CsaV3_7G034940 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCACAAGGCATGAAGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTACCCAGAGATACCGATGGAACGAGGAAAGTCTTTGAAAGAGATGAATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCTGTGGTGGCTTATGCCCGCACAGTAAGCGACCGCTTTGGAAGCCGACGTCGCTAA ATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCACAAGGCATGAAGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTACCCAGAGATACCGATGGAACGAGGAAAGTCTTTGAAAGAGATGAATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCTGTGGTGGCTTATGCCCGCACAGTAAGCGACCGCTTTGGAAGCCGACGTCGCTAA ATGTCTGTGAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCCTCACAAGGCATGAAGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTACCCAGAGATACCGATGGAACGAGGAAAGTCTTTGAAAGAGATGAATTCAGAGAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCTGTGGTGGCTTATGCCCGCACAGTAAGCGACCGCTTTGGAAGCCGACGTCGCTAA MSVKKSLSLTKAEEAKRLTRHEAARKRRRSFDLCFSYPEIPMERGKSLKEMNSEKLKTGIKKWAKAVVAYARTVSDRFGSRRR* Homology
BLAST of CsaV3_7G034940 vs. NCBI nr
Match: KGN45542.1 (hypothetical protein Csa_016865 [Cucumis sativus]) HSP 1 Score: 160.2 bits (404), Expect = 7.6e-36 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_7G034940 vs. NCBI nr
Match: KAA0059447.1 (hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa] >TYK03877.1 hypothetical protein E5676_scaffold347G00720 [Cucumis melo var. makuwa]) HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35 Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_7G034940 vs. NCBI nr
Match: KAG6593505.1 (hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 134.8 bits (338), Expect = 3.4e-28 Identity = 70/83 (84.34%), Postives = 77/83 (92.77%), Query Frame = 0
BLAST of CsaV3_7G034940 vs. NCBI nr
Match: KAG6575488.1 (hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 134.0 bits (336), Expect = 5.9e-28 Identity = 70/82 (85.37%), Postives = 75/82 (91.46%), Query Frame = 0
BLAST of CsaV3_7G034940 vs. NCBI nr
Match: XP_028964144.1 (uncharacterized protein LOC114827006 [Malus domestica] >RXH88728.1 hypothetical protein DVH24_000327 [Malus domestica] >TQD78432.1 hypothetical protein C1H46_036021 [Malus baccata]) HSP 1 Score: 87.4 bits (215), Expect = 6.3e-14 Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0
BLAST of CsaV3_7G034940 vs. ExPASy TrEMBL
Match: A0A0A0KB03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451980 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.7e-36 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_7G034940 vs. ExPASy TrEMBL
Match: A0A5A7UXU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00720 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.3e-36 Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_7G034940 vs. ExPASy TrEMBL
Match: A0A498IZM5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_000327 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.0e-14 Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0
BLAST of CsaV3_7G034940 vs. ExPASy TrEMBL
Match: A0A2P5FE88 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_080350 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.0e-14 Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of CsaV3_7G034940 vs. ExPASy TrEMBL
Match: A0A540KWP0 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_036021 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.0e-14 Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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