CsaV3_7G033830 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G033830
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionpyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like
Locationchr7: 21335457 .. 21336738 (+)
RNA-Seq ExpressionCsaV3_7G033830
SyntenyCsaV3_7G033830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTAAAGTTTTAGATGATCTTCAGATTATTGGTACAGTTCTAGAGGATCAAGATTACTTGGAGAAGATAACCAAGTTACAAGGTTACCTCGATGAGGTGAAACTACTGCTTATTAGTTTCTATCTTGAAATGAAACCATAGTTGTTACTGTATTTTCCTCATGGTCATAGAACAGCTATCCTTCAATCAATTTATCATAACTTGCTTGCTTATTGCTCGATGGCTTATTAGTTAGGCAATTTCTTATCAATATGATTTTGAGTATTTTGTAATTTCTTAGTGCAGCCAGAAAATTACGTGTCTTTTCTCCTAGTGCACTGTGCAGTGGTGATTTAGGACTCCCTGAGCCATGAACAAGAATGAAGGAAACTAGAAAACGATAGAAGACAGCTTAATCTAGAAACAAGAAATAAGTAATGTACTATCAAGTTTTAACAGTTTTGGTATCTTTTCAAGGGGTTGTTCTTTGATTGGAAAAAAATGCTTTTCTATATAGTATTCTCTCTATCGTTCATAAAGAGGAGGTTAGGGTGTAGTTTGTTGGATTTTTTGCCTAAAAAAAAGGTATACATTAGGCAAACAAAACAAAGTAGGTATGTATAATGAGTAAAGAAATGAAAAGGAATGAGTAAAGAATCACATCCTTACCATTCTATTTGAAACTTGTGAGTTTTGTAGACTTTTACATGTCTTCTCCTTCACTTACTATCATAAAGATTGTTCTAAGATAAGACAGCTCGTGCAGATTTATAGTTGTTAGAATACCTTGAATGTGTTTTCTGGTGTTTTAGAATGATCCTACACGGGTTTTGCTAGGATTAAAGGAGTGCACTATACATAAACTCTCTAGCTCTAGAGGCACCACTGGAATCTTAAGTTTAACATTTTATCTTTAATAACAAAAACTGCTCATCCCCTGCCCATGCACGTAGCTAACTCATTGTCTCTATTTGGATTCTCTACGGTTTTAGTTTTCTTCTCATCTCAACAGTTATTATTACGAAAAATGATGGAACCAAAACAAAGTTCTGTTTAAATTTGACTAATTGATAGAATGAACTTTTGTTTCCAAGATTCTTAATTTGTAAAGTAATAATGTTCTTATAAATCATTATTTTGATTTCTGCTTTGTGGTTCATATTCTACTCAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGAGGTTTTAGAACTGGCGTTGGACTCCATCTCATCCCTAATTACCATCCTCTCCTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA

mRNA sequence

ATGGAAGCTAAAGTTTTAGATGATCTTCAGATTATTGGTACAGTTCTAGAGGATCAAGATTACTTGGAGAAGATAACCAAGTTACAAGGTTACCTCGATGAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGAGGTTTTAGAACTGGCGTTGGACTCCATCTCATCCCTAATTACCATCCTCTCCTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA

Coding sequence (CDS)

ATGGAAGCTAAAGTTTTAGATGATCTTCAGATTATTGGTACAGTTCTAGAGGATCAAGATTACTTGGAGAAGATAACCAAGTTACAAGGTTACCTCGATGAGGTGAAGAAGATTGTGAGTGAAAGCTGTTCCCAAGAGGTTTTAGAACTGGCGTTGGACTCCATCTCATCCCTAATTACCATCCTCTCCTCCATGTCATCGTCTACCAAACTCCATTCTTCACTTTGA

Protein sequence

MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLITILSSMSSSTKLHSSL*
Homology
[Close]
BLAST of CsaV3_7G033830 vs. NCBI nr
Match: KGN45427.1 (hypothetical protein Csa_016056 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 5.3e-28
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60
          MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT
Sbjct: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60

Query: 61 ILSSMSSSTKLHSSL 76
          ILSSMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]
BLAST of CsaV3_7G033830 vs. NCBI nr
Match: XP_016902860.1 (PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like [Cucumis melo] >KAA0059347.1 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 5.0e-26
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60
          MEAKVL DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLE+AL+SISSLIT
Sbjct: 1  MEAKVLVDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALNSISSLIT 60

Query: 61 ILSSMSSSTKLHSSL 76
          ILSSMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]
BLAST of CsaV3_7G033830 vs. NCBI nr
Match: KAG7025939.1 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 103.2 bits (256), Expect = 1.0e-18
Identity = 61/78 (78.21%), Postives = 68/78 (87.18%), Query Frame = 0 

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60
          MEA++ DD QIIG   EDQDYLEKITKLQGYLDEVKKIV ESCS+EVLE+AL S+SSLI+
Sbjct: 1  MEAEISDD-QIIGKAFEDQDYLEKITKLQGYLDEVKKIVRESCSEEVLEVALSSVSSLIS 60

Query: 61 ILSSMSSS---TKLHSSL 76
          ILSSM+SS   TKLHSSL
Sbjct: 61 ILSSMASSSSFTKLHSSL 77

[Close]
BLAST of CsaV3_7G033830 vs. NCBI nr
Match: KAG6593594.1 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-14
Identity = 53/78 (67.95%), Postives = 63/78 (80.77%), Query Frame = 0 

Query: 1   MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60
           +  ++L++       L +QDYLEKITKLQGYLDEVKKIV ESCS+EVLE+AL S+SSLI+
Sbjct: 344 LSVEILENFWCCLCSLSNQDYLEKITKLQGYLDEVKKIVRESCSEEVLEVALSSVSSLIS 403

Query: 61  ILSSM---SSSTKLHSSL 76
           ILSSM   SSSTKLHSSL
Sbjct: 404 ILSSMASSSSSTKLHSSL 421

[Close]
BLAST of CsaV3_7G033830 vs. NCBI nr
Match: PKA60658.1 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Apostasia shenzhenica])

HSP 1 Score: 66.2 bits (160), Expect = 1.4e-07
Identity = 34/66 (51.52%), Postives = 50/66 (75.76%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLITILSSMSS 67
           D + I  ++EDQDY+ K+ +LQ Y+D+VKKIV   CSQEVL++AL S++S++ ILS MS 
Sbjct: 457 DSKTISLLVEDQDYMGKVKELQAYIDKVKKIVKPGCSQEVLKVALSSMASVVDILSVMSP 516

Query: 68  STKLHS 74
            +K H+
Sbjct: 517 PSKSHN 522

[Close]
BLAST of CsaV3_7G033830 vs. ExPASy Swiss-Prot
Match: Q9C9K3 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arabidopsis thaliana OX=3702 GN=PFP-ALPHA2 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.4e-07
Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLITILSSMSS 67
           D + +   +EDQDY+ KI KLQ YLD+V+ IV   CSQ+VL+ AL  ++S+  +L+++SS
Sbjct: 549 DAKAVSLCVEDQDYMGKIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 608

Query: 68  ST 70
           S+
Sbjct: 609 SS 610

[Close]
BLAST of CsaV3_7G033830 vs. ExPASy Swiss-Prot
Match: P21342 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum OX=4113 GN=PFP-ALPHA PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 7.0e-07
Identity = 29/64 (45.31%), Postives = 45/64 (70.31%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLITILSSMSS 67
           D + +   +EDQDY+ +I KLQ YLD+V+ IV   CSQ+VL+ AL +++S+  ILS +SS
Sbjct: 549 DAKAVSLCVEDQDYIGRIKKLQEYLDKVRTIVKPGCSQDVLKAALSAMASVTDILSVISS 608

Query: 68  STKL 72
            + +
Sbjct: 609 PSSV 612

[Close]
BLAST of CsaV3_7G033830 vs. ExPASy Swiss-Prot
Match: Q9SYP2 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arabidopsis thaliana OX=3702 GN=PFP-ALPHA1 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-06
Identity = 27/61 (44.26%), Postives = 44/61 (72.13%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLITILSSMSS 67
           D + +   +EDQDY+ +I KLQ YLD+V+ IV   CSQ+VL+ AL  ++S+  +L+++SS
Sbjct: 551 DAKAVSLCVEDQDYMGRIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 610

Query: 68  S 69
           +
Sbjct: 611 N 611

[Close]
BLAST of CsaV3_7G033830 vs. ExPASy Swiss-Prot
Match: Q41140 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis OX=3988 GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-06
Identity = 30/62 (48.39%), Postives = 44/62 (70.97%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLITILSSMSS 67
           D + I   +EDQDY+ +I KLQ YLD+V+ IV   CSQEVL+ AL  ++S+  +L +MSS
Sbjct: 549 DAKPITLCVEDQDYMGRIKKLQEYLDKVRTIVKPGCSQEVLKAALSVMASVTDVLLTMSS 608

Query: 68  ST 70
           ++
Sbjct: 609 TS 610

[Close]
BLAST of CsaV3_7G033830 vs. ExPASy TrEMBL
Match: A0A0A0KAL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447890 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.6e-28
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60
          MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT
Sbjct: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60

Query: 61 ILSSMSSSTKLHSSL 76
          ILSSMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]
BLAST of CsaV3_7G033830 vs. ExPASy TrEMBL
Match: A0A5A7UXI5 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00720 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60
          MEAKVL DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLE+AL+SISSLIT
Sbjct: 1  MEAKVLVDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALNSISSLIT 60

Query: 61 ILSSMSSSTKLHSSL 76
          ILSSMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]
BLAST of CsaV3_7G033830 vs. ExPASy TrEMBL
Match: A0A1S4E4F9 (pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like OS=Cucumis melo OX=3656 GN=LOC103500631 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 1  MEAKVLDDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLIT 60
          MEAKVL DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLE+AL+SISSLIT
Sbjct: 1  MEAKVLVDLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLEVALNSISSLIT 60

Query: 61 ILSSMSSSTKLHSSL 76
          ILSSMSSSTKLHSSL
Sbjct: 61 ILSSMSSSTKLHSSL 75

[Close]
BLAST of CsaV3_7G033830 vs. ExPASy TrEMBL
Match: A0A2I0AYQ0 (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Apostasia shenzhenica OX=1088818 GN=PFP-ALPHA PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.6e-08
Identity = 34/66 (51.52%), Postives = 50/66 (75.76%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLITILSSMSS 67
           D + I  ++EDQDY+ K+ +LQ Y+D+VKKIV   CSQEVL++AL S++S++ ILS MS 
Sbjct: 457 DSKTISLLVEDQDYMGKVKELQAYIDKVKKIVKPGCSQEVLKVALSSMASVVDILSVMSP 516

Query: 68  STKLHS 74
            +K H+
Sbjct: 517 PSKSHN 522

[Close]
BLAST of CsaV3_7G033830 vs. ExPASy TrEMBL
Match: A0A5B7B4K3 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_032996 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 8.6e-08
Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 0 

Query: 13  GTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLITILSSMSSSTKLH 72
           G  L++ DY+ KI +LQ Y+D+VKKIV   CSQ VLE+AL S+SSL+ +LS MSS  KL 
Sbjct: 130 GLCLQEHDYIGKIKELQVYIDKVKKIVKPGCSQVVLEVALSSMSSLVEVLSVMSSKQKLQ 189

Query: 73  SSL 76
           SSL
Sbjct: 190 SSL 192

[Close]
BLAST of CsaV3_7G033830 vs. TAIR 10
Match: AT1G76550.1 (Phosphofructokinase family protein )

HSP 1 Score: 55.8 bits (133), Expect = 1.7e-08
Identity = 29/62 (46.77%), Postives = 45/62 (72.58%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLITILSSMSS 67
           D + +   +EDQDY+ KI KLQ YLD+V+ IV   CSQ+VL+ AL  ++S+  +L+++SS
Sbjct: 549 DAKAVSLCVEDQDYMGKIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 608

Query: 68  ST 70
           S+
Sbjct: 609 SS 610

[Close]
BLAST of CsaV3_7G033830 vs. TAIR 10
Match: AT1G20950.1 (Phosphofructokinase family protein )

HSP 1 Score: 53.5 bits (127), Expect = 8.5e-08
Identity = 27/61 (44.26%), Postives = 44/61 (72.13%), Query Frame = 0 

Query: 8   DLQIIGTVLEDQDYLEKITKLQGYLDEVKKIVSESCSQEVLELALDSISSLITILSSMSS 67
           D + +   +EDQDY+ +I KLQ YLD+V+ IV   CSQ+VL+ AL  ++S+  +L+++SS
Sbjct: 551 DAKAVSLCVEDQDYMGRIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLTTISS 610

Query: 68  S 69
           +
Sbjct: 611 N 611

The following BLAST results are available for this feature:
BLAST of CsaV3_7G033830 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45427.15.3e-28100.00hypothetical protein Csa_016056 [Cucumis sativus][more]
XP_016902860.15.0e-2696.00PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alph... [more]
KAG7025939.11.0e-1878.21Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Cucurbit... [more]
KAG6593594.11.1e-1467.95Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, partial ... [more]
PKA60658.11.4e-0751.52Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Apostasi... [more]
BLAST of CsaV3_7G033830 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C9K32.4e-0746.77Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 OS=Arab... [more]
P213427.0e-0745.31Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanu... [more]
Q9SYP21.2e-0644.26Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 1 OS=Arab... [more]
Q411401.2e-0648.39Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinu... [more]
BLAST of CsaV3_7G033830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAL42.6e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447890 PE=4 SV=1[more]
A0A5A7UXI52.4e-2696.00Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like OS... [more]
A0A1S4E4F92.4e-2696.00pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2-like OS... [more]
A0A2I0AYQ06.6e-0851.52Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Aposta... [more]
A0A5B7B4K38.6e-0858.73Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_032996... [more]
BLAST of CsaV3_7G033830 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G76550.11.7e-0846.77Phosphofructokinase family protein [more]
AT1G20950.18.5e-0844.26Phosphofructokinase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR43650:SF14PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE SUBUNIT ALPHAcoord: 10..73
NoneNo IPR availablePANTHERPTHR43650PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASEcoord: 10..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G033830.1CsaV3_7G033830.1mRNA