CsaV3_UNG052400 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_UNG052400
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Ist1 domain-containing protein
Location	scaffold72: 46119 .. 46798 (-)
RNA-Seq Expression	CsaV3_UNG052400
Synteny	CsaV3_UNG052400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAACAGTCCTCATCGAGTTATTGGACTTTCTAGACGGACCAAAGCGTCTCCTAAAAGTCCAAGTCCACATTTAGAGGACTCACACAGGACTCCCACGACCATGAGTCATGAGGATATAATTGAGAGAAAAGCTTCAACGAGTTTCTATGCAACTACATCGCCACTGAGGGCAAAAACTGGAACAAGATACTCTGATCGTTTGGAAATTTCAGAGCAGCCTCAATCATCTAAACCTTTCAAGCAAACTCATGAAACTAAGAGGTCTTTTATTGAGGAAAGGTCTAGACCTTCTGCAGAGGAACAGCAATACAATTATCCACCAGAGATAAATAGACGAGGCAATTTTGAGAGTTCAAAGTTTTCTTCTTCAAGGGATACGACAGCAGCTCCAGTGAAGACTCGGGTTCAATCAAGTAACTCAGAGCAACCTCAGTCAATGAAACCTTCCAAACCAATTCCTGAAACTAAAAATCTATCCATGAAGAAAAATTAAAATCTCCTACGAAGGACTTGCCATCCACTCCTTCACCAAAATTAGAAACACAAGGCAACTCTGAGAGTTCGAAAAAGGAGAAGACTGAGGCAGTTGAGAAAGCTAGTCATGTTCACCCAAAGCTACCCGACTACGACAACTTTGCAGCTCACTTCCTCGCTCTTAGACAGAATAACAAGTAA

mRNA sequence

ATGAAAAACAGTCCTCATCGAGTTATTGGACTTTCTAGACGGACCAAAGCGTCTCCTAAAAGTCCAAGTCCACATTTAGAGGACTCACACAGGACTCCCACGACCATGAGTCATGAGGATATAATTGAGAGAAAAGCTTCAACGAGTTTCTATGCAACTACATCGCCACTGAGGGCAAAAACTGGAACAAGATACTCTGATCGTTTGGAAATTTCAGAGCAGCCTCAATCATCTAAACCTTTCAAGCAAACTCATGAAACTAAGAGGTCTTTTATTGAGGAAAGGTCTAGACCTTCTGCAGAGGAACAGCAATACAATTATCCACCAGAGATAAATAGACGAGGCAATTTTGAGAGTTCAAAGTTTTCTTCTTCAAGGGATACGACAGCAGCTCCAGTGAAGACTCGGGACTTGCCATCCACTCCTTCACCAAAATTAGAAACACAAGGCAACTCTGAGAGTTCGAAAAAGGAGAAGACTGAGGCAGTTGAGAAAGCTAGTCATGTTCACCCAAAGCTACCCGACTACGACAACTTTGCAGCTCACTTCCTCGCTCTTAGACAGAATAACAAGTAA

Coding sequence (CDS)

ATGAAAAACAGTCCTCATCGAGTTATTGGACTTTCTAGACGGACCAAAGCGTCTCCTAAAAGTCCAAGTCCACATTTAGAGGACTCACACAGGACTCCCACGACCATGAGTCATGAGGATATAATTGAGAGAAAAGCTTCAACGAGTTTCTATGCAACTACATCGCCACTGAGGGCAAAAACTGGAACAAGATACTCTGATCGTTTGGAAATTTCAGAGCAGCCTCAATCATCTAAACCTTTCAAGCAAACTCATGAAACTAAGAGGTCTTTTATTGAGGAAAGGTCTAGACCTTCTGCAGAGGAACAGCAATACAATTATCCACCAGAGATAAATAGACGAGGCAATTTTGAGAGTTCAAAGTTTTCTTCTTCAAGGGATACGACAGCAGCTCCAGTGAAGACTCGGGACTTGCCATCCACTCCTTCACCAAAATTAGAAACACAAGGCAACTCTGAGAGTTCGAAAAAGGAGAAGACTGAGGCAGTTGAGAAAGCTAGTCATGTTCACCCAAAGCTACCCGACTACGACAACTTTGCAGCTCACTTCCTCGCTCTTAGACAGAATAACAAGTAA

Protein sequence

MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAKTGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESSKFSSSRDTTAAPVKTRDLPSTPSPKLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK*

Homology

[Close]

BLAST of CsaV3_UNG052400 vs. NCBI nr
Match: KAE8637450.1 (hypothetical protein CSA_004483 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 7.2e-98
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
           MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK
Sbjct: 1   MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60

Query: 61  TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
           TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS
Sbjct: 61  TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120

Query: 121 KFSSSRDTTAAPVKTRDLPSTPSPKLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFA 180
           KFSSSRDTTAAPVKTRDLPSTPSPKLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFA
Sbjct: 121 KFSSSRDTTAAPVKTRDLPSTPSPKLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFA 180

Query: 181 AHFLALRQNNK 192
           AHFLALRQNNK
Sbjct: 181 AHFLALRQNNK 191

[Close]

BLAST of CsaV3_UNG052400 vs. NCBI nr
Match: KAE8653412.1 (hypothetical protein Csa_007286 [Cucumis sativus])

HSP 1 Score: 349.7 bits (896), Expect = 1.6e-92
Identity = 191/226 (84.51%), Postives = 191/226 (84.51%), Query Frame = 0


Query: 1   MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
           MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK
Sbjct: 358 MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 417

Query: 61  TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
           TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS
Sbjct: 418 TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 477

Query: 121 KFSSSRDTTAAPVKTR-----------------------------------DLPSTPSPK 180
           KFSSSRDTTAAPVKTR                                   DLPSTPSPK
Sbjct: 478 KFSSSRDTTAAPVKTRVQSSNSEQPQSMKPSKPIPETKKSIHEEKLKSPTKDLPSTPSPK 537

Query: 181 LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
           LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK
Sbjct: 538 LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 583

[Close]

BLAST of CsaV3_UNG052400 vs. NCBI nr
Match: XP_031742590.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC101217093 [Cucumis sativus])

HSP 1 Score: 349.7 bits (896), Expect = 1.6e-92
Identity = 191/226 (84.51%), Postives = 191/226 (84.51%), Query Frame = 0


Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK
Sbjct: 881  MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 940

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS
Sbjct: 941  TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 1000

Query: 121  KFSSSRDTTAAPVKTR-----------------------------------DLPSTPSPK 180
            KFSSSRDTTAAPVKTR                                   DLPSTPSPK
Sbjct: 1001 KFSSSRDTTAAPVKTRVQSSNSEQPQSMKPSKPIPETKKSIHEEKLKSPTKDLPSTPSPK 1060

Query: 181  LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK
Sbjct: 1061 LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 1106

[Close]

BLAST of CsaV3_UNG052400 vs. NCBI nr
Match: XP_008450820.1 (PREDICTED: uncharacterized protein LOC103492291 [Cucumis melo] >TYK10119.1 Ist1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 3.6e-81
Identity = 173/226 (76.55%), Postives = 181/226 (80.09%), Query Frame = 0


Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            MKNSP RVIGLSRRTKASP+SPSP LE+SHR PT  SHEDIIERKA T FYAT SPLRAK
Sbjct: 937  MKNSPRRVIGLSRRTKASPRSPSPQLENSHRNPT--SHEDIIERKAPTGFYATASPLRAK 996

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTRYSDR EI EQPQSSKPFKQT++TKRSF+EERSRPSAEEQQYNYPPEINR+GNFESS
Sbjct: 997  TGTRYSDRSEIPEQPQSSKPFKQTYDTKRSFVEERSRPSAEEQQYNYPPEINRQGNFESS 1056

Query: 121  KFSSSRDTTAAPVKTR-----------------------------------DLPSTPSPK 180
            KFSSS+DTTAAPVKTR                                   DLPSTPSPK
Sbjct: 1057 KFSSSKDTTAAPVKTRVKSSNLEQPQSKKPSKPIPETTKSLHEERFKSPTKDLPSTPSPK 1116

Query: 181  LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            LETQGNSESSKKEKT+AVEKASHVHPKLPDYDNFAAHFLALRQNNK
Sbjct: 1117 LETQGNSESSKKEKTKAVEKASHVHPKLPDYDNFAAHFLALRQNNK 1160

[Close]

BLAST of CsaV3_UNG052400 vs. NCBI nr
Match: XP_038879144.1 (uncharacterized protein LOC120071136 [Benincasa hispida])

HSP 1 Score: 262.7 bits (670), Expect = 2.5e-66
Identity = 153/227 (67.40%), Postives = 168/227 (74.01%), Query Frame = 0


Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            MKNSP RVIGLSRRTKASPKSPSP LEDS+  PT  SHED  ERKASTSFYA+ SPL+AK
Sbjct: 945  MKNSPRRVIGLSRRTKASPKSPSPQLEDSYGMPT--SHEDRTERKASTSFYASASPLKAK 1004

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTRYSDRLE SEQPQSSKPFKQTHETKRS+IEER + SA+EQ + YPPE++R  NFESS
Sbjct: 1005 TGTRYSDRLETSEQPQSSKPFKQTHETKRSYIEERLKSSAQEQHHIYPPELDRPDNFESS 1064

Query: 121  KFSS-SRDTTAAPVK-----------------------------------TRDLPSTPSP 180
            KFSS SR+TTAA VK                                   T++LPS PSP
Sbjct: 1065 KFSSFSRETTAASVKARAESCNLEQPQSTKPSKPIPETKRSFHEERLKSSTKELPSNPSP 1124

Query: 181  KLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            KL T+GN ES KKEK +AVEKASHVHPKLPDYDNFAAHFL+LRQN K
Sbjct: 1125 KLATRGNPESPKKEKNKAVEKASHVHPKLPDYDNFAAHFLSLRQNPK 1169

[Close]

BLAST of CsaV3_UNG052400 vs. ExPASy TrEMBL
Match: A0A0A0LWR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580230 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.5e-93
Identity = 191/226 (84.51%), Postives = 191/226 (84.51%), Query Frame = 0


Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK
Sbjct: 942  MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 1001

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS
Sbjct: 1002 TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 1061

Query: 121  KFSSSRDTTAAPVKTR-----------------------------------DLPSTPSPK 180
            KFSSSRDTTAAPVKTR                                   DLPSTPSPK
Sbjct: 1062 KFSSSRDTTAAPVKTRVQSSNSEQPQSMKPSKPIPETKKSIHEEKLKSPTKDLPSTPSPK 1121

Query: 181  LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK
Sbjct: 1122 LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 1167

[Close]

BLAST of CsaV3_UNG052400 vs. ExPASy TrEMBL
Match: A0A5D3CIP5 (Ist1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002620 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.7e-81
Identity = 173/226 (76.55%), Postives = 181/226 (80.09%), Query Frame = 0


Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            MKNSP RVIGLSRRTKASP+SPSP LE+SHR PT  SHEDIIERKA T FYAT SPLRAK
Sbjct: 937  MKNSPRRVIGLSRRTKASPRSPSPQLENSHRNPT--SHEDIIERKAPTGFYATASPLRAK 996

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTRYSDR EI EQPQSSKPFKQT++TKRSF+EERSRPSAEEQQYNYPPEINR+GNFESS
Sbjct: 997  TGTRYSDRSEIPEQPQSSKPFKQTYDTKRSFVEERSRPSAEEQQYNYPPEINRQGNFESS 1056

Query: 121  KFSSSRDTTAAPVKTR-----------------------------------DLPSTPSPK 180
            KFSSS+DTTAAPVKTR                                   DLPSTPSPK
Sbjct: 1057 KFSSSKDTTAAPVKTRVKSSNLEQPQSKKPSKPIPETTKSLHEERFKSPTKDLPSTPSPK 1116

Query: 181  LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            LETQGNSESSKKEKT+AVEKASHVHPKLPDYDNFAAHFLALRQNNK
Sbjct: 1117 LETQGNSESSKKEKTKAVEKASHVHPKLPDYDNFAAHFLALRQNNK 1160

[Close]

BLAST of CsaV3_UNG052400 vs. ExPASy TrEMBL
Match: A0A1S3BQ24 (uncharacterized protein LOC103492291 OS=Cucumis melo OX=3656 GN=LOC103492291 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.7e-81
Identity = 173/226 (76.55%), Postives = 181/226 (80.09%), Query Frame = 0


Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            MKNSP RVIGLSRRTKASP+SPSP LE+SHR PT  SHEDIIERKA T FYAT SPLRAK
Sbjct: 937  MKNSPRRVIGLSRRTKASPRSPSPQLENSHRNPT--SHEDIIERKAPTGFYATASPLRAK 996

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTRYSDR EI EQPQSSKPFKQT++TKRSF+EERSRPSAEEQQYNYPPEINR+GNFESS
Sbjct: 997  TGTRYSDRSEIPEQPQSSKPFKQTYDTKRSFVEERSRPSAEEQQYNYPPEINRQGNFESS 1056

Query: 121  KFSSSRDTTAAPVKTR-----------------------------------DLPSTPSPK 180
            KFSSS+DTTAAPVKTR                                   DLPSTPSPK
Sbjct: 1057 KFSSSKDTTAAPVKTRVKSSNLEQPQSKKPSKPIPETTKSLHEERFKSPTKDLPSTPSPK 1116

Query: 181  LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            LETQGNSESSKKEKT+AVEKASHVHPKLPDYDNFAAHFLALRQNNK
Sbjct: 1117 LETQGNSESSKKEKTKAVEKASHVHPKLPDYDNFAAHFLALRQNNK 1160

[Close]

BLAST of CsaV3_UNG052400 vs. ExPASy TrEMBL
Match: A0A6J1E1U8 (uncharacterized protein LOC111025657 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025657 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 7.8e-58
Identity = 134/233 (57.51%), Postives = 165/233 (70.82%), Query Frame = 0


Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            +KNSPHR+IGLSRRT ASPK+PS ++EDS+ TPT  SH+D+ E+KAS S+Y++ +PL+AK
Sbjct: 960  VKNSPHRLIGLSRRTTASPKTPSSYVEDSYGTPT--SHDDVTEQKASRSYYSSPAPLKAK 1019

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTR S RLE SEQPQSSKPFKQT ETK    EER + SA+EQQ NYPPE++R+GN ESS
Sbjct: 1020 TGTRTSSRLESSEQPQSSKPFKQTPETKMPLNEERLKSSAKEQQSNYPPELDRQGNSESS 1079

Query: 121  KFSSSRDTTAAPVK------------------------------------------TRDL 180
            KFSS+R+TT A VK                                          T++L
Sbjct: 1080 KFSSARETTTASVKTWAQTRNSHYLANSEQPTQSTKPSKPIPESKRSFHEERLTSSTKEL 1139

Query: 181  PSTPSPKLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            PS PSP++ETQG+SESSK+EK +AV+KASHVHPKLPDYD+FAAHF +LRQN K
Sbjct: 1140 PSNPSPEVETQGDSESSKREKMKAVQKASHVHPKLPDYDDFAAHFRSLRQNYK 1190

[Close]

BLAST of CsaV3_UNG052400 vs. ExPASy TrEMBL
Match: A0A6J1DY48 (uncharacterized protein LOC111025657 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025657 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.7e-57
Identity = 133/231 (57.58%), Postives = 164/231 (71.00%), Query Frame = 0


Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            +KNSPHR+IGLSRRT ASPK+PS ++EDS+ TPT  SH+D+ E+KAS S+Y++ +PL+AK
Sbjct: 960  VKNSPHRLIGLSRRTTASPKTPSSYVEDSYGTPT--SHDDVTEQKASRSYYSSPAPLKAK 1019

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTR S RLE SEQPQSSKPFKQT ETK    EER + SA+EQQ NYPPE++R+GN ESS
Sbjct: 1020 TGTRTSSRLESSEQPQSSKPFKQTPETKMPLNEERLKSSAKEQQSNYPPELDRQGNSESS 1079

Query: 121  KFSSSRDTTAAPVK------------------------------------------TRDL 180
            KFSS+R+TT A VK                                          T++L
Sbjct: 1080 KFSSARETTTASVKTWAQTRNSHYLANSEQPTQSTKPSKPIPESKRSFHEERLTSSTKEL 1139

Query: 181  PSTPSPKLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQN 190
            PS PSP++ETQG+SESSK+EK +AV+KASHVHPKLPDYD+FAAHF +LRQN
Sbjct: 1140 PSNPSPEVETQGDSESSKREKMKAVQKASHVHPKLPDYDDFAAHFRSLRQN 1188

[Close]

BLAST of CsaV3_UNG052400 vs. TAIR 10
Match: AT2G14830.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 44.7 bits (104), Expect = 9.9e-05
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 0


Query: 153 ESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
           +   +E   + +KA HVHPKLPDYD   AHF ALR+  +
Sbjct: 408 QKESEEGERSFKKAMHVHPKLPDYDQIVAHFTALRKQQQ 446

The following BLAST results are available for this feature:

BLAST of CsaV3_UNG052400 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8637450.1	7.2e-98	100.00	hypothetical protein CSA_004483 [Cucumis sativus]	[more]
KAE8653412.1	1.6e-92	84.51	hypothetical protein Csa_007286 [Cucumis sativus]	[more]
XP_031742590.1	1.6e-92	84.51	LOW QUALITY PROTEIN: uncharacterized protein LOC101217093 [Cucumis sativus]	[more]
XP_008450820.1	3.6e-81	76.55	PREDICTED: uncharacterized protein LOC103492291 [Cucumis melo] >TYK10119.1 Ist1 ...	[more]
XP_038879144.1	2.5e-66	67.40	uncharacterized protein LOC120071136 [Benincasa hispida]	[more]

BLAST of CsaV3_UNG052400 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_UNG052400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWR1	7.5e-93	84.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580230 PE=3 SV=1	[more]
A0A5D3CIP5	1.7e-81	76.55	Ist1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BQ24	1.7e-81	76.55	uncharacterized protein LOC103492291 OS=Cucumis melo OX=3656 GN=LOC103492291 PE=...	[more]
A0A6J1E1U8	7.8e-58	57.51	uncharacterized protein LOC111025657 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DY48	1.7e-57	57.58	uncharacterized protein LOC111025657 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CsaV3_UNG052400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14830.1	9.9e-05	48.72	Regulator of Vps4 activity in the MVB pathway protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..61
None	No IPR available	PANTHER	PTHR12161:SF13	REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN	coord: 41..190
IPR005061	Vacuolar protein sorting-associated protein Ist1	PANTHER	PTHR12161	IST1 FAMILY MEMBER	coord: 41..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_UNG052400.1	CsaV3_UNG052400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport