Csor.00g000200 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTGATCTTATCATCCTCTGCTTTCTCCTTGTGGGTCTCTCTTTTTCGCCTGTAATTTCCACTAATTCTGAAGGTAAACTTTGAATCCAATTGAATGCCTATGAACTGTTTGATGTTTTGCCTCTTTGAACTTTTTTTTTTAATTTACTTTTGGCTTCTTGGATTGCCTGTAATTTCCTCTAATTCTGAAGGTAAACTTTGAATCCAATTGGATGCCCATGAACTGTTTGATGTTTTGCCTCTTTGAACTTTTTTTTTACTTCATGGGTTGCCTGTAATTTCCACTAATTCTGAAGGTAAACTTTGAATCGAATTGAATGCCCATGAACTGTTTGATGTTTTGCCTCTTTGAAATTTTTTTTTAGTTTACTTTTGACTTCTGGGGTTGGTTTTTGAGTTTCTTGTTCATGGTTTGGTTGATCTTCTGGTTTCAGGAAATGCTCTACATGCTCTTAGGAGAAGGCTGTCTGATCCCACTAATGTGCTGCAGAGTTGGGACCCTACGCTGGTTAATCCTTGCACTTGGTTTCATGTTACCTGTGATTCTGAAAACCATGTGATCCGCTTGTGAGATTCTTCCTATATGGGTTTCTTTGATTGCCTGCAACATGGAACATAGTTGAAATTGAGCCTCTTTTCTCTGTGTTTTCAGGGATTTGGGAAACTCGAACATTTCTGGGACTTTGGGGCCTGAAATTGGTGACCTCCAGCATCTTCAATATCTGTATTGCTCTACATCTTCATCAATTTGTATATATGTATAGTTTTTCATGTATTTGAGCTTTGCCATGTTTGATATCCTATAAATTTTCCTGTGAGCTGACATGTTATCGTGTCTGTAATCATTCGAGATGCATGTAAAACTGGCGGAAACTAACAGAAGAGTATAAGGAATGGTGTCCTTCATAAGTTGGAAATTCTATGGCTAAAAGAACATGTCTTGTTTTTCAATGCCTTCCAGGGAGCTCTACAGGAATGGGATAAGTGGAAAAATCCCCACTGAGATAGGTAATTTGAGAAACCTCGTAAGCATGGATTTGTACGAGAACAAATTTGAAGGAAGGATTCCAAAATCTTTCGCCAAACTCAAGTCACTTAGATTTCTGTAAGCATATCCTTCTAATTCTAACTATGAATGAAGTGTTTTGTTCATTTGTGAGATCCCTCGTCGTTTAGAGAGGGAAACGAAGCATTCCTTATAAGGGTGTAGAAAGCTCTCTCTAGTAGACGCGTTTTAAAACCGTGAGGCTAACGGCGATGCTTAACGGGCCAAAGCGAACAATGTCTACTAGCGGTGGGGTTGAGCTATTACATCATTTCTCTCACTATGTAAATCTAATTGGGTCCAATTTGCATAAACAGACGGATGAACAACAACAAGTTAACAGGCTCGATTCCGAGGGAACTTTCATCACTCTCTGAACTCAAAATTTTGTAAGTTTGATTTAGAAACAATTGCTTCGTTCTCTAATCTTGTTCTCTCTCTACACTTTATGGAAAACTAAGGTTGTCTTTTAACTTTTCCTGCAGTGATGTCTCAAACAATGATCTCTGTGGAACAATCCCTGTTGATGGACCCTTTGCTGATTTCTCGATGGAAAGGTGACGAGCTCTTTTGATTTTTGTTCTTCTCTGATTTTCTCTGAACATATTTCATGAATAAACTTACTTCATAACTAAGATAACTGATGTTTATATTTATATATCATATGCATATCTAGATTTGTTTATATTTAAAGTTACTAAGCTTATGTTTATATACTTATAAAACAAGTTTTGATGTATGTTACTCTTGAAGTTTTGATGTATGTTAGAGTACTTATAACTAGTACCTTACTCATGTCTATTGTGATACTGAGTATCTGCTACGTGTCCTACAAGTGATGGATTGTTAAAGTATTTGAAATGTCTCGAACGGTCTCGTTATCCTTGTTAAAGTATCTGTTGAGAATGTGATCAGAGTCTCACATCCTTAGATTAGGGAAGAACGTGAATATATAAGTGAAAGACAATGTGGTATGAGGTTTTTTTTTGGAAACAAGTAGACAATATCATATGTTTGCTTTGGTATGTAGAAGCTTGTTGTTTTTAAAAAGTGATATTGGAGCCTACTCCCTACCTAGCTGTGTCAGCTTGAGCGTTGAACAAAGAAATGGTGAGTCTCAAAAGATGTATTCAAGGTGTGATCTGTAGTTGAGCAATATGCTCTAGTAAAGATCTTGGAGTTAACCTGAATATGGATAGATGACTGTTTGAGGGGAGACTTGATAGTCTTTGCCTCAAGAGGAGGATTGCTGGGAATGCAACTAAAGTTCTACCTTGACTAAATTAGGAGAAGATCACAAGCATATAAATGAAGGACAGTATCTCTATTGGTACGAGACTTATTTCCAAAGTAGATAATATTATACGATTGTACAGATACGTGGAGGGTCTTGCCTCCTAACAGTATCCATATTACATATGTCACTGTTGTTGTTCTTGATTATCTGGTTGAATTTTTGGTTTTTGGGAATTTATGGCCACTCTTTTTTCTTGCTTGTCACAACGACGAATCTAACCTGGAATCCTAGAGTACACGTCCAATTGAATGACATGTTTTGTTGACCTTCTCTGTGATAACAGATTCTTGATCGATTAACTATAGTCTGTACACGTTCTCTTCTTTGCTGCAGTTATGAAAACAACAGGCTGAGTGGCCCCGAGTTGCAAGGACTTGTACCATATGACTTTGGATGCTGA ATGGCTTCTGATCTTATCATCCTCTGCTTTCTCCTTGTGGGTCTCTCTTTTTCGCCTGTAATTTCCACTAATTCTGAAGGAAATGCTCTACATGCTCTTAGGAGAAGGCTGTCTGATCCCACTAATGTGCTGCAGAGTTGGGACCCTACGCTGGTTAATCCTTGCACTTGGTTTCATGTTACCTGTGATTCTGAAAACCATGTGATCCGCTTGGATTTGGGAAACTCGAACATTTCTGGGACTTTGGGGCCTGAAATTGGTGACCTCCAGCATCTTCAATATCTGGAGCTCTACAGGAATGGGATAAGTGGAAAAATCCCCACTGAGATAGGTAATTTGAGAAACCTCGTAAGCATGGATTTGTACGAGAACAAATTTGAAGGAAGGATTCCAAAATCTTTCGCCAAACTCAAGTCACTTAGATTTCTACGGATGAACAACAACAAGTTAACAGGCTCGATTCCGAGGGAACTTTCATCACTCTCTGAACTCAAAATTTTTGATGTCTCAAACAATGATCTCTGTGGAACAATCCCTGTTGATGGACCCTTTGCTGATTTCTCGATGGAAAGTTATGAAAACAACAGGCTGAGTGGCCCCGAGTTGCAAGGACTTGTACCATATGACTTTGGATGCTGA ATGGCTTCTGATCTTATCATCCTCTGCTTTCTCCTTGTGGGTCTCTCTTTTTCGCCTGTAATTTCCACTAATTCTGAAGGAAATGCTCTACATGCTCTTAGGAGAAGGCTGTCTGATCCCACTAATGTGCTGCAGAGTTGGGACCCTACGCTGGTTAATCCTTGCACTTGGTTTCATGTTACCTGTGATTCTGAAAACCATGTGATCCGCTTGGATTTGGGAAACTCGAACATTTCTGGGACTTTGGGGCCTGAAATTGGTGACCTCCAGCATCTTCAATATCTGGAGCTCTACAGGAATGGGATAAGTGGAAAAATCCCCACTGAGATAGGTAATTTGAGAAACCTCGTAAGCATGGATTTGTACGAGAACAAATTTGAAGGAAGGATTCCAAAATCTTTCGCCAAACTCAAGTCACTTAGATTTCTACGGATGAACAACAACAAGTTAACAGGCTCGATTCCGAGGGAACTTTCATCACTCTCTGAACTCAAAATTTTTGATGTCTCAAACAATGATCTCTGTGGAACAATCCCTGTTGATGGACCCTTTGCTGATTTCTCGATGGAAAGTTATGAAAACAACAGGCTGAGTGGCCCCGAGTTGCAAGGACTTGTACCATATGACTTTGGATGCTGA MASDLIILCFLLVGLSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSENHVIRLDLGNSNISGTLGPEIGDLQHLQYLELYRNGISGKIPTEIGNLRNLVSMDLYENKFEGRIPKSFAKLKSLRFLRMNNNKLTGSIPRELSSLSELKIFDVSNNDLCGTIPVDGPFADFSMESYENNRLSGPELQGLVPYDFGC Homology
BLAST of Csor.00g000200 vs. ExPASy Swiss-Prot
Match: Q6NQP4 (Leucine-rich repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRR2 PE=2 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 2.0e-75 Identity = 131/208 (62.98%), Postives = 161/208 (77.40%), Query Frame = 0
BLAST of Csor.00g000200 vs. ExPASy Swiss-Prot
Match: Q9FPJ5 (Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 2.9e-74 Identity = 126/203 (62.07%), Postives = 160/203 (78.82%), Query Frame = 0
BLAST of Csor.00g000200 vs. ExPASy Swiss-Prot
Match: B8ABC2 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=LRR1 PE=3 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 4.6e-72 Identity = 125/190 (65.79%), Postives = 146/190 (76.84%), Query Frame = 0
BLAST of Csor.00g000200 vs. ExPASy Swiss-Prot
Match: Q5VQP7 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LRR1 PE=1 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 4.6e-72 Identity = 125/190 (65.79%), Postives = 146/190 (76.84%), Query Frame = 0
BLAST of Csor.00g000200 vs. ExPASy Swiss-Prot
Match: B8BB68 (LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.6e-61 Identity = 109/181 (60.22%), Postives = 140/181 (77.35%), Query Frame = 0
BLAST of Csor.00g000200 vs. NCBI nr
Match: KAG6571929.1 (Leucine-rich repeat protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 436 bits (1121), Expect = 2.14e-154 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Csor.00g000200 vs. NCBI nr
Match: XP_023553853.1 (leucine-rich repeat protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 431 bits (1107), Expect = 2.92e-152 Identity = 208/212 (98.11%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of Csor.00g000200 vs. NCBI nr
Match: XP_022952577.1 (leucine-rich repeat protein 2-like [Cucurbita moschata]) HSP 1 Score: 430 bits (1106), Expect = 4.14e-152 Identity = 209/212 (98.58%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of Csor.00g000200 vs. NCBI nr
Match: XP_022972449.1 (leucine-rich repeat protein 2-like [Cucurbita maxima]) HSP 1 Score: 428 bits (1100), Expect = 3.41e-151 Identity = 207/212 (97.64%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of Csor.00g000200 vs. NCBI nr
Match: XP_004136945.1 (leucine-rich repeat protein 2 [Cucumis sativus] >KGN43859.1 hypothetical protein Csa_017226 [Cucumis sativus]) HSP 1 Score: 404 bits (1039), Expect = 6.81e-142 Identity = 194/212 (91.51%), Postives = 205/212 (96.70%), Query Frame = 0
BLAST of Csor.00g000200 vs. ExPASy TrEMBL
Match: A0A6J1GKS9 (leucine-rich repeat protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111455228 PE=4 SV=1) HSP 1 Score: 430 bits (1106), Expect = 2.01e-152 Identity = 209/212 (98.58%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of Csor.00g000200 vs. ExPASy TrEMBL
Match: A0A6J1IBL0 (leucine-rich repeat protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111471009 PE=4 SV=1) HSP 1 Score: 428 bits (1100), Expect = 1.65e-151 Identity = 207/212 (97.64%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of Csor.00g000200 vs. ExPASy TrEMBL
Match: A0A0A0K4G9 (LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071480 PE=4 SV=1) HSP 1 Score: 404 bits (1039), Expect = 3.30e-142 Identity = 194/212 (91.51%), Postives = 205/212 (96.70%), Query Frame = 0
BLAST of Csor.00g000200 vs. ExPASy TrEMBL
Match: A0A1S3BZX3 (somatic embryogenesis receptor kinase 1-like OS=Cucumis melo OX=3656 GN=LOC103495297 PE=4 SV=1) HSP 1 Score: 403 bits (1035), Expect = 1.34e-141 Identity = 194/212 (91.51%), Postives = 205/212 (96.70%), Query Frame = 0
BLAST of Csor.00g000200 vs. ExPASy TrEMBL
Match: A0A6J1D3U1 (leucine-rich repeat protein 2-like OS=Momordica charantia OX=3673 GN=LOC111017346 PE=4 SV=1) HSP 1 Score: 398 bits (1023), Expect = 9.07e-140 Identity = 189/212 (89.15%), Postives = 206/212 (97.17%), Query Frame = 0
BLAST of Csor.00g000200 vs. TAIR 10
Match: AT3G43740.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 283.5 bits (724), Expect = 1.4e-76 Identity = 131/208 (62.98%), Postives = 161/208 (77.40%), Query Frame = 0
BLAST of Csor.00g000200 vs. TAIR 10
Match: AT5G21090.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 279.6 bits (714), Expect = 2.0e-75 Identity = 126/203 (62.07%), Postives = 160/203 (78.82%), Query Frame = 0
BLAST of Csor.00g000200 vs. TAIR 10
Match: AT3G43740.2 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 267.7 bits (683), Expect = 8.0e-72 Identity = 131/238 (55.04%), Postives = 161/238 (67.65%), Query Frame = 0
BLAST of Csor.00g000200 vs. TAIR 10
Match: AT1G71830.1 (somatic embryogenesis receptor-like kinase 1 ) HSP 1 Score: 236.1 bits (601), Expect = 2.6e-62 Identity = 115/197 (58.38%), Postives = 146/197 (74.11%), Query Frame = 0
BLAST of Csor.00g000200 vs. TAIR 10
Match: AT1G34210.1 (somatic embryogenesis receptor-like kinase 2 ) HSP 1 Score: 232.6 bits (592), Expect = 2.8e-61 Identity = 112/200 (56.00%), Postives = 148/200 (74.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|