Homology
BLAST of CsaV3_UNG170340 vs. NCBI nr
Match:
XP_031742312.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis sativus])
HSP 1 Score: 756.9 bits (1953), Expect = 8.2e-215
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
Query: 361 TQNGENEEALILFRL 376
TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375
BLAST of CsaV3_UNG170340 vs. NCBI nr
Match:
XP_004149135.2 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600 [Cucumis sativus])
HSP 1 Score: 756.9 bits (1953), Expect = 8.2e-215
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
Query: 361 TQNGENEEALILFRL 376
TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375
BLAST of CsaV3_UNG170340 vs. NCBI nr
Match:
KAE8637288.1 (hypothetical protein CSA_004540, partial [Cucumis sativus])
HSP 1 Score: 756.9 bits (1953), Expect = 8.2e-215
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
Query: 361 TQNGENEEALILFRL 376
TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375
BLAST of CsaV3_UNG170340 vs. NCBI nr
Match:
XP_008464730.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600 isoform X1 [Cucumis melo] >KAA0065508.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08748.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 739.6 bits (1908), Expect = 1.4e-209
Identity = 367/375 (97.87%), Postives = 369/375 (98.40%), Query Frame = 0
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MA NGLVKHLKGD LFLDSSPFSKLLNQC RSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1 MARNGLVKHLKGDFLFLDSSPFSKLLNQCVRSRSARDTSRVHACIIKSPFASETFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP+VDQCSWN
Sbjct: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPEVDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQHGRF EALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFYEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSDVYMGSALVDMYSKCGRVEYAQS FDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSAFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMI+CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR MFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARSMFSNMMVKDVITWNALIAGC 360
Query: 361 TQNGENEEALILFRL 376
TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375
BLAST of CsaV3_UNG170340 vs. NCBI nr
Match:
XP_038891428.1 (pentatricopeptide repeat-containing protein At2g13600-like [Benincasa hispida])
HSP 1 Score: 717.2 bits (1850), Expect = 7.2e-203
Identity = 352/375 (93.87%), Postives = 366/375 (97.60%), Query Frame = 0
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MAGNGLVKHL+G+L FLDSSPFSKLLNQCAR +S RDTSRVHA IIKSPFASETFIQNRL
Sbjct: 1 MAGNGLVKHLRGELPFLDSSPFSKLLNQCARLKSVRDTSRVHARIIKSPFASETFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCVDVARKLFDR+LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61 IDVYGKCGCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQH F EAL+YF QMHG GF++NEYSFGSALSACAGLQDLKLGSQIHSL+YRS
Sbjct: 121 SMISGFEQHDCFGEALIYFTQMHGQGFVMNEYSFGSALSACAGLQDLKLGSQIHSLIYRS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSDVYMGSALVDMYSKCGRV+YAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMI+CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRI+EARI+FD+MPIRSVVSETSMVSGYAKAS+VKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRISEARIVFDLMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360
Query: 361 TQNGENEEALILFRL 376
TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375
BLAST of CsaV3_UNG170340 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 473.4 bits (1217), Expect = 2.4e-132
Identity = 229/361 (63.43%), Postives = 285/361 (78.95%), Query Frame = 0
Query: 16 FLDSSPFSKLLNQCARSR-SARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVAR 75
F DSSPF+KLL+ C +S+ SA VHA +IKS F++E FIQNRLID Y KCG ++ R
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 76 KLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 135
++FD+M +RNI++WNS++ TK GFLD+A +F MP+ DQC+WNSM+SGF QH R +E
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 136 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 195
AL YFA MH GF++NEYSF S LSAC+GL D+ G Q+HSL+ +S +LSDVY+GSALVD
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 196 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 255
MYSKCG V AQ VFDEM R+ VSWNSLITC+EQNGP EAL +F M++ VEPDEVT
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 256 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 315
LASV+SACA++SAIK GQ++H RVVK D+ RND+IL NA +DMYAKC+RI EAR IFD M
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 316 PIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 375
PIR+V++ETSM+SGYA A+ K AR MF+ M ++V++WNALIAG TQNGENEEAL LF
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
BLAST of CsaV3_UNG170340 vs. ExPASy Swiss-Prot
Match:
Q9CAA8 (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1)
HSP 1 Score: 235.7 bits (600), Expect = 8.4e-61
Identity = 118/340 (34.71%), Postives = 199/340 (58.53%), Query Frame = 0
Query: 40 RVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSG 99
++H +IK F S + + L+ +Y GC+ A+K+F + +RN +NS++ G
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219
Query: 100 FLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALS 159
++DA+ +F M + D SW +MI G Q+G EA+ F +M G +++Y FGS L
Sbjct: 220 MIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 279
Query: 160 ACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVS 219
AC GL + G QIH+ + R+N+ +Y+GSAL+DMY KC + YA++VFD M ++ VS
Sbjct: 280 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 339
Query: 220 WNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVV 279
W +++ Y Q G +EA+KIF++M + G++PD TL +SACA +S+++EG Q H + +
Sbjct: 340 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 399
Query: 280 KCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR 339
+ + + N+L+ +Y KC I+++ +F+ M +R VS T+MVS YA+ +
Sbjct: 400 -TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 459
Query: 340 YMFSNM----MVKDVITWNALIAGCTQNGENEEALILFRL 376
+F M + D +T +I+ C++ G E+ F+L
Sbjct: 460 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497
BLAST of CsaV3_UNG170340 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 211.1 bits (536), Expect = 2.2e-53
Identity = 118/356 (33.15%), Postives = 195/356 (54.78%), Query Frame = 0
Query: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
D F L+ CA+SR+ + ++H I+K +A + F+QN L+ Y +CG +D ARK+F
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192
Query: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
D M ERN+ SW S+IC + + F DAV +F +M + ++ + NS+
Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV--------------- 252
Query: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
+ +SACA L+DL+ G ++++ + S + M SALVDMY
Sbjct: 253 ---------------TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 312
Query: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
KC ++ A+ +FDE + N++ + Y + G EAL +F M+ GV PD +++ S
Sbjct: 313 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 372
Query: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
+S+C+ + I G+ H V++ + F + + NAL+DMY KC+R + A IFD M +
Sbjct: 373 AISSCSQLRNILWGKSCHGYVLR-NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 432
Query: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILF 374
+VV+ S+V+GY + +V A F M K++++WN +I+G Q EEA+ +F
Sbjct: 433 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
BLAST of CsaV3_UNG170340 vs. ExPASy Swiss-Prot
Match:
Q9LIC3 (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)
HSP 1 Score: 208.4 bits (529), Expect = 1.4e-52
Identity = 120/357 (33.61%), Postives = 197/357 (55.18%), Query Frame = 0
Query: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
+ LLN C R+ RD RVHA +IK+ + T+++ RL+ YGKC C++ ARK+ D M
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 82 ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
E+N+ SW +MIS + Q G EAL FA+
Sbjct: 115 EKNV-------------------------------VSWTAMISRYSQTGHSSEALTVFAE 174
Query: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201
M NE++F + L++C L LG QIH L+ + NY S +++GS+L+DMY+K G+
Sbjct: 175 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 234
Query: 202 VEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSA 261
++ A+ +F+ + R VS ++I Y Q G +EAL++F + G+ P+ VT AS+++A
Sbjct: 235 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 294
Query: 262 CATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVS 321
+ ++ + G+Q H V++ E +L N+L+DMY+KC ++ AR +FD MP R+ +S
Sbjct: 295 LSGLALLDHGKQAHCHVLR-RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 354
Query: 322 ETSMVSGYAK----ASKVKVARYMFSNMMVK-DVITWNALIAGCTQNGENEEALILF 374
+M+ GY+K +++ R M VK D +T A+++GC+ + L +F
Sbjct: 355 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIF 379
BLAST of CsaV3_UNG170340 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 206.1 bits (523), Expect = 7.1e-52
Identity = 113/365 (30.96%), Postives = 205/365 (56.16%), Query Frame = 0
Query: 15 LFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVAR 74
L +S F +L CA+S++ ++ ++H ++K + ++ LI +Y + G ++ A
Sbjct: 130 LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAH 189
Query: 75 KLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 134
K+FD+ R++ S+ ++I + G++++A +F+++P D SWN+MISG+ + G + E
Sbjct: 190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKE 249
Query: 135 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 194
AL F M +E + + +SACA ++LG Q+H + + S++ + +AL+D
Sbjct: 250 ALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALID 309
Query: 195 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 254
+YSKCG +E A +F+ + + +SWN+LI Y EAL +F EM++ G P++VT
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 255 LASVVSACATISAIKEGQQIHARVVK-CDEFRNDLILGNALLDMYAKCNRINEARIIFDM 314
+ S++ ACA + AI G+ IH + K N L +L+DMYAKC I A +F+
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 315 MPIRSVVSETSMVSGYAKASKVKVARYMFSNM----MVKDVITWNALIAGCTQNGENEEA 374
+ +S+ S +M+ G+A + + +FS M + D IT+ L++ C+ +G +
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
BLAST of CsaV3_UNG170340 vs. ExPASy TrEMBL
Match:
A0A0A0KJ63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003610 PE=4 SV=1)
HSP 1 Score: 756.9 bits (1953), Expect = 4.0e-215
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
Query: 361 TQNGENEEALILFRL 376
TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375
BLAST of CsaV3_UNG170340 vs. ExPASy TrEMBL
Match:
A0A5A7VCZ2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00590 PE=4 SV=1)
HSP 1 Score: 739.6 bits (1908), Expect = 6.6e-210
Identity = 367/375 (97.87%), Postives = 369/375 (98.40%), Query Frame = 0
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MA NGLVKHLKGD LFLDSSPFSKLLNQC RSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1 MARNGLVKHLKGDFLFLDSSPFSKLLNQCVRSRSARDTSRVHACIIKSPFASETFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP+VDQCSWN
Sbjct: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPEVDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQHGRF EALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFYEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSDVYMGSALVDMYSKCGRVEYAQS FDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSAFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMI+CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR MFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARSMFSNMMVKDVITWNALIAGC 360
Query: 361 TQNGENEEALILFRL 376
TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375
BLAST of CsaV3_UNG170340 vs. ExPASy TrEMBL
Match:
A0A1S3CNR0 (pentatricopeptide repeat-containing protein At2g13600 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502546 PE=4 SV=1)
HSP 1 Score: 739.6 bits (1908), Expect = 6.6e-210
Identity = 367/375 (97.87%), Postives = 369/375 (98.40%), Query Frame = 0
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MA NGLVKHLKGD LFLDSSPFSKLLNQC RSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1 MARNGLVKHLKGDFLFLDSSPFSKLLNQCVRSRSARDTSRVHACIIKSPFASETFIQNRL 60
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP+VDQCSWN
Sbjct: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPEVDQCSWN 120
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQHGRF EALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFYEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSDVYMGSALVDMYSKCGRVEYAQS FDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSAFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMI+CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR MFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARSMFSNMMVKDVITWNALIAGC 360
Query: 361 TQNGENEEALILFRL 376
TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375
BLAST of CsaV3_UNG170340 vs. ExPASy TrEMBL
Match:
A0A6J1EB52 (pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita moschata OX=3662 GN=LOC111430973 PE=4 SV=1)
HSP 1 Score: 706.1 bits (1821), Expect = 8.1e-200
Identity = 345/375 (92.00%), Postives = 358/375 (95.47%), Query Frame = 0
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MAGNG ++ L GDLLFLDSSP SKLLNQCARS+SARDTSRVHACIIKSPFASE FIQNRL
Sbjct: 3 MAGNGFIRRLTGDLLFLDSSPLSKLLNQCARSKSARDTSRVHACIIKSPFASEVFIQNRL 62
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCVDVARK+FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 63 IDVYGKCGCVDVARKVFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 122
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQH RFDEAL YF QMHGHGF +NEYSFGSALSACAGLQDLK+GSQIHSL+YRS
Sbjct: 123 SMISGFEQHDRFDEALKYFVQMHGHGFFMNEYSFGSALSACAGLQDLKMGSQIHSLIYRS 182
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSD+YMGSALVDMYSKCGRV+ A+SVFD MTVRSRVSWNSLITCYEQNGPVDEAL IF
Sbjct: 183 NYLSDMYMGSALVDMYSKCGRVDCARSVFDGMTVRSRVSWNSLITCYEQNGPVDEALSIF 242
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMI+CGVEPDEVTLASVVSACAT+SAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 243 VEMIECGVEPDEVTLASVVSACATVSAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 302
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRINEARI+FD MPIRSVVSETSMVSGYAKAS VK AR MFSNMMVKDVITWNALIAGC
Sbjct: 303 CNRINEARIVFDRMPIRSVVSETSMVSGYAKASSVKAARSMFSNMMVKDVITWNALIAGC 362
Query: 361 TQNGENEEALILFRL 376
TQNGENEEAL LFRL
Sbjct: 363 TQNGENEEALALFRL 377
BLAST of CsaV3_UNG170340 vs. ExPASy TrEMBL
Match:
A0A6J1HNH1 (pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita maxima OX=3661 GN=LOC111465245 PE=4 SV=1)
HSP 1 Score: 701.8 bits (1810), Expect = 1.5e-198
Identity = 345/375 (92.00%), Postives = 356/375 (94.93%), Query Frame = 0
Query: 1 MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
MAGNG VK L GDLLFLDSSP SKLLNQCARS+SARDTSRVHACIIKSPFASE FIQNRL
Sbjct: 3 MAGNGFVKRLTGDLLFLDSSPLSKLLNQCARSKSARDTSRVHACIIKSPFASEVFIQNRL 62
Query: 61 IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
IDVYGKCGCV VARK+FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 63 IDVYGKCGCVGVARKVFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 122
Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
SMISGFEQH FDEAL YF QMHGHGF +NEYSFGSALSACAGLQDLK+GSQIHSL+YRS
Sbjct: 123 SMISGFEQHDCFDEALKYFVQMHGHGFFMNEYSFGSALSACAGLQDLKMGSQIHSLIYRS 182
Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
NYLSD+YMGSALVDMYSKCGRV+ A+SVFD MTVRSRVSWNSLITCYEQNGPVDEAL IF
Sbjct: 183 NYLSDMYMGSALVDMYSKCGRVDCARSVFDGMTVRSRVSWNSLITCYEQNGPVDEALSIF 242
Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
VEMI+CGVEPDEVTLASVVSACAT+SAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 243 VEMIECGVEPDEVTLASVVSACATVSAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 302
Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
CNRINEARI+FD MPIRSVVSETSMVSGYAKAS VK AR MFSNMMVKDVITWNALIAGC
Sbjct: 303 CNRINEARIVFDRMPIRSVVSETSMVSGYAKASSVKAARSMFSNMMVKDVITWNALIAGC 362
Query: 361 TQNGENEEALILFRL 376
TQNGENEEAL LFRL
Sbjct: 363 TQNGENEEALTLFRL 377
BLAST of CsaV3_UNG170340 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 473.4 bits (1217), Expect = 1.7e-133
Identity = 229/361 (63.43%), Postives = 285/361 (78.95%), Query Frame = 0
Query: 16 FLDSSPFSKLLNQCARSR-SARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVAR 75
F DSSPF+KLL+ C +S+ SA VHA +IKS F++E FIQNRLID Y KCG ++ R
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 76 KLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 135
++FD+M +RNI++WNS++ TK GFLD+A +F MP+ DQC+WNSM+SGF QH R +E
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 136 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 195
AL YFA MH GF++NEYSF S LSAC+GL D+ G Q+HSL+ +S +LSDVY+GSALVD
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195
Query: 196 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 255
MYSKCG V AQ VFDEM R+ VSWNSLITC+EQNGP EAL +F M++ VEPDEVT
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 256 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 315
LASV+SACA++SAIK GQ++H RVVK D+ RND+IL NA +DMYAKC+RI EAR IFD M
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 316 PIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 375
PIR+V++ETSM+SGYA A+ K AR MF+ M ++V++WNALIAG TQNGENEEAL LF
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
BLAST of CsaV3_UNG170340 vs. TAIR 10
Match:
AT1G68930.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 235.7 bits (600), Expect = 5.9e-62
Identity = 118/340 (34.71%), Postives = 199/340 (58.53%), Query Frame = 0
Query: 40 RVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSG 99
++H +IK F S + + L+ +Y GC+ A+K+F + +RN +NS++ G
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219
Query: 100 FLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALS 159
++DA+ +F M + D SW +MI G Q+G EA+ F +M G +++Y FGS L
Sbjct: 220 MIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 279
Query: 160 ACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVS 219
AC GL + G QIH+ + R+N+ +Y+GSAL+DMY KC + YA++VFD M ++ VS
Sbjct: 280 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 339
Query: 220 WNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVV 279
W +++ Y Q G +EA+KIF++M + G++PD TL +SACA +S+++EG Q H + +
Sbjct: 340 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 399
Query: 280 KCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR 339
+ + + N+L+ +Y KC I+++ +F+ M +R VS T+MVS YA+ +
Sbjct: 400 -TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 459
Query: 340 YMFSNM----MVKDVITWNALIAGCTQNGENEEALILFRL 376
+F M + D +T +I+ C++ G E+ F+L
Sbjct: 460 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497
BLAST of CsaV3_UNG170340 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 211.1 bits (536), Expect = 1.6e-54
Identity = 118/356 (33.15%), Postives = 195/356 (54.78%), Query Frame = 0
Query: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
D F L+ CA+SR+ + ++H I+K +A + F+QN L+ Y +CG +D ARK+F
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192
Query: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
D M ERN+ SW S+IC + + F DAV +F +M + ++ + NS+
Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV--------------- 252
Query: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
+ +SACA L+DL+ G ++++ + S + M SALVDMY
Sbjct: 253 ---------------TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 312
Query: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
KC ++ A+ +FDE + N++ + Y + G EAL +F M+ GV PD +++ S
Sbjct: 313 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 372
Query: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
+S+C+ + I G+ H V++ + F + + NAL+DMY KC+R + A IFD M +
Sbjct: 373 AISSCSQLRNILWGKSCHGYVLR-NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 432
Query: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILF 374
+VV+ S+V+GY + +V A F M K++++WN +I+G Q EEA+ +F
Sbjct: 433 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
BLAST of CsaV3_UNG170340 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 211.1 bits (536), Expect = 1.6e-54
Identity = 118/356 (33.15%), Postives = 195/356 (54.78%), Query Frame = 0
Query: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
D F L+ CA+SR+ + ++H I+K +A + F+QN L+ Y +CG +D ARK+F
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192
Query: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
D M ERN+ SW S+IC + + F DAV +F +M + ++ + NS+
Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV--------------- 252
Query: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
+ +SACA L+DL+ G ++++ + S + M SALVDMY
Sbjct: 253 ---------------TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 312
Query: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
KC ++ A+ +FDE + N++ + Y + G EAL +F M+ GV PD +++ S
Sbjct: 313 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 372
Query: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
+S+C+ + I G+ H V++ + F + + NAL+DMY KC+R + A IFD M +
Sbjct: 373 AISSCSQLRNILWGKSCHGYVLR-NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 432
Query: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILF 374
+VV+ S+V+GY + +V A F M K++++WN +I+G Q EEA+ +F
Sbjct: 433 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
BLAST of CsaV3_UNG170340 vs. TAIR 10
Match:
AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 208.4 bits (529), Expect = 1.0e-53
Identity = 120/357 (33.61%), Postives = 197/357 (55.18%), Query Frame = 0
Query: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
+ LLN C R+ RD RVHA +IK+ + T+++ RL+ YGKC C++ ARK+ D M
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 82 ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
E+N+ SW +MIS + Q G EAL FA+
Sbjct: 115 EKNV-------------------------------VSWTAMISRYSQTGHSSEALTVFAE 174
Query: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201
M NE++F + L++C L LG QIH L+ + NY S +++GS+L+DMY+K G+
Sbjct: 175 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 234
Query: 202 VEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSA 261
++ A+ +F+ + R VS ++I Y Q G +EAL++F + G+ P+ VT AS+++A
Sbjct: 235 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 294
Query: 262 CATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVS 321
+ ++ + G+Q H V++ E +L N+L+DMY+KC ++ AR +FD MP R+ +S
Sbjct: 295 LSGLALLDHGKQAHCHVLR-RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 354
Query: 322 ETSMVSGYAK----ASKVKVARYMFSNMMVK-DVITWNALIAGCTQNGENEEALILF 374
+M+ GY+K +++ R M VK D +T A+++GC+ + L +F
Sbjct: 355 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIF 379
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_031742312.1 | 8.2e-215 | 100.00 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600-like ... | [more] |
XP_004149135.2 | 8.2e-215 | 100.00 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600 [Cucu... | [more] |
KAE8637288.1 | 8.2e-215 | 100.00 | hypothetical protein CSA_004540, partial [Cucumis sativus] | [more] |
XP_008464730.1 | 1.4e-209 | 97.87 | PREDICTED: pentatricopeptide repeat-containing protein At2g13600 isoform X1 [Cuc... | [more] |
XP_038891428.1 | 7.2e-203 | 93.87 | pentatricopeptide repeat-containing protein At2g13600-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q9SIT7 | 2.4e-132 | 63.43 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
Q9CAA8 | 8.4e-61 | 34.71 | Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis th... | [more] |
Q9LUJ2 | 2.2e-53 | 33.15 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Q9LIC3 | 1.4e-52 | 33.61 | Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... | [more] |
Q9LN01 | 7.1e-52 | 30.96 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KJ63 | 4.0e-215 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003610 PE=4 SV=1 | [more] |
A0A5A7VCZ2 | 6.6e-210 | 97.87 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CNR0 | 6.6e-210 | 97.87 | pentatricopeptide repeat-containing protein At2g13600 isoform X1 OS=Cucumis melo... | [more] |
A0A6J1EB52 | 8.1e-200 | 92.00 | pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1HNH1 | 1.5e-198 | 92.00 | pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita maxima OX=366... | [more] |
Match Name | E-value | Identity | Description | |
AT2G13600.1 | 1.7e-133 | 63.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G68930.1 | 5.9e-62 | 34.71 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT3G22690.1 | 1.6e-54 | 33.15 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
AT3G22690.2 | 1.6e-54 | 33.15 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |
AT3G13770.1 | 1.0e-53 | 33.61 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |