/285 (41.05%), Postives = 149/285 (52.28%), Query Frame = 0


Query: 71  GSMDDMKGTRVSLIESSASRLMKRSRAPGSG-----PQVPSCMVDGCSSDLSKCRDYHRR 130
           G M + +         +A+   KR R  G G      Q PSC VDGC +DL KCRDYHRR
Sbjct: 64  GGMGECEPGAARREREAAAGAAKRPRPAGPGGQQQQQQCPSCAVDGCRADLGKCRDYHRR 123

Query: 131 HKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPAT 190
           HKVCE HSKTP V + G+E RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQP T
Sbjct: 124 HKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDT 183

Query: 191 MTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSW-IGMIKPESN-------APLCSGNS 250
           M   +  F+   QG RF PF +  L A      SW  G++K E +        PL S +S
Sbjct: 184 MA--SASFIASQQGTRFSPFAHPRLEA------SWPPGVMKTEESPYHITHQIPLGSSSS 243

Query: 251 QFDFGDRRKSMLPGSLACDY----------KEKQLAISCIPIGLLPKSSDA-RPFLDV-- 310
                 ++  +  G+    Y          +E +++ +   +   P ++ A +P L    
Sbjct: 244 ----SRQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRTGA 303

Query: 311 --ESSNGENVQKVLGNGSDQFFNSDCALSLLSTPVEPGEINLSSM 328
             ESS     +     G  +  +SDCALSLLS P     I++S M
Sbjct: 304 PSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPANSSGIDVSRM 336

[Close]

BLAST of Csor.00g001100 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.7e-41
Identity = 130/329 (39.51%), Postives = 174/329 (52.89%), Query Frame = 0


Query: 52  DFDLDDKIFCWKGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP- 111
           DF  D K+   + IGN     GD     S+   K + ++  E S S   KR+R  G G  
Sbjct: 39  DFSFDLKL--GRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTN 98

Query: 112 QVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDD 171
           Q+P C+VDGC SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+
Sbjct: 99  QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDE 158

Query: 172 RKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSW 231
            KRSCRKRLDGHNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW
Sbjct: 159 GKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW 218

Query: 232 IGMIKPESNAPLCSGNSQFDFGDRRKSMLPGSLACDYKEKQLAISCIPIGLLPKS--SDA 291
              +   S A   +G+S   +G  +  ++  S A      +  I   PI   P S  S A
Sbjct: 219 GNSL--VSVAVAANGSS---YGQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIA 278

Query: 292 RPFLDVESSNGENVQKVLGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHF 351
           + F  ++         +    +    +SDCALSLLS+         SS S  +L+ P   
Sbjct: 279 KQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLS 338

Query: 352 IHSD-------GLGLESDPVNSGLVSDGS 361
           +  +       G GL     N+  VSDGS
Sbjct: 339 LSQEAVETVFYGSGLFE---NASAVSDGS 340

[Close]

BLAST of Csor.00g001100 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.7e-41
Identity = 130/329 (39.51%), Postives = 174/329 (52.89%), Query Frame = 0


Query: 52  DFDLDDKIFCWKGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP- 111
           DF  D K+   + IGN     GD     S+   K + ++  E S S   KR+R  G G  
Sbjct: 39  DFSFDLKL--GRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTN 98

Query: 112 QVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDD 171
           Q+P C+VDGC SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+
Sbjct: 99  QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDE 158

Query: 172 RKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSW 231
            KRSCRKRLDGHNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW
Sbjct: 159 GKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW 218

Query: 232 IGMIKPESNAPLCSGNSQFDFGDRRKSMLPGSLACDYKEKQLAISCIPIGLLPKS--SDA 291
              +   S A   +G+S   +G  +  ++  S A      +  I   PI   P S  S A
Sbjct: 219 GNSL--VSVAVAANGSS---YGQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIA 278

Query: 292 RPFLDVESSNGENVQKVLGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHF 351
           + F  ++         +    +    +SDCALSLLS+         SS S  +L+ P   
Sbjct: 279 KQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLS 338

Query: 352 IHSD-------GLGLESDPVNSGLVSDGS 361
           +  +       G GL     N+  VSDGS
Sbjct: 339 LSQEAVETVFYGSGLFE---NASAVSDGS 340

[Close]

BLAST of Csor.00g001100 vs. NCBI nr
Match: KAG6576133.1 (Squamosa promoter-binding-like protein 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 849 bits (2193), Expect = 6.73e-311
Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0


Query: 1   MVFNLDLNLTCEFLPEIEITLSFHGVKKVMMLQNWVSVVCQVDTYMFAVVDDFDLDDKIF 60
           MVFNLDLNLTCEFLPEIEITLSFHGVKKVMMLQNWVSVVCQVDTYMFAVVDDFDLDDKIF
Sbjct: 1   MVFNLDLNLTCEFLPEIEITLSFHGVKKVMMLQNWVSVVCQVDTYMFAVVDDFDLDDKIF 60

Query: 61  CWKGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCR 120
           CWKGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCR
Sbjct: 61  CWKGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCR 120

Query: 121 DYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRK 180
           DYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRK
Sbjct: 121 DYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRK 180

Query: 181 PQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFD 240
           PQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFD
Sbjct: 181 PQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFD 240

Query: 241 FGDRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGS 300
           FGDRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGS
Sbjct: 241 FGDRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGS 300

Query: 301 DQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGS 360
           DQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGS
Sbjct: 301 DQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGS 360

Query: 361 SHANSRCYPTFQDGLAGSSVDLFRLEISNINFVPLLSSSSLGIVKIVDFGYGSYDVD 417
           SHANSRCYPTFQDGLAGSSVDLFRLEISNINFVPLLSSSSLGIVKIVDFGYGSYDVD
Sbjct: 361 SHANSRCYPTFQDGLAGSSVDLFRLEISNINFVPLLSSSSLGIVKIVDFGYGSYDVD 417

[Close]

BLAST of Csor.00g001100 vs. NCBI nr
Match: XP_022954373.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata])

HSP 1 Score: 654 bits (1688), Expect = 2.13e-235
Identity = 320/322 (99.38%), Postives = 321/322 (99.69%), Query Frame = 0


Query: 63  KGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY 122
           +GIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY
Sbjct: 6   RGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY 65

Query: 123 HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 182
           HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ
Sbjct: 66  HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 125

Query: 183 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG 242
           PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG
Sbjct: 126 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG 185

Query: 243 DRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQ 302
           DRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQ
Sbjct: 186 DRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQ 245

Query: 303 FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH 362
           FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH
Sbjct: 246 FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH 305

Query: 363 ANSRCYPTFQDGLAGSSVDLFR 384
           AN RCYPTFQDGLAGSSVDLFR
Sbjct: 306 ANIRCYPTFQDGLAGSSVDLFR 327

[Close]

BLAST of Csor.00g001100 vs. NCBI nr
Match: XP_022954374.1 (squamosa promoter-binding-like protein 16 isoform X2 [Cucurbita moschata])

HSP 1 Score: 645 bits (1664), Expect = 6.65e-232
Identity = 316/317 (99.68%), Postives = 316/317 (99.68%), Query Frame = 0


Query: 68  MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHK 127
           MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHK
Sbjct: 1   MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHK 60

Query: 128 VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT 187
           VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT
Sbjct: 61  VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT 120

Query: 188 LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKS 247
           LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKS
Sbjct: 121 LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKS 180

Query: 248 MLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQFFNSD 307
           MLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQFFNSD
Sbjct: 181 MLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQFFNSD 240

Query: 308 CALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSHANSRC 367
           CALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSHAN RC
Sbjct: 241 CALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSHANIRC 300

Query: 368 YPTFQDGLAGSSVDLFR 384
           YPTFQDGLAGSSVDLFR
Sbjct: 301 YPTFQDGLAGSSVDLFR 317

[Close]

BLAST of Csor.00g001100 vs. NCBI nr
Match: XP_023523671.1 (squamosa promoter-binding-like protein 16 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 644 bits (1661), Expect = 2.87e-231
Identity = 316/323 (97.83%), Postives = 318/323 (98.45%), Query Frame = 0


Query: 63  KGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY 122
           +GIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY
Sbjct: 6   RGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY 65

Query: 123 HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 182
           HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ
Sbjct: 66  HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 125

Query: 183 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG 242
           PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG
Sbjct: 126 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG 185

Query: 243 DRRKSML-PGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSD 302
           DRRKSML PGSLACDYKEKQLAISCIPIGLLPKSSDA PFLDVESSNGENVQKV GNGSD
Sbjct: 186 DRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVFGNGSD 245

Query: 303 QFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSS 362
           QFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSG+VSDGSS
Sbjct: 246 QFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMVSDGSS 305

Query: 363 HANSRCYPTFQDGLAGSSVDLFR 384
           H N RCYPTFQDGLAGSSVDLFR
Sbjct: 306 HGNIRCYPTFQDGLAGSSVDLFR 328

[Close]

BLAST of Csor.00g001100 vs. NCBI nr
Match: XP_022991355.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita maxima])

HSP 1 Score: 640 bits (1652), Expect = 6.50e-230
Identity = 311/322 (96.58%), Postives = 317/322 (98.45%), Query Frame = 0


Query: 63  KGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY 122
           +GIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQ+PSCMVDGCSSDLSKCRDY
Sbjct: 6   RGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQIPSCMVDGCSSDLSKCRDY 65

Query: 123 HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 182
           HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ
Sbjct: 66  HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 125

Query: 183 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG 242
           PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAP+CSGNSQFDFG
Sbjct: 126 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPVCSGNSQFDFG 185

Query: 243 DRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQ 302
           DRRKSMLPGSLACDYKEKQ+AISCIP+GLLPKSSDARP+LDVES N  NVQKVLGNG DQ
Sbjct: 186 DRRKSMLPGSLACDYKEKQVAISCIPVGLLPKSSDARPYLDVESCNRGNVQKVLGNGPDQ 245

Query: 303 FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH 362
           FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH
Sbjct: 246 FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH 305

Query: 363 ANSRCYPTFQDGLAGSSVDLFR 384
           AN RCYPTFQDGLAGSSVDLFR
Sbjct: 306 ANIRCYPTFQDGLAGSSVDLFR 327

[Close]

BLAST of Csor.00g001100 vs. ExPASy TrEMBL
Match: A0A6J1GQX7 (squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456630 PE=4 SV=1)

HSP 1 Score: 654 bits (1688), Expect = 1.03e-235
Identity = 320/322 (99.38%), Postives = 321/322 (99.69%), Query Frame = 0


Query: 63  KGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY 122
           +GIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY
Sbjct: 6   RGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY 65

Query: 123 HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 182
           HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ
Sbjct: 66  HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 125

Query: 183 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG 242
           PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG
Sbjct: 126 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG 185

Query: 243 DRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQ 302
           DRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQ
Sbjct: 186 DRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQ 245

Query: 303 FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH 362
           FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH
Sbjct: 246 FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH 305

Query: 363 ANSRCYPTFQDGLAGSSVDLFR 384
           AN RCYPTFQDGLAGSSVDLFR
Sbjct: 306 ANIRCYPTFQDGLAGSSVDLFR 327

[Close]

BLAST of Csor.00g001100 vs. ExPASy TrEMBL
Match: A0A6J1GST7 (squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456630 PE=4 SV=1)

HSP 1 Score: 645 bits (1664), Expect = 3.22e-232
Identity = 316/317 (99.68%), Postives = 316/317 (99.68%), Query Frame = 0


Query: 68  MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHK 127
           MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHK
Sbjct: 1   MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHK 60

Query: 128 VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT 187
           VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT
Sbjct: 61  VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT 120

Query: 188 LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKS 247
           LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKS
Sbjct: 121 LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKS 180

Query: 248 MLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQFFNSD 307
           MLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQFFNSD
Sbjct: 181 MLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQFFNSD 240

Query: 308 CALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSHANSRC 367
           CALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSHAN RC
Sbjct: 241 CALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSHANIRC 300

Query: 368 YPTFQDGLAGSSVDLFR 384
           YPTFQDGLAGSSVDLFR
Sbjct: 301 YPTFQDGLAGSSVDLFR 317

[Close]

BLAST of Csor.00g001100 vs. ExPASy TrEMBL
Match: A0A6J1JSQ0 (squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488017 PE=4 SV=1)

HSP 1 Score: 640 bits (1652), Expect = 3.15e-230
Identity = 311/322 (96.58%), Postives = 317/322 (98.45%), Query Frame = 0


Query: 63  KGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY 122
           +GIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQ+PSCMVDGCSSDLSKCRDY
Sbjct: 6   RGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQIPSCMVDGCSSDLSKCRDY 65

Query: 123 HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 182
           HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ
Sbjct: 66  HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 125

Query: 183 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG 242
           PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAP+CSGNSQFDFG
Sbjct: 126 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPVCSGNSQFDFG 185

Query: 243 DRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQ 302
           DRRKSMLPGSLACDYKEKQ+AISCIP+GLLPKSSDARP+LDVES N  NVQKVLGNG DQ
Sbjct: 186 DRRKSMLPGSLACDYKEKQVAISCIPVGLLPKSSDARPYLDVESCNRGNVQKVLGNGPDQ 245

Query: 303 FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH 362
           FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH
Sbjct: 246 FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH 305

Query: 363 ANSRCYPTFQDGLAGSSVDLFR 384
           AN RCYPTFQDGLAGSSVDLFR
Sbjct: 306 ANIRCYPTFQDGLAGSSVDLFR 327

[Close]

BLAST of Csor.00g001100 vs. ExPASy TrEMBL
Match: A0A6J1JQH9 (squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488017 PE=4 SV=1)

HSP 1 Score: 631 bits (1628), Expect = 9.80e-227
Identity = 307/317 (96.85%), Postives = 312/317 (98.42%), Query Frame = 0


Query: 68  MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHK 127
           MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQ+PSCMVDGCSSDLSKCRDYHRRHK
Sbjct: 1   MGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQIPSCMVDGCSSDLSKCRDYHRRHK 60

Query: 128 VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT 187
           VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT
Sbjct: 61  VCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT 120

Query: 188 LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKS 247
           LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAP+CSGNSQFDFGDRRKS
Sbjct: 121 LNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPVCSGNSQFDFGDRRKS 180

Query: 248 MLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQFFNSD 307
           MLPGSLACDYKEKQ+AISCIP+GLLPKSSDARP+LDVES N  NVQKVLGNG DQFFNSD
Sbjct: 181 MLPGSLACDYKEKQVAISCIPVGLLPKSSDARPYLDVESCNRGNVQKVLGNGPDQFFNSD 240

Query: 308 CALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSHANSRC 367
           CALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSHAN RC
Sbjct: 241 CALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSHANIRC 300

Query: 368 YPTFQDGLAGSSVDLFR 384
           YPTFQDGLAGSSVDLFR
Sbjct: 301 YPTFQDGLAGSSVDLFR 317

[Close]

BLAST of Csor.00g001100 vs. ExPASy TrEMBL
Match: A0A5D3DM54 (Squamosa promoter-binding-like protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002310 PE=4 SV=1)

HSP 1 Score: 593 bits (1528), Expect = 2.41e-211
Identity = 291/322 (90.37%), Postives = 305/322 (94.72%), Query Frame = 0


Query: 63  KGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDY 122
           +GIGNM + SMDDMKGTRV+LIESS+SRLMKRSRAPGSG QVPSCMVDGCSSDLSKCRDY
Sbjct: 6   RGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLSKCRDY 65

Query: 123 HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 182
           HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ
Sbjct: 66  HRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQ 125

Query: 183 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFG 242
           PATMTLNAGRFLYGNQGPRFLPFGNQLLSAS+DVSSSWIGMIKPE+NAPLC GNSQFDF 
Sbjct: 126 PATMTLNAGRFLYGNQGPRFLPFGNQLLSASSDVSSSWIGMIKPENNAPLCGGNSQFDFT 185

Query: 243 DRRKSMLPGSLACDYKEKQLAISCIPIGLLPKSSDARPFLDVESSNGENVQKVLGNGSDQ 302
           DRRKSMLPGSL+ DYKEKQLAISCIPIGLLPKSSD +PFL+V SSNG NVQKVLGNGS++
Sbjct: 186 DRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLGNGSNR 245

Query: 303 FFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGLVSDGSSH 362
           FF+SDCALSLLSTPVEPGEINLSSMSQSNLI PAHFIHSDGLGLE DP++SGLVSDGSS 
Sbjct: 246 FFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVSDGSSD 305

Query: 363 ANSRCYPTFQDGLAGSSVDLFR 384
           AN RCY TFQDG  GSS DLFR
Sbjct: 306 ANIRCYSTFQDGPDGSSGDLFR 327

[Close]

BLAST of Csor.00g001100 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 170.6 bits (431), Expect = 2.6e-42
Identity = 130/329 (39.51%), Postives = 174/329 (52.89%), Query Frame = 0


Query: 52  DFDLDDKIFCWKGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP- 111
           DF  D K+   + IGN     GD     S+   K + ++  E S S   KR+R  G G  
Sbjct: 39  DFSFDLKL--GRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTN 98

Query: 112 QVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDD 171
           Q+P C+VDGC SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+
Sbjct: 99  QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDE 158

Query: 172 RKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSW 231
            KRSCRKRLDGHNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW
Sbjct: 159 GKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW 218

Query: 232 IGMIKPESNAPLCSGNSQFDFGDRRKSMLPGSLACDYKEKQLAISCIPIGLLPKS--SDA 291
              +   S A   +G+S   +G  +  ++  S A      +  I   PI   P S  S A
Sbjct: 219 GNSL--VSVAVAANGSS---YGQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIA 278

Query: 292 RPFLDVESSNGENVQKVLGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHF 351
           + F  ++         +    +    +SDCALSLLS+         SS S  +L+ P   
Sbjct: 279 KQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLS 338

Query: 352 IHSD-------GLGLESDPVNSGLVSDGS 361
           +  +       G GL     N+  VSDGS
Sbjct: 339 LSQEAVETVFYGSGLFE---NASAVSDGS 340

[Close]

BLAST of Csor.00g001100 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 170.6 bits (431), Expect = 2.6e-42
Identity = 130/329 (39.51%), Postives = 174/329 (52.89%), Query Frame = 0


Query: 52  DFDLDDKIFCWKGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP- 111
           DF  D K+   + IGN     GD     S+   K + ++  E S S   KR+R  G G  
Sbjct: 39  DFSFDLKL--GRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTN 98

Query: 112 QVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDD 171
           Q+P C+VDGC SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+
Sbjct: 99  QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDE 158

Query: 172 RKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSW 231
            KRSCRKRLDGHNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW
Sbjct: 159 GKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW 218

Query: 232 IGMIKPESNAPLCSGNSQFDFGDRRKSMLPGSLACDYKEKQLAISCIPIGLLPKS--SDA 291
              +   S A   +G+S   +G  +  ++  S A      +  I   PI   P S  S A
Sbjct: 219 GNSL--VSVAVAANGSS---YGQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIA 278

Query: 292 RPFLDVESSNGENVQKVLGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHF 351
           + F  ++         +    +    +SDCALSLLS+         SS S  +L+ P   
Sbjct: 279 KQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLS 338

Query: 352 IHSD-------GLGLESDPVNSGLVSDGS 361
           +  +       G GL     N+  VSDGS
Sbjct: 339 LSQEAVETVFYGSGLFE---NASAVSDGS 340

[Close]

BLAST of Csor.00g001100 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 170.6 bits (431), Expect = 2.6e-42
Identity = 130/329 (39.51%), Postives = 174/329 (52.89%), Query Frame = 0


Query: 52  DFDLDDKIFCWKGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP- 111
           DF  D K+   + IGN     GD     S+   K + ++  E S S   KR+R  G G  
Sbjct: 39  DFSFDLKL--GRNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTN 98

Query: 112 QVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDD 171
           Q+P C+VDGC SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+
Sbjct: 99  QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDE 158

Query: 172 RKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSW 231
            KRSCRKRLDGHNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW
Sbjct: 159 GKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSW 218

Query: 232 IGMIKPESNAPLCSGNSQFDFGDRRKSMLPGSLACDYKEKQLAISCIPIGLLPKS--SDA 291
              +   S A   +G+S   +G  +  ++  S A      +  I   PI   P S  S A
Sbjct: 219 GNSL--VSVAVAANGSS---YGQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIA 278

Query: 292 RPFLDVESSNGENVQKVLGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHF 351
           + F  ++         +    +    +SDCALSLLS+         SS S  +L+ P   
Sbjct: 279 KQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLS 338

Query: 352 IHSD-------GLGLESDPVNSGLVSDGS 361
           +  +       G GL     N+  VSDGS
Sbjct: 339 LSQEAVETVFYGSGLFE---NASAVSDGS 340

[Close]

BLAST of Csor.00g001100 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 140.6 bits (353), Expect = 2.9e-33
Identity = 71/130 (54.62%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 86  SSASRLMKRSRAPGSGP--QVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQ 145
           SS  R  +R R  GSG   Q+P C V+GC  DL+  + Y+ RH+VC +HSKTPKVT+ G 
Sbjct: 51  SSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGI 110

Query: 146 EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFL 205
           EQRFCQQCSRFH L EFD  KRSCR+RL GHN RRRKPQPA++++ A R  YG   P   
Sbjct: 111 EQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLASR--YGRIAPSLY 170

Query: 206 PFGNQLLSAS 214
             G+  ++ S
Sbjct: 171 ENGDAGMNGS 178

[Close]

BLAST of Csor.00g001100 vs. TAIR 10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 134.0 bits (336), Expect = 2.7e-31
Identity = 68/142 (47.89%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 74  DDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHKVCELHS 133
           +D+    ++L+  S     K++++ G   QVP C +DGC  DLS  +DYHR+H+VCE HS
Sbjct: 144 NDLSAVSMNLLTPSVV-ARKKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHS 203

Query: 134 KTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRF 193
           K PKV + G E+RFCQQCSRFH++ EFD++KRSCRKRL  HN RRRKPQ     LN+ R 
Sbjct: 204 KCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQ-GVFPLNSERV 263

Query: 194 LYGNQGPRFLPFGNQLLSASND 216
               Q    L  G  L + S +
Sbjct: 264 FDRRQHTSMLWNGLSLNTRSEE 283

The following BLAST results are available for this feature:

BLAST of Csor.00g001100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YZE8	1.6e-44	42.70	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q49I55	5.7e-42	41.20	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]
Q49I57	7.4e-42	41.05	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1	[more]
B9DI20	3.7e-41	39.51	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	3.7e-41	39.51	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]

BLAST of Csor.00g001100 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576133.1	6.73e-311	100.00	Squamosa promoter-binding-like protein 16, partial [Cucurbita argyrosperma subsp...	[more]
XP_022954373.1	2.13e-235	99.38	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata]	[more]
XP_022954374.1	6.65e-232	99.68	squamosa promoter-binding-like protein 16 isoform X2 [Cucurbita moschata]	[more]
XP_023523671.1	2.87e-231	97.83	squamosa promoter-binding-like protein 16 isoform X3 [Cucurbita pepo subsp. pepo...	[more]
XP_022991355.1	6.50e-230	96.58	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g001100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQX7	1.03e-235	99.38	squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1GST7	3.22e-232	99.68	squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita moschata OX=36...	[more]
A0A6J1JSQ0	3.15e-230	96.58	squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1JQH9	9.80e-227	96.85	squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita maxima OX=3661...	[more]
A0A5D3DM54	2.41e-211	90.37	Squamosa promoter-binding-like protein 16 OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Csor.00g001100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	2.6e-42	39.51	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	2.6e-42	39.51	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	2.6e-42	39.51	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT2G42200.1	2.9e-33	54.62	squamosa promoter binding protein-like 9	[more]
AT1G27370.1	2.7e-31	47.89	squamosa promoter binding protein-like 10	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 107..180 e-value: 1.1E-28 score: 99.4
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 104..181 score: 31.718283
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 98..168 e-value: 2.4E-32 score: 112.9
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 105..186
None	No IPR available	PIRSR	PIRSR037575-1	PIRSR037575-1	coord: 99..180 e-value: 6.0E-36 score: 120.6
None	No IPR available	PANTHER	PTHR31251:SF144	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A ISOFORM X1	coord: 65..372
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 65..372

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g001100.m01	Csor.00g001100.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding