CsaV3_UNG160200 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_UNG160200
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Tubulin-folding cofactor C
Location	scaffold66: 377202 .. 378272 (+)
RNA-Seq Expression	CsaV3_UNG160200
Synteny	CsaV3_UNG160200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGCTGATGAACCTTCGTCGATCCCTAATTCTATTCCTTCAGATCCTTCAGACGCGAATCTCCAAAAGAAGCATGCTTCAGTCATCGAACGCCTAGCCAATCGCAATCAAACTCGCTTAGAGAATTCCATAACTCGCAGATCGGAATCCGATTCCTCTACCTCTTCCACTTCTTCCTTTCTCGACCGCTTTTCCGACTCCAAGCGCGCCATCGAGTCGGCACTCGCCCAATGCCGCCTCACACCGCCGGACCCCGCTCAACTCAGATCTCACCTCGATGGGATATCCACCTCAATCTCCGACCTCGAGAAGCTCGTTGCCGAATCCTCTTACTCTTTGCCCTCATACGAGGTACGAGCTTCACTCAAATCCATTTCGGAATTGAAACAAGCCCTCGATAATTTAAATTCTGAGTTGCTACCTAAAAAGAAATTCTCATTCAAAAACAAAGCCACGAAGAAAGACCAAAAATCAGAGTCGAAAGATCCAGGGCTTGAAAATGCTGATTCTATGTTAATGAACAAGCAACAGCAAGCGAGTTACAGCGCGCGGGATTCTCCAGGAATCAGAGACAAGGACGGAGAGATTCTGGTAAAGAATTTCAAGGGATCAGATGTTGGGGAATTCACTATCTCGGGTCTTAGTTCTTGTGAGGTCAAGTTGATCGGTAGTGTTAGGGCATTATTTATTCACAAACTAAGAAACTGCAAAGTTTACACAGGACCTGTAATGGGTTCAATTCTAATTGATGATGTTGAGGAATGTACCTTTGCAATGGCCTCCCATCAAATCCGGATTCACAACGCTAAGAAAAGCGATTTCTATCTCAGAGTCAGGAGTAGGCCGATCATTGAAGATAGTAGCAGCGTGCGATTCGCTCCCTATCGTGTGAGCTACGAAGGAATTGAAGAAGATCTCACAGATGCAACCCTTGGCGTGGAGACAGGGAATTGGGAAAATGTAGATGATTTTCGTTGGTTACGAGCCGTGCCGTCTCCGAACTGGTCGATTTTGCCGGAGGATGAGCGGATTGACACCATCAAAATCTCTCCCACAGAAGGTTAA

mRNA sequence

ATGGCGGACGCTGATGAACCTTCGTCGATCCCTAATTCTATTCCTTCAGATCCTTCAGACGCGAATCTCCAAAAGAAGCATGCTTCAGTCATCGAACGCCTAGCCAATCGCAATCAAACTCGCTTAGAGAATTCCATAACTCGCAGATCGGAATCCGATTCCTCTACCTCTTCCACTTCTTCCTTTCTCGACCGCTTTTCCGACTCCAAGCGCGCCATCGAGTCGGCACTCGCCCAATGCCGCCTCACACCGCCGGACCCCGCTCAACTCAGATCTCACCTCGATGGGATATCCACCTCAATCTCCGACCTCGAGAAGCTCGTTGCCGAATCCTCTTACTCTTTGCCCTCATACGAGGTACGAGCTTCACTCAAATCCATTTCGGAATTGAAACAAGCCCTCGATAATTTAAATTCTGAGTTGCTACCTAAAAAGAAATTCTCATTCAAAAACAAAGCCACGAAGAAAGACCAAAAATCAGAGTCGAAAGATCCAGGGCTTGAAAATGCTGATTCTATGTTAATGAACAAGCAACAGCAAGCGAGTTACAGCGCGCGGGATTCTCCAGGAATCAGAGACAAGGACGGAGAGATTCTGGTAAAGAATTTCAAGGGATCAGATGTTGGGGAATTCACTATCTCGGGTCTTAGTTCTTGTGAGGTCAAGTTGATCGGTAGTGTTAGGGCATTATTTATTCACAAACTAAGAAACTGCAAAGTTTACACAGGACCTGTAATGGGTTCAATTCTAATTGATGATGTTGAGGAATGTACCTTTGCAATGGCCTCCCATCAAATCCGGATTCACAACGCTAAGAAAAGCGATTTCTATCTCAGAGTCAGGAGTAGGCCGATCATTGAAGATAGTAGCAGCGTGCGATTCGCTCCCTATCGTGTGAGCTACGAAGGAATTGAAGAAGATCTCACAGATGCAACCCTTGGCGTGGAGACAGGGAATTGGGAAAATGTAGATGATTTTCGTTGGTTACGAGCCGTGCCGTCTCCGAACTGGTCGATTTTGCCGGAGGATGAGCGGATTGACACCATCAAAATCTCTCCCACAGAAGGTTAA

Coding sequence (CDS)

ATGGCGGACGCTGATGAACCTTCGTCGATCCCTAATTCTATTCCTTCAGATCCTTCAGACGCGAATCTCCAAAAGAAGCATGCTTCAGTCATCGAACGCCTAGCCAATCGCAATCAAACTCGCTTAGAGAATTCCATAACTCGCAGATCGGAATCCGATTCCTCTACCTCTTCCACTTCTTCCTTTCTCGACCGCTTTTCCGACTCCAAGCGCGCCATCGAGTCGGCACTCGCCCAATGCCGCCTCACACCGCCGGACCCCGCTCAACTCAGATCTCACCTCGATGGGATATCCACCTCAATCTCCGACCTCGAGAAGCTCGTTGCCGAATCCTCTTACTCTTTGCCCTCATACGAGGTACGAGCTTCACTCAAATCCATTTCGGAATTGAAACAAGCCCTCGATAATTTAAATTCTGAGTTGCTACCTAAAAAGAAATTCTCATTCAAAAACAAAGCCACGAAGAAAGACCAAAAATCAGAGTCGAAAGATCCAGGGCTTGAAAATGCTGATTCTATGTTAATGAACAAGCAACAGCAAGCGAGTTACAGCGCGCGGGATTCTCCAGGAATCAGAGACAAGGACGGAGAGATTCTGGTAAAGAATTTCAAGGGATCAGATGTTGGGGAATTCACTATCTCGGGTCTTAGTTCTTGTGAGGTCAAGTTGATCGGTAGTGTTAGGGCATTATTTATTCACAAACTAAGAAACTGCAAAGTTTACACAGGACCTGTAATGGGTTCAATTCTAATTGATGATGTTGAGGAATGTACCTTTGCAATGGCCTCCCATCAAATCCGGATTCACAACGCTAAGAAAAGCGATTTCTATCTCAGAGTCAGGAGTAGGCCGATCATTGAAGATAGTAGCAGCGTGCGATTCGCTCCCTATCGTGTGAGCTACGAAGGAATTGAAGAAGATCTCACAGATGCAACCCTTGGCGTGGAGACAGGGAATTGGGAAAATGTAGATGATTTTCGTTGGTTACGAGCCGTGCCGTCTCCGAACTGGTCGATTTTGCCGGAGGATGAGCGGATTGACACCATCAAAATCTCTCCCACAGAAGGTTAA

Protein sequence

MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTSSFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEVRASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVYTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVSYEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG*

Homology

[Close]

BLAST of CsaV3_UNG160200 vs. NCBI nr
Match: XP_004146878.1 (tubulin-folding cofactor C [Cucumis sativus] >XP_031745695.1 tubulin-folding cofactor C-like [Cucumis sativus] >XP_031745696.1 tubulin-folding cofactor C-like [Cucumis sativus] >XP_031745718.1 tubulin-folding cofactor C-like [Cucumis sativus] >KAE8637155.1 hypothetical protein CSA_004637 [Cucumis sativus] >KAE8637175.1 hypothetical protein CSA_018806 [Cucumis sativus] >KAE8637238.1 hypothetical protein CSA_021633 [Cucumis sativus] >KGN53206.1 hypothetical protein Csa_015020 [Cucumis sativus])

HSP 1 Score: 680.6 bits (1755), Expect = 7.1e-192
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS 60
           MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS
Sbjct: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120
           SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV
Sbjct: 61  SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ 180
           RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ 180

Query: 181 ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS 300
           YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS
Sbjct: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG 357
           YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG
Sbjct: 301 YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG 356

[Close]

BLAST of CsaV3_UNG160200 vs. NCBI nr
Match: XP_008453815.1 (PREDICTED: tubulin-folding cofactor C [Cucumis melo] >TYK16879.1 tubulin-folding cofactor C [Cucumis melo var. makuwa])

HSP 1 Score: 650.2 bits (1676), Expect = 1.0e-182
Identity = 343/356 (96.35%), Postives = 347/356 (97.47%), Query Frame = 0


Query: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS 60
           MADAD  SSIPNSIPSDPSDANLQKKHASVIERLA RNQTRLENSITRRSESDSSTSSTS
Sbjct: 1   MADADGASSIPNSIPSDPSDANLQKKHASVIERLAIRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120
           SFL RFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ 180
           RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGL NADSML NKQQQ
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLGNADSMLTNKQQQ 180

Query: 181 ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASY+ARDSPGIRDKDGEILVKNFKGSD+GEFTISGLSSCEVKLIG+VRALFIHKLRNCKV
Sbjct: 181 ASYNARDSPGIRDKDGEILVKNFKGSDIGEFTISGLSSCEVKLIGTVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS 300
           YTGPVMGSILIDDVEECTFAMASHQIRIHNAK SDFYLRVRSRPIIEDSSSVRFAPYRVS
Sbjct: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG 357
           YEGIEEDLTDA+LGVETGNWENVDDF WLRAVPSPNWSILPEDERIDTIKIS TEG
Sbjct: 301 YEGIEEDLTDASLGVETGNWENVDDFLWLRAVPSPNWSILPEDERIDTIKISLTEG 356

[Close]

BLAST of CsaV3_UNG160200 vs. NCBI nr
Match: KAA0044708.1 (tubulin-folding cofactor C [Cucumis melo var. makuwa])

HSP 1 Score: 649.0 bits (1673), Expect = 2.3e-182
Identity = 342/356 (96.07%), Postives = 347/356 (97.47%), Query Frame = 0


Query: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS 60
           MADAD  SSIPNSIPSDPSDANLQKKHASVIERLA RNQTRLENSITRRSESDSSTSSTS
Sbjct: 1   MADADGASSIPNSIPSDPSDANLQKKHASVIERLAIRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120
           SFL RFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ 180
           RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGL NADSML NKQQQ
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLGNADSMLTNKQQQ 180

Query: 181 ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASY+ARDSPGIRDKDGEILVKNFKGSD+GEFTISGLSSCEVKLIG+VRALFIHKLRNCKV
Sbjct: 181 ASYNARDSPGIRDKDGEILVKNFKGSDIGEFTISGLSSCEVKLIGTVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS 300
           YTGPVMGSILIDDV+ECTFAMASHQIRIHNAK SDFYLRVRSRPIIEDSSSVRFAPYRVS
Sbjct: 241 YTGPVMGSILIDDVQECTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG 357
           YEGIEEDLTDA+LGVETGNWENVDDF WLRAVPSPNWSILPEDERIDTIKIS TEG
Sbjct: 301 YEGIEEDLTDASLGVETGNWENVDDFLWLRAVPSPNWSILPEDERIDTIKISLTEG 356

[Close]

BLAST of CsaV3_UNG160200 vs. NCBI nr
Match: XP_023553493.1 (tubulin-folding cofactor C [Cucurbita pepo subsp. pepo])

HSP 1 Score: 601.7 bits (1550), Expect = 4.2e-168
Identity = 319/356 (89.61%), Postives = 332/356 (93.26%), Query Frame = 0


Query: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS 60
           MAD D  SSIPNSIP  PSD++LQKKHASVIERLANRNQTRLENSITRRSESDSS+SSTS
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60

Query: 61  SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120
           SFL RFSDSKRAIES LAQCRLTPP+P+Q+RSHLDGIS SISDLEKLVAE+SYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120

Query: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ 180
           RASLKSISELKQ+L++LNSELLPKKKFSFKNK TKKD KSESKD GL NA SML NKQQQ
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASY ARDSPGIRDKDGE+LVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 ASYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS 300
           YTGPVMGSILIDDVE CTFAMASHQIRIHNAK SDFYLRVRSRPIIEDSSSVRFAPY VS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG 357
           YEGIEEDL DA+LG ETGNWENVDDFRWLRAV SPNWSIL  DERIDT+KIS TEG
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVHSPNWSILAADERIDTVKISSTEG 356

[Close]

BLAST of CsaV3_UNG160200 vs. NCBI nr
Match: KAG6577293.1 (Tubulin-folding cofactor C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 599.7 bits (1545), Expect = 1.6e-167
Identity = 318/356 (89.33%), Postives = 331/356 (92.98%), Query Frame = 0


Query: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS 60
           MAD D  SSIPNSIP  PSD++LQKKHASVIERLANRNQTRLENSITRRSESDSS+SSTS
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLQKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60

Query: 61  SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120
           SFL RFSDSKRAIES LAQCRLTPP+P+Q+RSHLDGIS SISDLEKLVAE+SYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120

Query: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ 180
           RASLKSISELKQ+L++LNSELLPKKKFSFKNK TKKD KSESKD GL NA SML NKQQQ
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
            SY ARDSPGIRDKDGE+LVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 PSYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS 300
           YTGPVMGSILIDDVE CTFAMASHQIRIHNAK SDFYLRVRSRPIIEDSSSVRFAPY VS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG 357
           YEGIEEDL DA+LG ETGNWENVDDFRWLRAV SPNWSIL E ERIDT+KIS TEG
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 356

[Close]

BLAST of CsaV3_UNG160200 vs. ExPASy Swiss-Prot
Match: Q9SMR2 (Tubulin-folding cofactor C OS=Arabidopsis thaliana OX=3702 GN=TFCC PE=1 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 3.8e-103
Identity = 204/335 (60.90%), Postives = 256/335 (76.42%), Query Frame = 0


Query: 20  DANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTSSFLDRFSDSKRAIESALAQ 79
           D  LQKKH  ++ERL+ R+Q R  +S    S S S+  STSSFL +FSDSKR+IES +A+
Sbjct: 14  DPALQKKHHDMLERLSARHQARKSDSPDSSSSSSSTLESTSSFLAKFSDSKRSIESRIAE 73

Query: 80  CRL--TPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEVRASLKSISELKQALDNL 139
            RL  +  D ++L+S L  IS +I +LEKL+AE+SY LPSYEVR+SLK +S+LKQ+LD L
Sbjct: 74  SRLASSSTDSSKLKSDLAEISVAIDNLEKLLAENSYFLPSYEVRSSLKIVSDLKQSLDIL 133

Query: 140 NSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQASYSARDSPGIRDKDGE 199
           + EL+PKKKFSFK+K+T K  K ESK P ++  D +L  K        RDSPG+R+K GE
Sbjct: 134 SGELVPKKKFSFKSKSTTK--KPESKLPEIQKPDVVLPPK----LVPVRDSPGLRNKHGE 193

Query: 200 ILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVYTGPVMGSILIDDVEEC 259
            LVK+F+GS +GEFT+S L SC+VKL G+V ALF+H+L+ C VYTGPV+GSILIDDVE+C
Sbjct: 194 TLVKSFEGSSIGEFTLSDLDSCQVKLTGTVNALFLHRLKKCSVYTGPVIGSILIDDVEDC 253

Query: 260 TFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVSYEGIEEDLTDATLGVET 319
              +ASHQIRIH A+KSDFYLRVRSRPIIEDS+ VRFAPY + Y+GI+EDL  A L  ET
Sbjct: 254 VLVLASHQIRIHCARKSDFYLRVRSRPIIEDSNGVRFAPYCLDYKGIDEDLKTAGLEEET 313

Query: 320 GNWENVDDFRWLRAVPSPNWSILPEDERIDTIKIS 353
            NW NVDDFRWLRAV SPNWS+LPE+ER+  + IS
Sbjct: 314 NNWANVDDFRWLRAVQSPNWSLLPEEERVSLLTIS 342

[Close]

BLAST of CsaV3_UNG160200 vs. ExPASy Swiss-Prot
Match: Q8VCN9 (Tubulin-specific chaperone C OS=Mus musculus OX=10090 GN=Tbcc PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.6e-39
Identity = 114/352 (32.39%), Postives = 178/352 (50.57%), Query Frame = 0


Query: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTR---LENSITRRSESDSSTS 60
           M   D   ++ ++    P D +L      V ERL  R Q R   +E    +R + +    
Sbjct: 1   MEGVDCSMALADAAAGSPRDLSL------VPERLQRREQERQIEVERRKQKRQDQEVEEE 60

Query: 61  STSSFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPS 120
            +  F   F+  + A+E  L                L+  +  +  L KL+ +S   L +
Sbjct: 61  KSGFFAAAFARERAAVEELLR--------GEASAERLEEAANRLQGLRKLLNDSVLFLAA 120

Query: 121 YEVRASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESK---DPGLENADSML 180
           Y++R    ++++L+  L     EL PKK+F+F  KA KKD    ++    P    A S  
Sbjct: 121 YDLRQGQAALAQLQAVLTERRQELQPKKRFAF--KARKKDAAGTAQVDAAPVTSAAPSPP 180

Query: 181 MNKQQQASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHK 240
           + K+++ +  A  + G  + + + L K  +     +  +S L++C VKL G+   L + K
Sbjct: 181 VTKEEEGAPGASWACGFSNLESQDLEKRAEELHQRDVLLSDLTNCTVKLCGNPNTLRLAK 240

Query: 241 LRNCKVYTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRF 300
            R CKV  GPV  S+ ++D  +C  A+A  Q+R+H  K +  +L+V SR I+ED S ++F
Sbjct: 241 ARGCKVLCGPVTTSVFLEDCRDCVLAVACQQLRVHTTKDTRVFLQVTSRAIVEDCSGIQF 300

Query: 301 APYRVSYEGIEEDLTDATLGVETGNWENVDDFRWL-RAVPSPNWSILPEDER 346
           APY  SY GI++D  D+ L     NW+ VDDF WL R V SPNWSILPE+ER
Sbjct: 301 APYTWSYPGIDKDFQDSGLDRSKNNWDQVDDFNWLARNVASPNWSILPEEER 336

[Close]

BLAST of CsaV3_UNG160200 vs. ExPASy Swiss-Prot
Match: Q5R5J7 (Tubulin-specific chaperone C OS=Pongo abelii OX=9601 GN=TBCC PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.2e-38
Identity = 106/345 (30.72%), Postives = 178/345 (51.59%), Query Frame = 0


Query: 12  NSIPSDPSDANLQKKHASVIERLANRNQTR---LENSITRRSESDSSTSSTSSFLDRFSD 71
           ++ P    D   Q+  + V ERL  R Q R   +E    +R   +    ++  F   F+ 
Sbjct: 7   SAAPVRSGDMESQRDMSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFAATFAR 66

Query: 72  SKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEVRASLKSIS 131
            + A+E  L        + A+    L+  ++ +  L+KL+ +S + L +Y++R   ++++
Sbjct: 67  ERAAVEELL--------ERAESVERLEEAASRLQGLQKLINDSVFFLAAYDLRQGQEALA 126

Query: 132 ELKQALDNLNSELLPKKKFSFKNKATKKDQKSESK-------DPGLENADSMLMNKQQQA 191
            L+ AL     EL PKK+F+FK +   KD  S +K        P +E+     + K+ + 
Sbjct: 127 RLQAALAERRRELQPKKRFAFKTRG--KDAASCTKVDAAPGIPPAVESIQDSPLPKKAEG 186

Query: 192 SYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVY 251
              +    G  + + ++L K        +  ++ LS+C V+L G+   L + K  +CK+ 
Sbjct: 187 DLGSSWLCGFSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLL 246

Query: 252 TGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVSY 311
            GPV  S+ ++D  +C  A+A  Q+RIH+ K +  +L+V SR I+ED S ++FAPY  SY
Sbjct: 247 CGPVSTSVFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTWSY 306

Query: 312 EGIEEDLTDATLGVETGNWENVDDFRWL-RAVPSPNWSILPEDER 346
             I++D   + L     NW +VDDF WL R + SPNW ILPE+ER
Sbjct: 307 PEIDKDFESSGLDRSKNNWNDVDDFNWLARDMASPNWCILPEEER 341

[Close]

BLAST of CsaV3_UNG160200 vs. ExPASy Swiss-Prot
Match: Q15814 (Tubulin-specific chaperone C OS=Homo sapiens OX=9606 GN=TBCC PE=1 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-37
Identity = 105/337 (31.16%), Postives = 174/337 (51.63%), Query Frame = 0


Query: 20  DANLQKKHASVIERLANRNQTR---LENSITRRSESDSSTSSTSSFLDRFSDSKRAIESA 79
           D   Q+  + V ERL  R Q R   +E    +R   +    ++  F+  F   + A+E  
Sbjct: 15  DMESQRDLSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFVATFVRERAAVEEL 74

Query: 80  LAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEVRASLKSISELKQALDN 139
           L        + A+    L+  ++ +  L+KL+ +S + L +Y++R   ++++ L+ AL  
Sbjct: 75  L--------ERAESVERLEEAASRLQGLQKLINDSVFFLAAYDLRQGQEALARLQAALAE 134

Query: 140 LNSELLPKKKFSFKNKATKKDQKSESK-------DPGLENADSMLMNKQQQASYSARDSP 199
               L PKK+F+FK +   KD  S +K        P +E+     + K+ +         
Sbjct: 135 RRRGLQPKKRFAFKTRG--KDAASSTKVDAAPGIPPAVESIQDSPLPKKAEGDLGPSWVC 194

Query: 200 GIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVYTGPVMGSI 259
           G  + + ++L K        +  ++ LS+C V+L G+   L + K  +CK+  GPV  S+
Sbjct: 195 GFSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTSV 254

Query: 260 LIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVSYEGIEEDLT 319
            ++D  +C  A+A  Q+RIH+ K +  +L+V SR I+ED S ++FAPY  SY  I++D  
Sbjct: 255 FLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTWSYPEIDKDFE 314

Query: 320 DATLGVETGNWENVDDFRWL-RAVPSPNWSILPEDER 346
            + L     NW +VDDF WL R + SPNWSILPE+ER
Sbjct: 315 SSGLDRSKNNWNDVDDFNWLARDMASPNWSILPEEER 341

[Close]

BLAST of CsaV3_UNG160200 vs. ExPASy Swiss-Prot
Match: Q3SZE9 (Tubulin-specific chaperone C OS=Bos taurus OX=9913 GN=TBCC PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.2e-35
Identity = 99/336 (29.46%), Postives = 171/336 (50.89%), Query Frame = 0


Query: 20  DANLQKKHASVIERLANR---NQTRLENSITRRSESDSSTSSTSSFLDRFSDSKRAIESA 79
           D   Q++   V ERL  R    Q  +E    +R + +     +  F   F+  + A+E  
Sbjct: 15  DLGSQRERTLVPERLQKREHERQLEVERRKQKRQDQEVEEEKSDFFAAAFARERSAVEEL 74

Query: 80  LAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEVRASLKSISELKQALDN 139
           L        +  +    L+  +  +  L+KL+ +S   L +Y++R + + ++ L+ AL  
Sbjct: 75  L--------ESGESVERLEEAAARLQGLQKLINDSVLFLAAYDLRQAQEVLARLQAALAK 134

Query: 140 LNSELLPKKKFSFKNKATKKDQKSESK------DPGLENADSMLMNKQQQASYSARDSPG 199
              EL PKK+F+FK +  KKD  S ++       P  E + +     +++  + +    G
Sbjct: 135 RRQELQPKKRFAFKTR--KKDAASATQVASAPDAPAAEGSLTSPPPLKEEGDFDSSWICG 194

Query: 200 IRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVYTGPVMGSIL 259
             +   ++L K  +     +  ++ L +C +KL G+   L + K + C +  GPV  S+ 
Sbjct: 195 FSNLQSQVLEKRAEELHQQDVLLTQLRNCTIKLYGNPNTLRLTKAQGCTLLCGPVSTSVF 254

Query: 260 IDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVSYEGIEEDLTD 319
           ++D  +C  A+A  Q+R+H  K +  +L+V SR I+ED + ++FAPY  SY GI++D   
Sbjct: 255 LEDCSDCVLAVACQQLRVHTTKDTRIFLQVTSRAIMEDCTGIQFAPYTWSYPGIDKDFEG 314

Query: 320 ATLGVETGNWENVDDFRWL-RAVPSPNWSILPEDER 346
           + L     NW +VDDF WL R V SPNW++LPE+ER
Sbjct: 315 SGLDKNKNNWNDVDDFNWLARDVASPNWNVLPEEER 340

[Close]

BLAST of CsaV3_UNG160200 vs. ExPASy TrEMBL
Match: A0A0A0KZA3 (Tubulin-folding cofactor C OS=Cucumis sativus OX=3659 GN=Csa_4G026830 PE=3 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.5e-192
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS 60
           MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS
Sbjct: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120
           SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV
Sbjct: 61  SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ 180
           RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ 180

Query: 181 ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS 300
           YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS
Sbjct: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG 357
           YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG
Sbjct: 301 YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG 356

[Close]

BLAST of CsaV3_UNG160200 vs. ExPASy TrEMBL
Match: A0A5D3D2T6 (Tubulin-folding cofactor C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00100 PE=3 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 5.0e-183
Identity = 343/356 (96.35%), Postives = 347/356 (97.47%), Query Frame = 0


Query: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS 60
           MADAD  SSIPNSIPSDPSDANLQKKHASVIERLA RNQTRLENSITRRSESDSSTSSTS
Sbjct: 1   MADADGASSIPNSIPSDPSDANLQKKHASVIERLAIRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120
           SFL RFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ 180
           RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGL NADSML NKQQQ
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLGNADSMLTNKQQQ 180

Query: 181 ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASY+ARDSPGIRDKDGEILVKNFKGSD+GEFTISGLSSCEVKLIG+VRALFIHKLRNCKV
Sbjct: 181 ASYNARDSPGIRDKDGEILVKNFKGSDIGEFTISGLSSCEVKLIGTVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS 300
           YTGPVMGSILIDDVEECTFAMASHQIRIHNAK SDFYLRVRSRPIIEDSSSVRFAPYRVS
Sbjct: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG 357
           YEGIEEDLTDA+LGVETGNWENVDDF WLRAVPSPNWSILPEDERIDTIKIS TEG
Sbjct: 301 YEGIEEDLTDASLGVETGNWENVDDFLWLRAVPSPNWSILPEDERIDTIKISLTEG 356

[Close]

BLAST of CsaV3_UNG160200 vs. ExPASy TrEMBL
Match: A0A1S3BX62 (Tubulin-folding cofactor C OS=Cucumis melo OX=3656 GN=LOC103494429 PE=3 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 5.0e-183
Identity = 343/356 (96.35%), Postives = 347/356 (97.47%), Query Frame = 0


Query: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS 60
           MADAD  SSIPNSIPSDPSDANLQKKHASVIERLA RNQTRLENSITRRSESDSSTSSTS
Sbjct: 1   MADADGASSIPNSIPSDPSDANLQKKHASVIERLAIRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120
           SFL RFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ 180
           RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGL NADSML NKQQQ
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLGNADSMLTNKQQQ 180

Query: 181 ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASY+ARDSPGIRDKDGEILVKNFKGSD+GEFTISGLSSCEVKLIG+VRALFIHKLRNCKV
Sbjct: 181 ASYNARDSPGIRDKDGEILVKNFKGSDIGEFTISGLSSCEVKLIGTVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS 300
           YTGPVMGSILIDDVEECTFAMASHQIRIHNAK SDFYLRVRSRPIIEDSSSVRFAPYRVS
Sbjct: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG 357
           YEGIEEDLTDA+LGVETGNWENVDDF WLRAVPSPNWSILPEDERIDTIKIS TEG
Sbjct: 301 YEGIEEDLTDASLGVETGNWENVDDFLWLRAVPSPNWSILPEDERIDTIKISLTEG 356

[Close]

BLAST of CsaV3_UNG160200 vs. ExPASy TrEMBL
Match: A0A5A7TP94 (Tubulin-folding cofactor C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004650 PE=3 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.1e-182
Identity = 342/356 (96.07%), Postives = 347/356 (97.47%), Query Frame = 0


Query: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS 60
           MADAD  SSIPNSIPSDPSDANLQKKHASVIERLA RNQTRLENSITRRSESDSSTSSTS
Sbjct: 1   MADADGASSIPNSIPSDPSDANLQKKHASVIERLAIRNQTRLENSITRRSESDSSTSSTS 60

Query: 61  SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120
           SFL RFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120

Query: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ 180
           RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGL NADSML NKQQQ
Sbjct: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLGNADSMLTNKQQQ 180

Query: 181 ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASY+ARDSPGIRDKDGEILVKNFKGSD+GEFTISGLSSCEVKLIG+VRALFIHKLRNCKV
Sbjct: 181 ASYNARDSPGIRDKDGEILVKNFKGSDIGEFTISGLSSCEVKLIGTVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS 300
           YTGPVMGSILIDDV+ECTFAMASHQIRIHNAK SDFYLRVRSRPIIEDSSSVRFAPYRVS
Sbjct: 241 YTGPVMGSILIDDVQECTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYRVS 300

Query: 301 YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG 357
           YEGIEEDLTDA+LGVETGNWENVDDF WLRAVPSPNWSILPEDERIDTIKIS TEG
Sbjct: 301 YEGIEEDLTDASLGVETGNWENVDDFLWLRAVPSPNWSILPEDERIDTIKISLTEG 356

[Close]

BLAST of CsaV3_UNG160200 vs. ExPASy TrEMBL
Match: A0A6J1EMN1 (Tubulin-folding cofactor C OS=Cucurbita moschata OX=3662 GN=LOC111435895 PE=3 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 7.7e-168
Identity = 318/356 (89.33%), Postives = 331/356 (92.98%), Query Frame = 0


Query: 1   MADADEPSSIPNSIPSDPSDANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTS 60
           MAD D  SSIPNSIP  PSD++L KKHASVIERLANRNQTRLENSITRRSESDSS+SSTS
Sbjct: 1   MADDDGASSIPNSIPPHPSDSSLHKKHASVIERLANRNQTRLENSITRRSESDSSSSSTS 60

Query: 61  SFLDRFSDSKRAIESALAQCRLTPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEV 120
           SFL RFSDSKRAIES LAQCRLTPP+P+Q+RSHLDGIS SISDLEKLVAE+SYSLPSYEV
Sbjct: 61  SFLVRFSDSKRAIESDLAQCRLTPPEPSQVRSHLDGISASISDLEKLVAETSYSLPSYEV 120

Query: 121 RASLKSISELKQALDNLNSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQ 180
           RASLKSISELKQ+L++LNSELLPKKKFSFKNK TKKD KSESKD GL NA SML NKQQQ
Sbjct: 121 RASLKSISELKQSLEDLNSELLPKKKFSFKNKGTKKDTKSESKDLGLGNAGSMLTNKQQQ 180

Query: 181 ASYSARDSPGIRDKDGEILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240
           ASY ARDSPGIRDKDGE+LVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV
Sbjct: 181 ASYIARDSPGIRDKDGEVLVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKV 240

Query: 241 YTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVS 300
           YTGPVMGSILIDDVE CTFAMASHQIRIHNAK SDFYLRVRSRPIIEDSSSVRFAPY VS
Sbjct: 241 YTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVRSRPIIEDSSSVRFAPYCVS 300

Query: 301 YEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERIDTIKISPTEG 357
           YEGIEEDL DA+LG ETGNWENVDDFRWLRAV SPNWSIL E ERIDT+KIS TEG
Sbjct: 301 YEGIEEDLKDASLGEETGNWENVDDFRWLRAVQSPNWSILAEGERIDTVKISSTEG 356

[Close]

BLAST of CsaV3_UNG160200 vs. TAIR 10
Match: AT4G39920.1 (C-CAP/cofactor C-like domain-containing protein )

HSP 1 Score: 376.3 bits (965), Expect = 2.7e-104
Identity = 204/335 (60.90%), Postives = 256/335 (76.42%), Query Frame = 0


Query: 20  DANLQKKHASVIERLANRNQTRLENSITRRSESDSSTSSTSSFLDRFSDSKRAIESALAQ 79
           D  LQKKH  ++ERL+ R+Q R  +S    S S S+  STSSFL +FSDSKR+IES +A+
Sbjct: 14  DPALQKKHHDMLERLSARHQARKSDSPDSSSSSSSTLESTSSFLAKFSDSKRSIESRIAE 73

Query: 80  CRL--TPPDPAQLRSHLDGISTSISDLEKLVAESSYSLPSYEVRASLKSISELKQALDNL 139
            RL  +  D ++L+S L  IS +I +LEKL+AE+SY LPSYEVR+SLK +S+LKQ+LD L
Sbjct: 74  SRLASSSTDSSKLKSDLAEISVAIDNLEKLLAENSYFLPSYEVRSSLKIVSDLKQSLDIL 133

Query: 140 NSELLPKKKFSFKNKATKKDQKSESKDPGLENADSMLMNKQQQASYSARDSPGIRDKDGE 199
           + EL+PKKKFSFK+K+T K  K ESK P ++  D +L  K        RDSPG+R+K GE
Sbjct: 134 SGELVPKKKFSFKSKSTTK--KPESKLPEIQKPDVVLPPK----LVPVRDSPGLRNKHGE 193

Query: 200 ILVKNFKGSDVGEFTISGLSSCEVKLIGSVRALFIHKLRNCKVYTGPVMGSILIDDVEEC 259
            LVK+F+GS +GEFT+S L SC+VKL G+V ALF+H+L+ C VYTGPV+GSILIDDVE+C
Sbjct: 194 TLVKSFEGSSIGEFTLSDLDSCQVKLTGTVNALFLHRLKKCSVYTGPVIGSILIDDVEDC 253

Query: 260 TFAMASHQIRIHNAKKSDFYLRVRSRPIIEDSSSVRFAPYRVSYEGIEEDLTDATLGVET 319
              +ASHQIRIH A+KSDFYLRVRSRPIIEDS+ VRFAPY + Y+GI+EDL  A L  ET
Sbjct: 254 VLVLASHQIRIHCARKSDFYLRVRSRPIIEDSNGVRFAPYCLDYKGIDEDLKTAGLEEET 313

Query: 320 GNWENVDDFRWLRAVPSPNWSILPEDERIDTIKIS 353
            NW NVDDFRWLRAV SPNWS+LPE+ER+  + IS
Sbjct: 314 NNWANVDDFRWLRAVQSPNWSLLPEEERVSLLTIS 342

The following BLAST results are available for this feature:

BLAST of CsaV3_UNG160200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146878.1	7.1e-192	100.00	tubulin-folding cofactor C [Cucumis sativus] >XP_031745695.1 tubulin-folding cof...	[more]
XP_008453815.1	1.0e-182	96.35	PREDICTED: tubulin-folding cofactor C [Cucumis melo] >TYK16879.1 tubulin-folding...	[more]
KAA0044708.1	2.3e-182	96.07	tubulin-folding cofactor C [Cucumis melo var. makuwa]	[more]
XP_023553493.1	4.2e-168	89.61	tubulin-folding cofactor C [Cucurbita pepo subsp. pepo]	[more]
KAG6577293.1	1.6e-167	89.33	Tubulin-folding cofactor C, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CsaV3_UNG160200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMR2	3.8e-103	60.90	Tubulin-folding cofactor C OS=Arabidopsis thaliana OX=3702 GN=TFCC PE=1 SV=1	[more]
Q8VCN9	6.6e-39	32.39	Tubulin-specific chaperone C OS=Mus musculus OX=10090 GN=Tbcc PE=1 SV=1	[more]
Q5R5J7	7.2e-38	30.72	Tubulin-specific chaperone C OS=Pongo abelii OX=9601 GN=TBCC PE=2 SV=1	[more]
Q15814	1.2e-37	31.16	Tubulin-specific chaperone C OS=Homo sapiens OX=9606 GN=TBCC PE=1 SV=2	[more]
Q3SZE9	1.2e-35	29.46	Tubulin-specific chaperone C OS=Bos taurus OX=9913 GN=TBCC PE=2 SV=1	[more]

BLAST of CsaV3_UNG160200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZA3	3.5e-192	100.00	Tubulin-folding cofactor C OS=Cucumis sativus OX=3659 GN=Csa_4G026830 PE=3 SV=1	[more]
A0A5D3D2T6	5.0e-183	96.35	Tubulin-folding cofactor C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BX62	5.0e-183	96.35	Tubulin-folding cofactor C OS=Cucumis melo OX=3656 GN=LOC103494429 PE=3 SV=1	[more]
A0A5A7TP94	1.1e-182	96.07	Tubulin-folding cofactor C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A6J1EMN1	7.7e-168	89.33	Tubulin-folding cofactor C OS=Cucurbita moschata OX=3662 GN=LOC111435895 PE=3 SV...	[more]

BLAST of CsaV3_UNG160200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39920.1	2.7e-104	60.90	C-CAP/cofactor C-like domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 120..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..23
IPR006599	CARP motif	SMART	SM00673	carp	coord: 254..288 e-value: 2.2E-4 score: 30.6 coord: 216..253 e-value: 3.8E-6 score: 36.4
IPR038397	TBCC, N-terminal domain superfamily	GENE3D	1.20.58.1250		coord: 24..145 e-value: 1.2E-23 score: 85.4
IPR012945	Tubulin binding cofactor C-like domain	PFAM	PF07986	TBCC	coord: 210..326 e-value: 3.4E-39 score: 133.3
IPR016098	Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal	GENE3D	2.160.20.70		coord: 190..355 e-value: 1.5E-55 score: 189.4
IPR031925	Tubulin-specific chaperone C, N-terminal	PFAM	PF16752	TBCC_N	coord: 32..145 e-value: 5.5E-30 score: 104.1
IPR027684	Tubulin-specific chaperone C	PANTHER	PTHR15139	TUBULIN FOLDING COFACTOR C	coord: 23..352
IPR017901	C-CAP/cofactor C-like domain	PROSITE	PS51329	C_CAP_COFACTOR_C	coord: 177..328 score: 34.176373

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_UNG160200.1	CsaV3_UNG160200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0007023	post-chaperonin tubulin folding pathway
molecular_function	GO:0015631	tubulin binding