CsaV3_UNG170340 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_UNG170340
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold77: 152976 .. 154396 (-)
RNA-Seq ExpressionCsaV3_UNG170340
SyntenyCsaV3_UNG170340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTCAGAGACAGCAGCGGCTCTGGTATGTAGAGGCGGCGGTGAATGGTAAAAGTGACGTAACAAATTATTTTTCTTAAGCTTCTGATACCATGTCTAGTTCTGTATATTATTGAAGATAATTGTCTATTCACAATGGGAATTACAAAAGTGTATTGTATACATAAAGGAGATTACAAGAAAGAAAATATAAATTAGCCTAAAAGGAAGAGTAAACTGGCTGTTTAATAGCACAACATTCTGGCAATAGATTTGATAAGAGCATGCCTATGAGCCTATTCTTTTTTAGGATTATGGAATGGCTGGTAATGGATTGGTTAAACATCTCAAGGGTGACCTTTTATTCCTTGATTCATCGCCTTTTTCCAAGCTCTTGAACCAGTGTGCTCGCTCGAGGTCAGCTCGAGACACCAGTCGTGTACATGCTTGTATAATTAAATCACCTTTTGCGTCCGAAACTTTTATCCAAAATAGGCTCATTGATGTATATGGGAAATGTGGATGTGTGGATGTTGCTCGCAAGTTGTTTGATAGAATGCTTGAGAGAAATATTTTCTCTTGGAACTCTATCATTTGTGCATTCACTAAGTCCGGATTTCTTGATGATGCTGTCCACATCTTTGAGAAGATGCCTCAAGTTGACCAATGCTCGTGGAACTCTATGATTTCAGGTTTTGAACAACATGGTCGCTTCGATGAAGCTTTAGTTTATTTTGCTCAAATGCATGGCCATGGTTTTCTTGTGAATGAATATTCATTCGGTAGTGCTCTCAGTGCTTGTGCAGGTTTACAAGATTTGAAATTAGGTTCCCAAATCCACAGTTTAGTATATAGGTCAAACTATTTATCAGATGTGTATATGGGCTCTGCGCTAGTAGATATGTACTCTAAATGTGGAAGAGTTGAATATGCTCAAAGTGTTTTTGATGAAATGACTGTGAGAAGTAGAGTTTCTTGGAATAGCTTGATTACCTGTTATGAACAGAATGGTCCAGTTGATGAGGCTCTTAAGATTTTTGTTGAGATGATCAAATGTGGGGTTGAACCTGACGAGGTAACACTTGCAAGTGTTGTTAGTGCATGTGCAACTATCTCGGCAATCAAAGAAGGTCAGCAGATTCATGCTCGAGTTGTAAAGTGTGATGAATTTAGAAATGATCTTATTTTAGGAAATGCGTTGCTTGATATGTATGCTAAATGTAATAGGATTAACGAGGCTAGAATAATTTTTGATATGATGCCAATTAGGAGTGTGGTGTCTGAGACCTCAATGGTAAGTGGGTATGCAAAGGCATCCAAAGTTAAAGTTGCAAGATATATGTTCTCAAATATGATGGTGAAAGATGTAATTACTTGGAATGCGCTTATTGCAGGGTGTACTCAGAATGGAGAGAATGAAGAGGCACTTATACTCTTTCGTTTG

mRNA sequence

ATGGCTGGTAATGGATTGGTTAAACATCTCAAGGGTGACCTTTTATTCCTTGATTCATCGCCTTTTTCCAAGCTCTTGAACCAGTGTGCTCGCTCGAGGTCAGCTCGAGACACCAGTCGTGTACATGCTTGTATAATTAAATCACCTTTTGCGTCCGAAACTTTTATCCAAAATAGGCTCATTGATGTATATGGGAAATGTGGATGTGTGGATGTTGCTCGCAAGTTGTTTGATAGAATGCTTGAGAGAAATATTTTCTCTTGGAACTCTATCATTTGTGCATTCACTAAGTCCGGATTTCTTGATGATGCTGTCCACATCTTTGAGAAGATGCCTCAAGTTGACCAATGCTCGTGGAACTCTATGATTTCAGGTTTTGAACAACATGGTCGCTTCGATGAAGCTTTAGTTTATTTTGCTCAAATGCATGGCCATGGTTTTCTTGTGAATGAATATTCATTCGGTAGTGCTCTCAGTGCTTGTGCAGGTTTACAAGATTTGAAATTAGGTTCCCAAATCCACAGTTTAGTATATAGGTCAAACTATTTATCAGATGTGTATATGGGCTCTGCGCTAGTAGATATGTACTCTAAATGTGGAAGAGTTGAATATGCTCAAAGTGTTTTTGATGAAATGACTGTGAGAAGTAGAGTTTCTTGGAATAGCTTGATTACCTGTTATGAACAGAATGGTCCAGTTGATGAGGCTCTTAAGATTTTTGTTGAGATGATCAAATGTGGGGTTGAACCTGACGAGGTAACACTTGCAAGTGTTGTTAGTGCATGTGCAACTATCTCGGCAATCAAAGAAGGTCAGCAGATTCATGCTCGAGTTGTAAAGTGTGATGAATTTAGAAATGATCTTATTTTAGGAAATGCGTTGCTTGATATGTATGCTAAATGTAATAGGATTAACGAGGCTAGAATAATTTTTGATATGATGCCAATTAGGAGTGTGGTGTCTGAGACCTCAATGGTAAGTGGGTATGCAAAGGCATCCAAAGTTAAAGTTGCAAGATATATGTTCTCAAATATGATGGTGAAAGATGTAATTACTTGGAATGCGCTTATTGCAGGGTGTACTCAGAATGGAGAGAATGAAGAGGCACTTATACTCTTTCGTTTG

Coding sequence (CDS)

ATGGCTGGTAATGGATTGGTTAAACATCTCAAGGGTGACCTTTTATTCCTTGATTCATCGCCTTTTTCCAAGCTCTTGAACCAGTGTGCTCGCTCGAGGTCAGCTCGAGACACCAGTCGTGTACATGCTTGTATAATTAAATCACCTTTTGCGTCCGAAACTTTTATCCAAAATAGGCTCATTGATGTATATGGGAAATGTGGATGTGTGGATGTTGCTCGCAAGTTGTTTGATAGAATGCTTGAGAGAAATATTTTCTCTTGGAACTCTATCATTTGTGCATTCACTAAGTCCGGATTTCTTGATGATGCTGTCCACATCTTTGAGAAGATGCCTCAAGTTGACCAATGCTCGTGGAACTCTATGATTTCAGGTTTTGAACAACATGGTCGCTTCGATGAAGCTTTAGTTTATTTTGCTCAAATGCATGGCCATGGTTTTCTTGTGAATGAATATTCATTCGGTAGTGCTCTCAGTGCTTGTGCAGGTTTACAAGATTTGAAATTAGGTTCCCAAATCCACAGTTTAGTATATAGGTCAAACTATTTATCAGATGTGTATATGGGCTCTGCGCTAGTAGATATGTACTCTAAATGTGGAAGAGTTGAATATGCTCAAAGTGTTTTTGATGAAATGACTGTGAGAAGTAGAGTTTCTTGGAATAGCTTGATTACCTGTTATGAACAGAATGGTCCAGTTGATGAGGCTCTTAAGATTTTTGTTGAGATGATCAAATGTGGGGTTGAACCTGACGAGGTAACACTTGCAAGTGTTGTTAGTGCATGTGCAACTATCTCGGCAATCAAAGAAGGTCAGCAGATTCATGCTCGAGTTGTAAAGTGTGATGAATTTAGAAATGATCTTATTTTAGGAAATGCGTTGCTTGATATGTATGCTAAATGTAATAGGATTAACGAGGCTAGAATAATTTTTGATATGATGCCAATTAGGAGTGTGGTGTCTGAGACCTCAATGGTAAGTGGGTATGCAAAGGCATCCAAAGTTAAAGTTGCAAGATATATGTTCTCAAATATGATGGTGAAAGATGTAATTACTTGGAATGCGCTTATTGCAGGGTGTACTCAGAATGGAGAGAATGAAGAGGCACTTATACTCTTTCGTTTG

Protein sequence

MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRL
Homology
BLAST of CsaV3_UNG170340 vs. NCBI nr
Match: XP_031742312.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis sativus])

HSP 1 Score: 756.9 bits (1953), Expect = 8.2e-215
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0

Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
           MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120

Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
           SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALILFRL 376
           TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375

BLAST of CsaV3_UNG170340 vs. NCBI nr
Match: XP_004149135.2 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600 [Cucumis sativus])

HSP 1 Score: 756.9 bits (1953), Expect = 8.2e-215
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0

Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
           MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120

Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
           SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALILFRL 376
           TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375

BLAST of CsaV3_UNG170340 vs. NCBI nr
Match: KAE8637288.1 (hypothetical protein CSA_004540, partial [Cucumis sativus])

HSP 1 Score: 756.9 bits (1953), Expect = 8.2e-215
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0

Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
           MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120

Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
           SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALILFRL 376
           TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375

BLAST of CsaV3_UNG170340 vs. NCBI nr
Match: XP_008464730.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600 isoform X1 [Cucumis melo] >KAA0065508.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08748.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 739.6 bits (1908), Expect = 1.4e-209
Identity = 367/375 (97.87%), Postives = 369/375 (98.40%), Query Frame = 0

Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
           MA NGLVKHLKGD LFLDSSPFSKLLNQC RSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MARNGLVKHLKGDFLFLDSSPFSKLLNQCVRSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP+VDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPEVDQCSWN 120

Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
           SMISGFEQHGRF EALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFYEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRVEYAQS FDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSAFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMI+CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR MFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARSMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALILFRL 376
           TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375

BLAST of CsaV3_UNG170340 vs. NCBI nr
Match: XP_038891428.1 (pentatricopeptide repeat-containing protein At2g13600-like [Benincasa hispida])

HSP 1 Score: 717.2 bits (1850), Expect = 7.2e-203
Identity = 352/375 (93.87%), Postives = 366/375 (97.60%), Query Frame = 0

Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
           MAGNGLVKHL+G+L FLDSSPFSKLLNQCAR +S RDTSRVHA IIKSPFASETFIQNRL
Sbjct: 1   MAGNGLVKHLRGELPFLDSSPFSKLLNQCARLKSVRDTSRVHARIIKSPFASETFIQNRL 60

Query: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           IDVYGKCGCVDVARKLFDR+LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRLLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120

Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
           SMISGFEQH  F EAL+YF QMHG GF++NEYSFGSALSACAGLQDLKLGSQIHSL+YRS
Sbjct: 121 SMISGFEQHDCFGEALIYFTQMHGQGFVMNEYSFGSALSACAGLQDLKLGSQIHSLIYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRV+YAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVDYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMI+CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRI+EARI+FD+MPIRSVVSETSMVSGYAKAS+VKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRISEARIVFDLMPIRSVVSETSMVSGYAKASRVKVARYMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALILFRL 376
           TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375

BLAST of CsaV3_UNG170340 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 2.4e-132
Identity = 229/361 (63.43%), Postives = 285/361 (78.95%), Query Frame = 0

Query: 16  FLDSSPFSKLLNQCARSR-SARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVAR 75
           F DSSPF+KLL+ C +S+ SA     VHA +IKS F++E FIQNRLID Y KCG ++  R
Sbjct: 16  FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75

Query: 76  KLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 135
           ++FD+M +RNI++WNS++   TK GFLD+A  +F  MP+ DQC+WNSM+SGF QH R +E
Sbjct: 76  QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135

Query: 136 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 195
           AL YFA MH  GF++NEYSF S LSAC+GL D+  G Q+HSL+ +S +LSDVY+GSALVD
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195

Query: 196 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 255
           MYSKCG V  AQ VFDEM  R+ VSWNSLITC+EQNGP  EAL +F  M++  VEPDEVT
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255

Query: 256 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 315
           LASV+SACA++SAIK GQ++H RVVK D+ RND+IL NA +DMYAKC+RI EAR IFD M
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315

Query: 316 PIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 375
           PIR+V++ETSM+SGYA A+  K AR MF+ M  ++V++WNALIAG TQNGENEEAL LF 
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375

BLAST of CsaV3_UNG170340 vs. ExPASy Swiss-Prot
Match: Q9CAA8 (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 8.4e-61
Identity = 118/340 (34.71%), Postives = 199/340 (58.53%), Query Frame = 0

Query: 40  RVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSG 99
           ++H  +IK  F S   + + L+ +Y   GC+  A+K+F  + +RN   +NS++      G
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219

Query: 100 FLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALS 159
            ++DA+ +F  M + D  SW +MI G  Q+G   EA+  F +M   G  +++Y FGS L 
Sbjct: 220 MIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 279

Query: 160 ACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVS 219
           AC GL  +  G QIH+ + R+N+   +Y+GSAL+DMY KC  + YA++VFD M  ++ VS
Sbjct: 280 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 339

Query: 220 WNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVV 279
           W +++  Y Q G  +EA+KIF++M + G++PD  TL   +SACA +S+++EG Q H + +
Sbjct: 340 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 399

Query: 280 KCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR 339
                 + + + N+L+ +Y KC  I+++  +F+ M +R  VS T+MVS YA+  +     
Sbjct: 400 -TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 459

Query: 340 YMFSNM----MVKDVITWNALIAGCTQNGENEEALILFRL 376
            +F  M    +  D +T   +I+ C++ G  E+    F+L
Sbjct: 460 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497

BLAST of CsaV3_UNG170340 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.2e-53
Identity = 118/356 (33.15%), Postives = 195/356 (54.78%), Query Frame = 0

Query: 18  DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
           D   F   L+ CA+SR+  +  ++H  I+K  +A + F+QN L+  Y +CG +D ARK+F
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192

Query: 78  DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
           D M ERN+ SW S+IC + +  F  DAV +F +M + ++ + NS+               
Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV--------------- 252

Query: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
                          +    +SACA L+DL+ G ++++ +  S    +  M SALVDMY 
Sbjct: 253 ---------------TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 312

Query: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
           KC  ++ A+ +FDE    +    N++ + Y + G   EAL +F  M+  GV PD +++ S
Sbjct: 313 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 372

Query: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
            +S+C+ +  I  G+  H  V++ + F +   + NAL+DMY KC+R + A  IFD M  +
Sbjct: 373 AISSCSQLRNILWGKSCHGYVLR-NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 432

Query: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILF 374
           +VV+  S+V+GY +  +V  A   F  M  K++++WN +I+G  Q    EEA+ +F
Sbjct: 433 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

BLAST of CsaV3_UNG170340 vs. ExPASy Swiss-Prot
Match: Q9LIC3 (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-52
Identity = 120/357 (33.61%), Postives = 197/357 (55.18%), Query Frame = 0

Query: 22  FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
           +  LLN C   R+ RD  RVHA +IK+ +   T+++ RL+  YGKC C++ ARK+ D M 
Sbjct: 55  YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114

Query: 82  ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
           E+N+                                SW +MIS + Q G   EAL  FA+
Sbjct: 115 EKNV-------------------------------VSWTAMISRYSQTGHSSEALTVFAE 174

Query: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201
           M       NE++F + L++C     L LG QIH L+ + NY S +++GS+L+DMY+K G+
Sbjct: 175 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 234

Query: 202 VEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSA 261
           ++ A+ +F+ +  R  VS  ++I  Y Q G  +EAL++F  +   G+ P+ VT AS+++A
Sbjct: 235 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 294

Query: 262 CATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVS 321
            + ++ +  G+Q H  V++  E     +L N+L+DMY+KC  ++ AR +FD MP R+ +S
Sbjct: 295 LSGLALLDHGKQAHCHVLR-RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 354

Query: 322 ETSMVSGYAK----ASKVKVARYMFSNMMVK-DVITWNALIAGCTQNGENEEALILF 374
             +M+ GY+K       +++ R M     VK D +T  A+++GC+     +  L +F
Sbjct: 355 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIF 379

BLAST of CsaV3_UNG170340 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.1e-52
Identity = 113/365 (30.96%), Postives = 205/365 (56.16%), Query Frame = 0

Query: 15  LFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVAR 74
           L  +S  F  +L  CA+S++ ++  ++H  ++K     + ++   LI +Y + G ++ A 
Sbjct: 130 LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAH 189

Query: 75  KLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 134
           K+FD+   R++ S+ ++I  +   G++++A  +F+++P  D  SWN+MISG+ + G + E
Sbjct: 190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKE 249

Query: 135 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 194
           AL  F  M       +E +  + +SACA    ++LG Q+H  +    + S++ + +AL+D
Sbjct: 250 ALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALID 309

Query: 195 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 254
           +YSKCG +E A  +F+ +  +  +SWN+LI  Y       EAL +F EM++ G  P++VT
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369

Query: 255 LASVVSACATISAIKEGQQIHARVVK-CDEFRNDLILGNALLDMYAKCNRINEARIIFDM 314
           + S++ ACA + AI  G+ IH  + K      N   L  +L+DMYAKC  I  A  +F+ 
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429

Query: 315 MPIRSVVSETSMVSGYAKASKVKVARYMFSNM----MVKDVITWNALIAGCTQNGENEEA 374
           +  +S+ S  +M+ G+A   +   +  +FS M    +  D IT+  L++ C+ +G  +  
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489

BLAST of CsaV3_UNG170340 vs. ExPASy TrEMBL
Match: A0A0A0KJ63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003610 PE=4 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 4.0e-215
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0

Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
           MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120

Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
           SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALILFRL 376
           TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375

BLAST of CsaV3_UNG170340 vs. ExPASy TrEMBL
Match: A0A5A7VCZ2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00590 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 6.6e-210
Identity = 367/375 (97.87%), Postives = 369/375 (98.40%), Query Frame = 0

Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
           MA NGLVKHLKGD LFLDSSPFSKLLNQC RSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MARNGLVKHLKGDFLFLDSSPFSKLLNQCVRSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP+VDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPEVDQCSWN 120

Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
           SMISGFEQHGRF EALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFYEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRVEYAQS FDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSAFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMI+CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR MFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARSMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALILFRL 376
           TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375

BLAST of CsaV3_UNG170340 vs. ExPASy TrEMBL
Match: A0A1S3CNR0 (pentatricopeptide repeat-containing protein At2g13600 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502546 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 6.6e-210
Identity = 367/375 (97.87%), Postives = 369/375 (98.40%), Query Frame = 0

Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
           MA NGLVKHLKGD LFLDSSPFSKLLNQC RSRSARDTSRVHACIIKSPFASETFIQNRL
Sbjct: 1   MARNGLVKHLKGDFLFLDSSPFSKLLNQCVRSRSARDTSRVHACIIKSPFASETFIQNRL 60

Query: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMP+VDQCSWN
Sbjct: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPEVDQCSWN 120

Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
           SMISGFEQHGRF EALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS
Sbjct: 121 SMISGFEQHGRFYEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180

Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSDVYMGSALVDMYSKCGRVEYAQS FDEMTVRSRVSWNSLITCYEQNGPVDEALKIF
Sbjct: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSAFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240

Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMI+CGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 241 VEMIECGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR MFSNMMVKDVITWNALIAGC
Sbjct: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARSMFSNMMVKDVITWNALIAGC 360

Query: 361 TQNGENEEALILFRL 376
           TQNGENEEALILFRL
Sbjct: 361 TQNGENEEALILFRL 375

BLAST of CsaV3_UNG170340 vs. ExPASy TrEMBL
Match: A0A6J1EB52 (pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita moschata OX=3662 GN=LOC111430973 PE=4 SV=1)

HSP 1 Score: 706.1 bits (1821), Expect = 8.1e-200
Identity = 345/375 (92.00%), Postives = 358/375 (95.47%), Query Frame = 0

Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
           MAGNG ++ L GDLLFLDSSP SKLLNQCARS+SARDTSRVHACIIKSPFASE FIQNRL
Sbjct: 3   MAGNGFIRRLTGDLLFLDSSPLSKLLNQCARSKSARDTSRVHACIIKSPFASEVFIQNRL 62

Query: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           IDVYGKCGCVDVARK+FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 63  IDVYGKCGCVDVARKVFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 122

Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
           SMISGFEQH RFDEAL YF QMHGHGF +NEYSFGSALSACAGLQDLK+GSQIHSL+YRS
Sbjct: 123 SMISGFEQHDRFDEALKYFVQMHGHGFFMNEYSFGSALSACAGLQDLKMGSQIHSLIYRS 182

Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSD+YMGSALVDMYSKCGRV+ A+SVFD MTVRSRVSWNSLITCYEQNGPVDEAL IF
Sbjct: 183 NYLSDMYMGSALVDMYSKCGRVDCARSVFDGMTVRSRVSWNSLITCYEQNGPVDEALSIF 242

Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMI+CGVEPDEVTLASVVSACAT+SAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 243 VEMIECGVEPDEVTLASVVSACATVSAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 302

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARI+FD MPIRSVVSETSMVSGYAKAS VK AR MFSNMMVKDVITWNALIAGC
Sbjct: 303 CNRINEARIVFDRMPIRSVVSETSMVSGYAKASSVKAARSMFSNMMVKDVITWNALIAGC 362

Query: 361 TQNGENEEALILFRL 376
           TQNGENEEAL LFRL
Sbjct: 363 TQNGENEEALALFRL 377

BLAST of CsaV3_UNG170340 vs. ExPASy TrEMBL
Match: A0A6J1HNH1 (pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita maxima OX=3661 GN=LOC111465245 PE=4 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 1.5e-198
Identity = 345/375 (92.00%), Postives = 356/375 (94.93%), Query Frame = 0

Query: 1   MAGNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRL 60
           MAGNG VK L GDLLFLDSSP SKLLNQCARS+SARDTSRVHACIIKSPFASE FIQNRL
Sbjct: 3   MAGNGFVKRLTGDLLFLDSSPLSKLLNQCARSKSARDTSRVHACIIKSPFASEVFIQNRL 62

Query: 61  IDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 120
           IDVYGKCGCV VARK+FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN
Sbjct: 63  IDVYGKCGCVGVARKVFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWN 122

Query: 121 SMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS 180
           SMISGFEQH  FDEAL YF QMHGHGF +NEYSFGSALSACAGLQDLK+GSQIHSL+YRS
Sbjct: 123 SMISGFEQHDCFDEALKYFVQMHGHGFFMNEYSFGSALSACAGLQDLKMGSQIHSLIYRS 182

Query: 181 NYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIF 240
           NYLSD+YMGSALVDMYSKCGRV+ A+SVFD MTVRSRVSWNSLITCYEQNGPVDEAL IF
Sbjct: 183 NYLSDMYMGSALVDMYSKCGRVDCARSVFDGMTVRSRVSWNSLITCYEQNGPVDEALSIF 242

Query: 241 VEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 300
           VEMI+CGVEPDEVTLASVVSACAT+SAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK
Sbjct: 243 VEMIECGVEPDEVTLASVVSACATVSAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAK 302

Query: 301 CNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGC 360
           CNRINEARI+FD MPIRSVVSETSMVSGYAKAS VK AR MFSNMMVKDVITWNALIAGC
Sbjct: 303 CNRINEARIVFDRMPIRSVVSETSMVSGYAKASSVKAARSMFSNMMVKDVITWNALIAGC 362

Query: 361 TQNGENEEALILFRL 376
           TQNGENEEAL LFRL
Sbjct: 363 TQNGENEEALTLFRL 377

BLAST of CsaV3_UNG170340 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 473.4 bits (1217), Expect = 1.7e-133
Identity = 229/361 (63.43%), Postives = 285/361 (78.95%), Query Frame = 0

Query: 16  FLDSSPFSKLLNQCARSR-SARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVAR 75
           F DSSPF+KLL+ C +S+ SA     VHA +IKS F++E FIQNRLID Y KCG ++  R
Sbjct: 16  FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75

Query: 76  KLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDE 135
           ++FD+M +RNI++WNS++   TK GFLD+A  +F  MP+ DQC+WNSM+SGF QH R +E
Sbjct: 76  QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135

Query: 136 ALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVD 195
           AL YFA MH  GF++NEYSF S LSAC+GL D+  G Q+HSL+ +S +LSDVY+GSALVD
Sbjct: 136 ALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVD 195

Query: 196 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 255
           MYSKCG V  AQ VFDEM  R+ VSWNSLITC+EQNGP  EAL +F  M++  VEPDEVT
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255

Query: 256 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 315
           LASV+SACA++SAIK GQ++H RVVK D+ RND+IL NA +DMYAKC+RI EAR IFD M
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315

Query: 316 PIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 375
           PIR+V++ETSM+SGYA A+  K AR MF+ M  ++V++WNALIAG TQNGENEEAL LF 
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375

BLAST of CsaV3_UNG170340 vs. TAIR 10
Match: AT1G68930.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 235.7 bits (600), Expect = 5.9e-62
Identity = 118/340 (34.71%), Postives = 199/340 (58.53%), Query Frame = 0

Query: 40  RVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSG 99
           ++H  +IK  F S   + + L+ +Y   GC+  A+K+F  + +RN   +NS++      G
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219

Query: 100 FLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALS 159
            ++DA+ +F  M + D  SW +MI G  Q+G   EA+  F +M   G  +++Y FGS L 
Sbjct: 220 MIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 279

Query: 160 ACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVS 219
           AC GL  +  G QIH+ + R+N+   +Y+GSAL+DMY KC  + YA++VFD M  ++ VS
Sbjct: 280 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 339

Query: 220 WNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVV 279
           W +++  Y Q G  +EA+KIF++M + G++PD  TL   +SACA +S+++EG Q H + +
Sbjct: 340 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 399

Query: 280 KCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR 339
                 + + + N+L+ +Y KC  I+++  +F+ M +R  VS T+MVS YA+  +     
Sbjct: 400 -TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 459

Query: 340 YMFSNM----MVKDVITWNALIAGCTQNGENEEALILFRL 376
            +F  M    +  D +T   +I+ C++ G  E+    F+L
Sbjct: 460 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497

BLAST of CsaV3_UNG170340 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-54
Identity = 118/356 (33.15%), Postives = 195/356 (54.78%), Query Frame = 0

Query: 18  DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
           D   F   L+ CA+SR+  +  ++H  I+K  +A + F+QN L+  Y +CG +D ARK+F
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192

Query: 78  DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
           D M ERN+ SW S+IC + +  F  DAV +F +M + ++ + NS+               
Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV--------------- 252

Query: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
                          +    +SACA L+DL+ G ++++ +  S    +  M SALVDMY 
Sbjct: 253 ---------------TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 312

Query: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
           KC  ++ A+ +FDE    +    N++ + Y + G   EAL +F  M+  GV PD +++ S
Sbjct: 313 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 372

Query: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
            +S+C+ +  I  G+  H  V++ + F +   + NAL+DMY KC+R + A  IFD M  +
Sbjct: 373 AISSCSQLRNILWGKSCHGYVLR-NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 432

Query: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILF 374
           +VV+  S+V+GY +  +V  A   F  M  K++++WN +I+G  Q    EEA+ +F
Sbjct: 433 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

BLAST of CsaV3_UNG170340 vs. TAIR 10
Match: AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-54
Identity = 118/356 (33.15%), Postives = 195/356 (54.78%), Query Frame = 0

Query: 18  DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
           D   F   L+ CA+SR+  +  ++H  I+K  +A + F+QN L+  Y +CG +D ARK+F
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192

Query: 78  DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
           D M ERN+ SW S+IC + +  F  DAV +F +M + ++ + NS+               
Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV--------------- 252

Query: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYS 197
                          +    +SACA L+DL+ G ++++ +  S    +  M SALVDMY 
Sbjct: 253 ---------------TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 312

Query: 198 KCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLAS 257
           KC  ++ A+ +FDE    +    N++ + Y + G   EAL +F  M+  GV PD +++ S
Sbjct: 313 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 372

Query: 258 VVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR 317
            +S+C+ +  I  G+  H  V++ + F +   + NAL+DMY KC+R + A  IFD M  +
Sbjct: 373 AISSCSQLRNILWGKSCHGYVLR-NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 432

Query: 318 SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILF 374
           +VV+  S+V+GY +  +V  A   F  M  K++++WN +I+G  Q    EEA+ +F
Sbjct: 433 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

BLAST of CsaV3_UNG170340 vs. TAIR 10
Match: AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 1.0e-53
Identity = 120/357 (33.61%), Postives = 197/357 (55.18%), Query Frame = 0

Query: 22  FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
           +  LLN C   R+ RD  RVHA +IK+ +   T+++ RL+  YGKC C++ ARK+ D M 
Sbjct: 55  YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114

Query: 82  ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
           E+N+                                SW +MIS + Q G   EAL  FA+
Sbjct: 115 EKNV-------------------------------VSWTAMISRYSQTGHSSEALTVFAE 174

Query: 142 MHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGR 201
           M       NE++F + L++C     L LG QIH L+ + NY S +++GS+L+DMY+K G+
Sbjct: 175 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 234

Query: 202 VEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSA 261
           ++ A+ +F+ +  R  VS  ++I  Y Q G  +EAL++F  +   G+ P+ VT AS+++A
Sbjct: 235 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 294

Query: 262 CATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVS 321
            + ++ +  G+Q H  V++  E     +L N+L+DMY+KC  ++ AR +FD MP R+ +S
Sbjct: 295 LSGLALLDHGKQAHCHVLR-RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 354

Query: 322 ETSMVSGYAK----ASKVKVARYMFSNMMVK-DVITWNALIAGCTQNGENEEALILF 374
             +M+ GY+K       +++ R M     VK D +T  A+++GC+     +  L +F
Sbjct: 355 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIF 379

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031742312.18.2e-215100.00LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600-like ... [more]
XP_004149135.28.2e-215100.00LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g13600 [Cucu... [more]
KAE8637288.18.2e-215100.00hypothetical protein CSA_004540, partial [Cucumis sativus][more]
XP_008464730.11.4e-20997.87PREDICTED: pentatricopeptide repeat-containing protein At2g13600 isoform X1 [Cuc... [more]
XP_038891428.17.2e-20393.87pentatricopeptide repeat-containing protein At2g13600-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q9SIT72.4e-13263.43Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
Q9CAA88.4e-6134.71Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis th... [more]
Q9LUJ22.2e-5333.15Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... [more]
Q9LIC31.4e-5233.61Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... [more]
Q9LN017.1e-5230.96Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0KJ634.0e-215100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G003610 PE=4 SV=1[more]
A0A5A7VCZ26.6e-21097.87Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CNR06.6e-21097.87pentatricopeptide repeat-containing protein At2g13600 isoform X1 OS=Cucumis melo... [more]
A0A6J1EB528.1e-20092.00pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita moschata OX=3... [more]
A0A6J1HNH11.5e-19892.00pentatricopeptide repeat-containing protein At2g13600 OS=Cucurbita maxima OX=366... [more]
Match NameE-valueIdentityDescription
AT2G13600.11.7e-13363.43Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G68930.15.9e-6234.71pentatricopeptide (PPR) repeat-containing protein [more]
AT3G22690.11.6e-5433.15CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... [more]
AT3G22690.21.6e-5433.15INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... [more]
AT3G13770.11.0e-5333.61Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 172..267
e-value: 1.1E-24
score: 88.7
coord: 268..370
e-value: 1.7E-18
score: 68.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 5..171
e-value: 1.9E-30
score: 108.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 63..245
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 115..162
e-value: 5.5E-8
score: 32.9
coord: 218..263
e-value: 6.5E-11
score: 42.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 58..85
e-value: 1.7E-5
score: 24.7
coord: 190..213
e-value: 9.6E-4
score: 19.2
coord: 323..349
e-value: 0.083
score: 13.2
coord: 292..315
e-value: 0.029
score: 14.6
coord: 86..112
e-value: 1.2E-5
score: 25.2
coord: 351..374
e-value: 1.6E-4
score: 21.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 58..85
e-value: 1.3E-5
score: 23.1
coord: 118..150
e-value: 1.3E-7
score: 29.3
coord: 218..252
e-value: 4.2E-9
score: 34.0
coord: 86..111
e-value: 7.0E-5
score: 20.7
coord: 323..349
e-value: 0.0014
score: 16.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 115..149
score: 11.038087
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 349..375
score: 9.306201
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 216..250
score: 12.58363
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 84..114
score: 9.755614
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 17..113
coord: 96..262
coord: 216..335
coord: 323..374

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG170340.1CsaV3_UNG170340.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding