CsaV3_UNG208440 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_UNG208440
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	scaffold18_1: 660755 .. 662617 (+)
RNA-Seq Expression	CsaV3_UNG208440
Synteny	CsaV3_UNG208440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGTCTTATGCTTTACAAGTCTTCTTTCGTAAGAGTCAGTCGCTGTGGAACTTCAATCGGCATCGGAATGAGACCGATCGGCCGAGTTGGAGCAGCTTTACCTAGTAGGATGAGATCTTGTCCCATTTCTTCAGAGGAAAAATGAGATAGATCTTGAATCAGAGAAAAAGGGGTTAGATAGAGATAGGCTTTCCCAATAGAGAGTTGGGCCGGGGAAGAGTTCTTCTTGAGTCAGCTAGGTGCGAAGCCACTCGACGAAGGATAGGATAGAAGCTGCGAGAAAGAGTTCTAAGATCTCAAGGATAGAAGAAGCTCTCCCGCTCCGTGGGGGGCGCAGATCAAGGGAAGAAGCGCAGAAGTAGTCCCGCGAATGAAATAATCTGATATAAGAAATTGAAAAAGAAGAAATTCAGAACAAATATCGGTAGTTCTTGCTTTCTCTCTGAATCTTCCTCTTCGAAAGAAGAACCTACGGCAAGGCGCCATTGAATCAGACTAGGGACAAACTCCCCGATCGACAGGGCTAATCAGCCTCCCTCTAAGTTCTTTCTACTACTACAATAGCCTCAGTCTCATGACTATGCTTTCCCCTTTTCTGAATATCGTACCGAACCCAAAGTTGAGACCACCCACTCCGCGGTTGATTCGCAGTGGCTTGTCTTGTTTGTGTCGTAGTTGTTCAAGCAAAGCGCTTAGATTGTTAACTCATATAACGAAATAATCTATATAATGAGAAAAGATTTCCCATACCGAACCGAAGAGAAGCATTCCAAAGAACTGAGATCGGAAAGTGGACTAAGCAAAGTCGACACGATGTACAAAGTAACTCGACCCCAAACCTAAGGCAGAGGGACTAGCTAGGGCCGGGCCCCATTCCATCGACCGCGGTGAAGGAATTATGCCCGATCGGGGCATATGGTTTGACAACTACGAAAGAAAGCGGAAATCTTCTTTGAACCTGGGTTTCTTATATAGAAAAGACTACCCGTCGGACCCTGACATTCGCACTAAACAATGGCGTCAAAGAGGCAAGGGGAAGAGTGAATGGGATCGACCGGATAGGAAGAAAGAAAGCTCCCTGAGTCTGACTTAGTTAGTTGGGGGGTCAGTCCCAGTTGCAAGTAAGATAGGATAAGACCGACGATGCATAGCCACTTGTTCATTCTACAATCCATGAAATTGAGAAAAAAGGCTTGATATTAGCCTGGGGCTAGAGATCTTCCTTACTCCCGAAACGACTCAAGAGATCCAGCAACCACTCCTTCAACTGGTCCGAAGGACTTCTTTATGGAACTTAAGCTTGTTGTAGGCTATACGAGTTGATTGCATTTTCAAAGCAAATGCTAATCCTTGTTCATTGATTTCTCACTTGGCTAATTCCCGGATGAATACCAAAGGTTTGAGTCCATTTTTGAACATCTTTTCCCGTTCGGAGGCAAACTAAGCTGCTTAAGCCACGGGAGAGTCATATTATGGATGGGGATCCAGCGGACCTGGTTGAAGGAGCCGTAGTTGCTGTCCTTGCTTTTGCTGCTATCTCTCTTCCCTAACGCCGGATTTCATCCTTTTATTTCATTGATTTATGTGCACCCTACTATTCATGGGAATAATGGACTCATTCCTTGATGGAGGCATCTGAGTTGTTGTTAGTTCTACTAATCGGTTACCTGACGGGAAATACCCCACGTAGCGGTAACCTAGAACCTAAAATAAATACGAAAGCCTAGCCTCCAGAAAGATAAAGTAGCGCTCGGGGAATAGGTTTCTTTCCGTGTTCAAGGTCTTAAAAAGGGTAAGGCCTTTCCTTATTCAATCAGTCTGAACAAGTTTGAGTTCCATGAAGCTACTTTATTAATGGGGTGA

mRNA sequence

ATGCCCGATCGGGGCATATGGTTTGACAACTACGAAAGAAAGCGGAAATCTTCTTTGAACCTGGGTTTCTTATATAGAAAAGACTACCCGTCGGACCCTGACATTCGCACTAAACAATGGCGTCAAAGAGGCAAGGGGAAGAGTGAATGGGATCGACCGGATAGGAAGAAAGAAAGCTCCCTGAGTCTGACTTAG

Coding sequence (CDS)

ATGCCCGATCGGGGCATATGGTTTGACAACTACGAAAGAAAGCGGAAATCTTCTTTGAACCTGGGTTTCTTATATAGAAAAGACTACCCGTCGGACCCTGACATTCGCACTAAACAATGGCGTCAAAGAGGCAAGGGGAAGAGTGAATGGGATCGACCGGATAGGAAGAAAGAAAGCTCCCTGAGTCTGACTTAG

Protein sequence

MPDRGIWFDNYERKRKSSLNLGFLYRKDYPSDPDIRTKQWRQRGKGKSEWDRPDRKKESSLSLT*

Homology

The following BLAST results are available for this feature:

BLAST of CsaV3_UNG208440 vs.


Match Name	E-value	Identity	Description

BLAST of CsaV3_UNG208440 vs.


Match Name	E-value	Identity	Description

BLAST of CsaV3_UNG208440 vs.


Match Name	E-value	Identity	Description

BLAST of CsaV3_UNG208440 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_UNG208440.1	CsaV3_UNG208440.1	mRNA